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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0295300 |
| Transcript ID | LotjaGi4g1v0295300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein clpB; TAIR: AT5G57710.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FHH2|SMAX1_ARATH Protein SUPPRESSOR OF MAX2 1; TrEMBL-Plants: tr|V7CBT6|V7CBT6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0295300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66838183..66843230) extracted from Lotus japonicus Gifu genome v1.2.
CGAAAAGGTGAGCAGATTGCTCTGTCCACCAAGCATATTTTTCCAGAAATCTTTGCAACCGAGATAGATAGTACTTCCAT CCATCCATCAATTCTCCGTTTACTAGAAATTCTCTGTCTTTCTTTTGCCACAATAGTATCTCTTTTCTTAATTAATTATC TCCTTTATCTTTTTCCTCCGCACTGCACCGATAATTAAAAACAAATAGAATAATAATTAGCTTCAAAGTTCACTCAAATT ACCTTTACTTTACTGAGTTCATGCGCTCTGTAAAATACAAACGAGTTAGCTTTATATTCACAATCACCACTCATGTTCGT GTGAAGAAGAGGTTCTGAAATATCCTTTTCGCGTTGAATTCCCAACTAGCTTTTTGGGAGAGAAATAGAAAGGAAGTGAA GGAGAGGGAGGGAAAAAAGAAGATAGATCGCGTAAAGTAAGAGAAGCCATATTACTTTGCTGATTTTTGTTTGTGTTTGT AAAAAGCTTGTTTTGATTGTTTTGCCAACCCAACCACAACCCCAACCCCTTGAAAATGTGAATTTGTCTATATTGAAGTG GTTCTTATCTTATCTCACCTCACCACATACTACTAATTTCGTTTTCTCTCCCTTGTGGACACTTTCTCTTAGCCTTACCA CCAAAACAAGTGTAAGTTTCACACACATTCTTTTTCTCACCTCCCATAAAGTCAAGTAACTACTCCTTCCCTCACCTTCA AACAAACAAAAACACAACGACAACGACATAGGTGGTGCTTCTCTCTGATAAGATTCATTTCTTTTTTTTCTTCTCCAATT CAATACAATTCCAATTCAACCAAGAGCCGAAATCACAAACAAATTCTCAGCAAGTTTCAATTATTGATCAAACTGGTGAA TTTGTTGATCGGGGACAAGAGTGTTTAGAATTATTCACTGGGGAAATGAGAGCGGGTCTCAGCACCATCCAGCAAACCCT AACGCCGGAAGCGGCGAATGTTCTCAACCATTCAATCGCAGAGGCCGGACGCCGGAACCACGGCCAAACCACGCCGCTTC ATGTGGCGGCGACGCTTCTAGCTTCGCCGTCTGGTTACCTCCGTCAAGCCTGTATAAAATCTCATCCCAATTCCTCTCAT CCGCTCCAGTGCAGAGCACTGGAGCTCTGTTTCAGCGTCGCCCTGGAGCGGTTGCCGACGTCGCAGAGTAGTAGCCCCGG CATGGAGCCTCCAATCTCCAATGCTTTGATGGCGGCCTTGAAGCGCGCTCAGGCTCACCAGCGGCGGGGTTACCCGGAGC AGCAGCAGCAGCCGCTCCTCGCCGTCAAGGTGGAGCTCGAGCAGTTAATCATATCAATTCTCGATGACCCGAGTGTTAGC AGGGTGATGAGAGAAGCGAGTTTCTCTAGTCCTGCGGTTAAAGCCACCATCGAACAGTCGCTGAATTCGGTTCCTTCCGC CGTGAATTCCAGCTCCATCGGATTGGGGTTCCGGCCGAGCGCCGTCACGCCGGCTACCGCGCCGAGCAGGAATTTGTACC TGAATCCGCGGCTGCAGCAGGGGAACGCCGGCGGTGGCGGTGGCGGCGGGCAGAGGGGTGAGGAGGTGAAACGGGTGGTG