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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0300300 |
| Transcript ID | LotjaGi4g1v0300300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SET domain-containing protein, putative; TAIR: AT2G18850.1 SET domain-containing protein; Swiss-Prot: sp|Q9XI84|RBCMT_ARATH [Fructose]-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic; TrEMBL-Plants: tr|I1MSR3|I1MSR3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0300300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67452177..67458145) extracted from Lotus japonicus Gifu genome v1.2.
GGCAACGGATCCATGTTAAGCTTGTACTGCACACCTCATTGATCAACGATCATAACTGAAACTGTTCTGAACCATCAAAG ATGGCAGCTGCATAGCCGTTCGATCCAAACGATTGTGAAGAGCACGAGGGTTGTGCTTCACTCTCATTTCTACTTCTTTT TGCCGCTCAATTTCCCTCTCAGTTGCTTCAGTGGCGGCTTCAGCTCGCAGAGAACGACGAATTCAACCTTTCAGTTTTCA TCTCTCATTCGAGAAGCTCTGAACTCATCGCAATTTCCTCTGGAATCTACTGCGTTCTGGTAATTTCTACCTTGAATTCT GATATCAATTTGTGCTCGTTTGCTGAGAAACTGCAATCGATCGAACAAAAGTTGTAGTCATTTTATTGCATGTAGTTTTC CTCGCAAAGAGCGCGAAAATTCATATCATGCTTCGTTCGCAGATTTGCATATGAATTGGATGTGTTGATATTCATTTCTT ACTCTCTCTGTGTGTGTTCAAACTTTGTGACTGTGTTAAAAATGCTAGAATGTCATTGCTTAGGGTTTGTTCATGATATA AGTGTACAAATTGTGATAAATGCATCTTTGTTTTGTATTGTTTCTGGTTTATATGTGAATGTTACTGAATCTAATACATA TAAATGGTGGAGAAATAAGTAAGTGTGCAAGAATGTGTTGGAATGGAAAATCAGTGGAAAGTGGAAGAGGTTAAGATCTG GTTTTTTTTCATACCTTGAGATTTTGTATTCTAGCATGTTAATGATTAATCAGTTATAGTGATTTTTAAGCGACGAACTG CCGATGGGGAACTTCTGCTTACTTTCTGGTACCGAGAGTTATTACTGACTTCAAACTATTGATTGCAGTTGCCGTCATGG ATACTGATGAGGTGTGCTCAATTGTTCTTGAGTTATCTGAAAAGGATCCTTTATTTGATAAGAAGAAGGTAAGAAATAAT CTAATTGAGTTTTTTTACGTTGCTCAAGTTTATAATAAAATTTTCTTTGTTATGAATTTTCCTTAATCAGTAAAGTAGTT AGAAAGCCTTAAATGATTAAAGAAAATATATGTTGATAGCAAAGATTCCATAATTGTTTCGCATTCAGGAATTTCTCATA TCAAATATATAAAAATTAAGTGACAAATGGCAGAAAACTATTCCAATATGGTTTAAGTTGTAATCCTAAGCAGTTTCCCC TGAACTGACTAATCTGCATCATTTTGTCAGAAATTACTACAATGTAAGGGGTTTAGTCCCAAGGAACGGATATATCTCAA CTCCTCAGAATCTGGTTGGGAGAATGCTACTGCAAAGAGGTTACTTGAGATAGAGCGAATCATACAGTTAAACGAGGTTA CTTCCTCTTCTGCGCTTTGATGCACTCAGTTACTTTTGTGTTTCAACTACTCATGGATTAACTGATTTACTGAGCTTCAG CTGGAACTTTATTTTGCTGAAGACAATGGTTGCACATCAGTGGATTTTTACAGCCCCAGGAATGAGTTGGAGGCGCTCAA TTCAGTTGTCTTTCTCATCGACATATCTCTTTCCAGTTGTTCACATCTCCATACAAATATCCTGCAAGGGCTACGGCAAA CAATGCTTGATTTAATTTCTGACTTTGGAGATAAAAATAGTGTGAAGGGAGTAGTTGAAATAGACCACAATTGTGATCAA GAAGAGCACATGATAGAGTGGGGTGAAAGCAACGGTGTAAAAACACAGTTAAAGATAGCTTGTAAGTTTCATTGTGATTT TATGTCTTTTTCATTTGCTTTCTCATTCGAGAATGATTTTATTTCCTTTTCATAGGTATTAAATTTACTTGATTTTTAAC AGACTTCTTCTCCCTGTAATCTGCACAGATGTTGAAGGAGCAGGTCGGGGTGCGATTGCTACAAAAGATCTAAAAGTTGG AGACATCGCTCTAGAAATTTCTGCGTCCATTATCATTTCTGAGGAGCTTGTGCATGAAACTGATATGGTATGTTTCTTGT