GATATATTGCTGAGGAGCAAGAAGAGGAACCCGATCTTGGTGGGTGAATCAGAGCCGGAGGCGGCAATCAAGGAGGTGTT GAGGAAGATTGAGAACAAGGAATTGGGGGAAGGGGTTTTCAGCAATGGCCATGTGATTCATTTGGAGAAGGAGCTTCCTT CCGACAGGGCGCAGATTCCGGCGAGGCTGAAGGAGTTGGGGGATTTGATTGAGACCCGTTCCGGTGGCGTTTTCATCAAT TTGGGTGACTTGAAATGGCTGGTGGAGGGGTTTGGGGTTGGTGGTTTGGGGAATATGCAGCAACCGACGCTCGCCGACGC TGGAAGAGCTGCGGTTGCGGAGATGGGTAAATTGGTTGCCAAGTTTGGTGCTACCAGACTTTGGTTGTTGGGTACTGCTA CTTGTGAGACTTACTTGAGGTGTCAGGTTTATCATCCTTCCATGGAAAATGATTGGGATCTTCAGGCAGTGCCAATTACA ACCAGAGCACCTCTTCCTGGAATGTTTCCAAGGTAATTTTTCTGTTTCCTTGTTTCTCACAATTGAATTTGATCCATATT GGATCATGTTGTTTTTTGGATGTCTGATTATTTAATTGAAGTAATTGATTGCTGAAGGAGAACTAGTCTGGTGTTTGAAG GATCTTCAACTAATATTTATCTTTTCTGAGATTTAGTCTTGTTTCACTACTTTGATTCAAGTGATCTGCTCTGTTGCAAG ATCAAATAAAGTTAGTAATGTCAATGTTTGAAGGTTTGGAATTAAAAATTATTCTTCAAGGAATCAATTAAGTGTGAAAT TAGAGAATCTTATAAACATGGGATGTTCCTGTTTCCAAAGACACTGTTATAAGACAGGAGAATACTATGTATTTAGCTTG TCTTCAACTATTGCACTTTTGGCTGTTTAGCACTATTAGGTTGATTATGCTCTGAAAATGGTTAAATCTGTACCCCCGCC ATTTTGTATTATCGGGTAACCATTTTACCTTCTTGTGACCAGGCTTGGGACCAACGGAATTCTTGGTACAACACTTGAGT CTATGTCCCCTTTAAAGGCCCTGCAAACCACAGCAATCACTCCACTCAGGCGTGCCTCCGAGAATGTAGATCCTGCTGCA GTTTCAACTTGTTGTCCCCAGTGTATGCGGAACTACGAGCAAGAAGTAGCAGAAATGTTGAAAGAAACTGAGAAATCTGA TTCTGAGATCAAATCAGAGGCAGCTCGCCCGCCCCTTCCACAGTGGCTGCAGAATGCTAGAACTAATAATGATAATGCTA AAGCAACGGATCAGGCTCAGGTAAATTTCATTACTAAAAAGACAATGCATTTACATTTTTCGTTTGTGGGGGTTCCTAGA AAATATTGACCTTTCTTAACTGTTGTGTTCCTTTGTCTTTCAATAGAGTAACAGCCCAGAAATGAATGTGAAGAGGAGGA CTCAAGAAATACAAAAGAAATGGCATGATGCCTGCTTGAGTTTACATCCTAAATTTCATCAACAAAATGTGAGCACAGAG AGATTGACTCCCATTCCTTTTGCAATGACTGGCCTATGTAATGTGAACTTGCTGGGGCGCCAATTTCAACCTAAAGTGCC TGTTAATAAAAATCTAGGAACCTGTCTGCAATTGAGCTCAAACCCAATGTCTATTCAGCCACCAGAATGGCCGGTGAGCC CACGGCGAAGTCCAGTTAGAACGGAGCTGGTCCTCGGGCAAACAAAGCTAGCTAATCCAACTCCAGAAGAAGTTACACAG AAAGAACGCACTGATGACTTCTTGGGGTGCCTGTCTTCAGAGTCACAGGACAAGTTTGATGTATTACAGAGCAAAAAACT CCTTGATGCCGACTCTTTCAAGCAGCTCCGTAAAGTCCTGACAGAGAAGGTGTGGTGGCAGCAGGATGCAGCATCTGCAG TGGCTACCACAGTAACACAGTGCAAAATGGGCAATGGAAAACGACGCTCAAAAGGTGACACGTGGTTACTGTTCGTGGGT CCTGACAGAATCGGTAAGAAGAAAATGGCAGCGGCACTTTCCGAGCTTGTATCTGGTTCCAACCCAATCACAATATCTCT CGGGCAACGGCGTGGGGATGTAGGAGACTCTGAAGTTAACCATCTCCGTGGAAAAACAGCATTTGATCGGATTGCTGAGG CCATCAGAAGGAACCCACGTTCTGTCATCATGCTTGAGGACATTGATGAAGCCAACACCCTCCTCCGTGGGAGCATCAAA AGAGCCATGGAGCAAGGGAGGTTCCCAGATTCTCACGGGCGTGAAATCAGCCTCGGGAATGTCATGTTCATCCTCACTGC AAATTGGTTGCCAGAGGACCTGAGATACCTCTCCAATGGCACCCCACTTGATGAAGAAAAGCTCGCAAATTTCGCCAGTG GGGATTGGCAACTGCGGCTATCAGTGGCTAAGAGAGCATCAAAACGCAGACCCAGTTGGTTATCCGATGAAGACAGGTCT TTGAAGCCACGAAAGGAAATCAATTCAGGGTTATCATTTGATCTCAATGAAGCCGCTGCCGATATTGCAGAGGAAGACAG GGCAGACGGATCACATTCACATAATTCCAGTGACTTCACAGTGGATCATGAAGACAACAGCAACAACCACCTCGATGGGG GAGGATCAAGCTCCATAATACCTCGTGAGTTACTGGATTCTGTGGATGATGCCATTGTCTTCAAGCCATTGAATTTCGAC CTTCTTCGCCGGAATTTCAAGGCGTCAATCTCAAAGAGGTTCTCTGCCGTGGTGGGTAGTGGGATCTCAATTGAAGTGCA GGAGGATGCTCTTGACAAGATTGCCAGTGGAGTGTGGTTAGGCCAAACCACCATAGATGAATGGATGGACAAGGTGTTGG TTCCCACCTTCCAGCAGCTGAAAAAGCAGAACTTCAATACAAACACCAATCATGACAATGAGTCTTGTTCGCTGCTGGTT AGGCTGGAAGATGATGATGGCTACTCCGATCGCCGCAGTAACCAAGAATGGTTACCTGGTAGTGTGAGACTGGTGGCGGA ACAGTGTTGAACTTGAATATAGGAGGATGTTGTGATTAGTATTGAAACATAAGGGACATGAGTGGTAATATCCGTTTTTG TTGGTGATAGAAATGTAAATAGACCACTTTGGCAGGGGAAAACAAAGTCAAAGGCTCTTTGTAGAAGAACCATGAAAAAA CCGTTAGAACAAGGGTCGGGATGTGTCCATTTTTTTTCTTCTTCTTAGAAAAAGATTAATTAATTTTTGCGTTTATAAAG TTTATATTGTTTTATTGTAAGCAAAGATATATTTATTAATTAAACGGAGAATGATGATTATATTAATAAAATGGAGCTCT GGTTCCTGTTTTCTCGAATCCTTCATCCCTTTTTCACATTTTATAATCTTTCTCTACCTAATGCTGCTTGAAAAATACAC AGCAGAAT
CDS sequence (LotjaGi4g1v0295300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGCGGGTCTCAGCACCATCCAGCAAACCCTAACGCCGGAAGCGGCGAATGTTCTCAACCATTCAATCGCAGAGGC CGGACGCCGGAACCACGGCCAAACCACGCCGCTTCATGTGGCGGCGACGCTTCTAGCTTCGCCGTCTGGTTACCTCCGTC AAGCCTGTATAAAATCTCATCCCAATTCCTCTCATCCGCTCCAGTGCAGAGCACTGGAGCTCTGTTTCAGCGTCGCCCTG GAGCGGTTGCCGACGTCGCAGAGTAGTAGCCCCGGCATGGAGCCTCCAATCTCCAATGCTTTGATGGCGGCCTTGAAGCG CGCTCAGGCTCACCAGCGGCGGGGTTACCCGGAGCAGCAGCAGCAGCCGCTCCTCGCCGTCAAGGTGGAGCTCGAGCAGT TAATCATATCAATTCTCGATGACCCGAGTGTTAGCAGGGTGATGAGAGAAGCGAGTTTCTCTAGTCCTGCGGTTAAAGCC ACCATCGAACAGTCGCTGAATTCGGTTCCTTCCGCCGTGAATTCCAGCTCCATCGGATTGGGGTTCCGGCCGAGCGCCGT CACGCCGGCTACCGCGCCGAGCAGGAATTTGTACCTGAATCCGCGGCTGCAGCAGGGGAACGCCGGCGGTGGCGGTGGCG GCGGGCAGAGGGGTGAGGAGGTGAAACGGGTGGTGGATATATTGCTGAGGAGCAAGAAGAGGAACCCGATCTTGGTGGGT GAATCAGAGCCGGAGGCGGCAATCAAGGAGGTGTTGAGGAAGATTGAGAACAAGGAATTGGGGGAAGGGGTTTTCAGCAA