TTAAAAAAGTGAAAGTACTTCATGTAGATCTTCTTTAAGAAACCTAGAGTTGACCAACTTTCATTCATTGCAAACAACTA TTAAACAATAATATTATATGTGAAGATTTCCGTACCTTCTTTACACCCATTATGGTGCTTTATTGTTTCAGAGTTGATTT GAAATATAAATACTGAGTTTACACTTCACCTCAGTTATCTTATGTTTTGCAACAATGAATGTCACATAGGATGCTTGTCA ACATGTCTATCCCTACCAAATTGGAGCAACCTCTCTCTCTTAGTTGGGAAGAAGTTGAATATTGATCCCTTTGATTTTCT AAGGAAGTGGATAATTGGATATACATCAGTGAGAGGATTTATTAAAATTAATAAAAAGGAGAAATGTCATATTTCACCTC TCATATAGTCTTGATAACTGATAATTGTCCTCATTGCATTCAGTATCAGGTCCTAAAAATGGTGGATGACATATCATCTG AGACAATATTGCTATTGTGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATATACTTTGACACACTCCCA GAAAAATTTAATACAGGTATTACTTGACTGACATACTTTATATACATACATAGATATAATTGTTCTACAGATTCCCAAAA TTACAAGTCACTTCGATGCACAACCTTTGTAGAACTTACAGGTGCTTTTCCAGGGATTTGAACAATACCTGCAAAACTTA ACTCCAATAATTCAAACGATGTCCTATTGTCTAGGTTTTCTTGTGTGACTACTCTGTCTGTATCTTGAATTCCCCTATTA CCAGTTTCATCATCAACCATTTGGAACTATTTTGAGCAATGCTTTGCAAGAGGGATATACCTTTATGAGTTCGTATAATT GAAAGGATGTACTATTATATAGGTTTTCTTGGGTGATTACTCTGTCTGCGTATTGAATTTCCCGATTGTCAGTTAATCAT CTACCGTCTGGAACTATGTTGAATAATAGCTTTGCAAGAGTCAGATACCTTTATGAGCAGTTGTCCCTATCACTTTTGAT CATTCCATTTATGAGTAGGTATCCCTTTTAGCTCTACGCCTGTAACTTTTCTCCCTAAGTATGCATCTCTATGTTTGATA TCTGTCTGCCTATTTTCCCCCTTTGGTAAATGTTAATCTAATACCCTATTACTCTAAGATATCATCAAGATCATAGTTAT CAATTCAGGATAGTGACGTGTAGTGGCCTACCCCAAAAGTGGTATAGCGTTATAGCTCGGCAAGAATGGTCGTTACGTTG GATTTTTTTTATATAGTTCATATTATTTATACTATATACATATAAATGCTTTAAAATGATAAAATAAATGACCTGAAATT CATGGCATATGCATAATAACAATATCTTTGGTATTTGATTTACAGGATTGAGTTTTGGTATTGAAGCGATTGCAATGTTA GATGGAACCTTGCTATTTGAAGAGATAATGCTGGCAAGACAGGTAATCAGTTGTTACGAGGTTCTGACCTCTATTGTTTT TAGATGGAAGCTCCTCCTTTCTTTGAGGTGTAGAAGAACTATTAAACTACACTTACCACTTACTACTTTATTCAGGATTC AAGTTATTGATATATTTAATAATAATCAATACGAAGCAGAGTATATCTGTGCCCATTGTGGATGATTTTAAAGTTCAAAA CATCTTGAGCCAGAATTCGAAATTACCCTGAAGGCCTAAAGAATGACCACTTAAATACTTTTAATGCTTAAGGTTTCCTG CGTGTAAAGAATGACCTCTATTATGTTCTTTCTTTTTCTTGGCAGCACCTGCATGCTCAATATGATGAGTTGTTTCCTGT TTTGTGTGATGAGTTTCCTGACATATTTCCACGAGAGCTGTACACGCGGGAAAAATTTATATGGGCTTGTGAACTTTGGT ACTCGAATAGCATGAAGATAATGTATCCTGATGGAAAGCTGAGAACATGCTTGATCCCAATTGCTGGCTTTCTTAATCAT TCTGTATGTAAATTCTCTCTTTCTCATGGATGATGTAGTAATTGCATCCAAATTCTCTCTCATTTTTTATTTCCTTTTCT CCTCTTTTGTTTTGAATATTTAGATAAAAGGGTCTTCAAATATTGTGTATTGGTCACTGAATTCAATAAAGAAATTGAAG GTAATGGAATTTAAAAATAAAATGACTGTCACTTACCGTGTTAAGAATATATTCTTCTGGAGCATGGTTGGCATTTCTTA CACCTAGCTGCCTTTTCTGCATATCTAGATTTAGATCATAACTTAGAGTTGATGATTCCCAATTCCCCATAGTTGTTTAT CTCTACAAATTGTTTGTAAATTTCTTGTACCCGCGTTAGCAGTTGTGATATCAACCATGATGTTTGACAATTATCTTCTT TCCTCTGGTTCGTTATAACTGTGGGTTGTACACAATTTACTTTTCTTGTTCATGAAATGCCCAGATTTTATATAGCAATG TATGGAGACCTCTAAATGTTATTGTTCTCATTTCTCTCTTTTTGTTCCTGACAATAGCTGTGCCCACATGTTATGCACTA