TGGCCATGTGATTCATTTGGAGAAGGAGCTTCCTTCCGACAGGGCGCAGATTCCGGCGAGGCTGAAGGAGTTGGGGGATT TGATTGAGACCCGTTCCGGTGGCGTTTTCATCAATTTGGGTGACTTGAAATGGCTGGTGGAGGGGTTTGGGGTTGGTGGT TTGGGGAATATGCAGCAACCGACGCTCGCCGACGCTGGAAGAGCTGCGGTTGCGGAGATGGGTAAATTGGTTGCCAAGTT TGGTGCTACCAGACTTTGGTTGTTGGGTACTGCTACTTGTGAGACTTACTTGAGGTGTCAGGTTTATCATCCTTCCATGG AAAATGATTGGGATCTTCAGGCAGTGCCAATTACAACCAGAGCACCTCTTCCTGGAATGTTTCCAAGGCTTGGGACCAAC GGAATTCTTGGTACAACACTTGAGTCTATGTCCCCTTTAAAGGCCCTGCAAACCACAGCAATCACTCCACTCAGGCGTGC CTCCGAGAATGTAGATCCTGCTGCAGTTTCAACTTGTTGTCCCCAGTGTATGCGGAACTACGAGCAAGAAGTAGCAGAAA TGTTGAAAGAAACTGAGAAATCTGATTCTGAGATCAAATCAGAGGCAGCTCGCCCGCCCCTTCCACAGTGGCTGCAGAAT GCTAGAACTAATAATGATAATGCTAAAGCAACGGATCAGGCTCAGAGTAACAGCCCAGAAATGAATGTGAAGAGGAGGAC TCAAGAAATACAAAAGAAATGGCATGATGCCTGCTTGAGTTTACATCCTAAATTTCATCAACAAAATGTGAGCACAGAGA GATTGACTCCCATTCCTTTTGCAATGACTGGCCTATGTAATGTGAACTTGCTGGGGCGCCAATTTCAACCTAAAGTGCCT GTTAATAAAAATCTAGGAACCTGTCTGCAATTGAGCTCAAACCCAATGTCTATTCAGCCACCAGAATGGCCGGTGAGCCC ACGGCGAAGTCCAGTTAGAACGGAGCTGGTCCTCGGGCAAACAAAGCTAGCTAATCCAACTCCAGAAGAAGTTACACAGA AAGAACGCACTGATGACTTCTTGGGGTGCCTGTCTTCAGAGTCACAGGACAAGTTTGATGTATTACAGAGCAAAAAACTC CTTGATGCCGACTCTTTCAAGCAGCTCCGTAAAGTCCTGACAGAGAAGGTGTGGTGGCAGCAGGATGCAGCATCTGCAGT GGCTACCACAGTAACACAGTGCAAAATGGGCAATGGAAAACGACGCTCAAAAGGTGACACGTGGTTACTGTTCGTGGGTC CTGACAGAATCGGTAAGAAGAAAATGGCAGCGGCACTTTCCGAGCTTGTATCTGGTTCCAACCCAATCACAATATCTCTC GGGCAACGGCGTGGGGATGTAGGAGACTCTGAAGTTAACCATCTCCGTGGAAAAACAGCATTTGATCGGATTGCTGAGGC CATCAGAAGGAACCCACGTTCTGTCATCATGCTTGAGGACATTGATGAAGCCAACACCCTCCTCCGTGGGAGCATCAAAA GAGCCATGGAGCAAGGGAGGTTCCCAGATTCTCACGGGCGTGAAATCAGCCTCGGGAATGTCATGTTCATCCTCACTGCA AATTGGTTGCCAGAGGACCTGAGATACCTCTCCAATGGCACCCCACTTGATGAAGAAAAGCTCGCAAATTTCGCCAGTGG GGATTGGCAACTGCGGCTATCAGTGGCTAAGAGAGCATCAAAACGCAGACCCAGTTGGTTATCCGATGAAGACAGGTCTT TGAAGCCACGAAAGGAAATCAATTCAGGGTTATCATTTGATCTCAATGAAGCCGCTGCCGATATTGCAGAGGAAGACAGG GCAGACGGATCACATTCACATAATTCCAGTGACTTCACAGTGGATCATGAAGACAACAGCAACAACCACCTCGATGGGGG AGGATCAAGCTCCATAATACCTCGTGAGTTACTGGATTCTGTGGATGATGCCATTGTCTTCAAGCCATTGAATTTCGACC TTCTTCGCCGGAATTTCAAGGCGTCAATCTCAAAGAGGTTCTCTGCCGTGGTGGGTAGTGGGATCTCAATTGAAGTGCAG GAGGATGCTCTTGACAAGATTGCCAGTGGAGTGTGGTTAGGCCAAACCACCATAGATGAATGGATGGACAAGGTGTTGGT TCCCACCTTCCAGCAGCTGAAAAAGCAGAACTTCAATACAAACACCAATCATGACAATGAGTCTTGTTCGCTGCTGGTTA GGCTGGAAGATGATGATGGCTACTCCGATCGCCGCAGTAACCAAGAATGGTTACCTGGTAGTGTGAGACTGGTGGCGGAA CAGTGTTGA
Protein sequence (LotjaGi4g1v0295300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRAGLSTIQQTLTPEAANVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSHPNSSHPLQCRALELCFSVAL ERLPTSQSSSPGMEPPISNALMAALKRAQAHQRRGYPEQQQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKA TIEQSLNSVPSAVNSSSIGLGFRPSAVTPATAPSRNLYLNPRLQQGNAGGGGGGGQRGEEVKRVVDILLRSKKRNPILVG ESEPEAAIKEVLRKIENKELGEGVFSNGHVIHLEKELPSDRAQIPARLKELGDLIETRSGGVFINLGDLKWLVEGFGVGG LGNMQQPTLADAGRAAVAEMGKLVAKFGATRLWLLGTATCETYLRCQVYHPSMENDWDLQAVPITTRAPLPGMFPRLGTN GILGTTLESMSPLKALQTTAITPLRRASENVDPAAVSTCCPQCMRNYEQEVAEMLKETEKSDSEIKSEAARPPLPQWLQN ARTNNDNAKATDQAQSNSPEMNVKRRTQEIQKKWHDACLSLHPKFHQQNVSTERLTPIPFAMTGLCNVNLLGRQFQPKVP VNKNLGTCLQLSSNPMSIQPPEWPVSPRRSPVRTELVLGQTKLANPTPEEVTQKERTDDFLGCLSSESQDKFDVLQSKKL LDADSFKQLRKVLTEKVWWQQDAASAVATTVTQCKMGNGKRRSKGDTWLLFVGPDRIGKKKMAAALSELVSGSNPITISL GQRRGDVGDSEVNHLRGKTAFDRIAEAIRRNPRSVIMLEDIDEANTLLRGSIKRAMEQGRFPDSHGREISLGNVMFILTA NWLPEDLRYLSNGTPLDEEKLANFASGDWQLRLSVAKRASKRRPSWLSDEDRSLKPRKEINSGLSFDLNEAAADIAEEDR ADGSHSHNSSDFTVDHEDNSNNHLDGGGSSSIIPRELLDSVDDAIVFKPLNFDLLRRNFKASISKRFSAVVGSGISIEVQ EDALDKIASGVWLGQTTIDEWMDKVLVPTFQQLKKQNFNTNTNHDNESCSLLVRLEDDDGYSDRRSNQEWLPGSVRLVAE QC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1037 | 1037 | 0.0 | – | |
| PANTHER | 1 | 1037 | 1037 | 0.0 | – | |
| ProSiteProfiles | 8 | 169 | 162 | 35.217 | – | |
| Gene3D | 9 | 168 | 160 | 3.4E-46 | ||
| SUPERFAMILY | 12 | 163 | 152 | 5.49E-9 | ||
| Coils | 444 | 464 | 21 | - | – | |
| MobiDBLite | 456 | 480 | 25 | - | – | |
| SUPERFAMILY | 642 | 971 | 330 | 1.23E-19 | ||
| CDD | 689 | 801 | 113 | 0.0015933 | – | |
| MobiDBLite | 877 | 902 | 26 | - | – | |
| MobiDBLite | 877 | 909 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein metabolic process | The chemical reactions and pathways involving a protein. Includes protein modification. |
Expression pattern of LotjaGi4g1v0295300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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