TGGCAAAGTAGACCCTTCAACAAATTCATTGAGGTTTTGTCTGTCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAA GCTACGGGAGCTTCCCCAGCTCTCATCTACTAACATTTTATGGTTTCTTACCTCAAGGAGAGAACCTGTATGATGTCATT CCCTTAGGTAAGAATATAAGATCATTTCCCAATTCACTTCTCTGCATGCCCATACGCATGCCAGTCAACGTCTTGGAATG TAATGGGTCTTTTGTTGCAAGTTTACTGAGCTGGTGCTGTCTAAGTCAAATATATATGCTAATTGTCATTTGCAGACATT GATGGCTCTGATGTTAATTCTATTGAGGATAAACCTGAGTCCAACTGGACTACACACATGGTGCGCGGTACTTGGCTCTC CAATAATCACAGCATATTTCATTATGGCCTTCCCTCTCCATTACTGGACCATCTTCGGAAATCTCGAAGTCCCACGCTGC ATACTAAGACTTACGTACTGTTCTTTTCTCTCTTTACAATTGAAATTTGTTCTCAGACTTCTATATTTCATGTGTCATCC ATCCGCCTTTTTCTGTAATGAGTTTTACCTAGAGTTTTCAACCTGAAAGTTTTCTATGCATTGCATAATTTGACCTTCTG CAGAGAAAGAAAACACCACATTGCCCTTTACTGCTTGCTCGAACGCATTTTAGGCAAAATTCCTACCACATGTTTTAAAC ATTGCATCTGATTGCTCATCAAATTTTACTTATTCACCATTTTGTGTGCAAAACCTTCTTCTTTCACAGTTGCAAGGTAA CTTAGAAAATGAGCTGGAAGTACTTGGAGATCTCATATGTATCTTTGATAACATGGTGGACAATATGGGTGAGATCGATC TTGATGACAGGTGAAGGCCTTAATTGGTTTTTTGCGGAAAGAAATCATGAAATTTTCTTCTGATAACATTTTTTTTTTAT CCTTTTCAGAGAAAACTGCGGTCTGGAAGAAAAATATGCCATGGATTATAAAAATCTACAAAGAAAAATTGCCTATTCTG TTTCATCTTCATGTCATAACGGTGTCAACTTAGTCAAGAATGAACTGTGCAAGTGCATGGCTGAGGATATCCTAGGTTAA TTGAGCATCTTGGATCATTGTTTGTACCTCATACTCCACCTGGAATATGACCTTTTTGTAAATATAGATAAAATCACCAT GAAATTTTGCTGTCACTAGCTGTGGTTGAGCTTGGTTGCCCCCACTCTATGACACGGGCAGCTCAGCATGTTATTTTAGG TGATGAAATTGATGATTCCGGAATTTTCAGGAAGAAGAAGCTGCTAGCTGTAGCTATTGACGCCACTTATTCTTTTAAAA TTGCTTAAATAAAACTCACCATCTAAATTGCTTAATGCTTACAATGATG
CDS sequence (LotjaGi4g1v0300300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACTGATGAGGTGTGCTCAATTGTTCTTGAGTTATCTGAAAAGGATCCTTTATTTGATAAGAAGAAGAAATTACT ACAATGTAAGGGGTTTAGTCCCAAGGAACGGATATATCTCAACTCCTCAGAATCTGGTTGGGAGAATGCTACTGCAAAGA GGTTACTTGAGATAGAGCGAATCATACAGTTAAACGAGCTGGAACTTTATTTTGCTGAAGACAATGGTTGCACATCAGTG GATTTTTACAGCCCCAGGAATGAGTTGGAGGCGCTCAATTCAGTTGTCTTTCTCATCGACATATCTCTTTCCAGTTGTTC ACATCTCCATACAAATATCCTGCAAGGGCTACGGCAAACAATGCTTGATTTAATTTCTGACTTTGGAGATAAAAATAGTG TGAAGGGAGTAGTTGAAATAGACCACAATTGTGATCAAGAAGAGCACATGATAGAGTGGGGTGAAAGCAACGGTGTAAAA ACACAGTTAAAGATAGCTTATGTTGAAGGAGCAGGTCGGGGTGCGATTGCTACAAAAGATCTAAAAGTTGGAGACATCGC TCTAGAAATTTCTGCGTCCATTATCATTTCTGAGGAGCTTGTGCATGAAACTGATATGTATCAGGTCCTAAAAATGGTGG ATGACATATCATCTGAGACAATATTGCTATTGTGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATATAC TTTGACACACTCCCAGAAAAATTTAATACAGGATTGAGTTTTGGTATTGAAGCGATTGCAATGTTAGATGGAACCTTGCT ATTTGAAGAGATAATGCTGGCAAGACAGCACCTGCATGCTCAATATGATGAGTTGTTTCCTGTTTTGTGTGATGAGTTTC CTGACATATTTCCACGAGAGCTGTACACGCGGGAAAAATTTATATGGGCTTGTGAACTTTGGTACTCGAATAGCATGAAG ATAATGTATCCTGATGGAAAGCTGAGAACATGCTTGATCCCAATTGCTGGCTTTCTTAATCATTCTCTGTGCCCACATGT TATGCACTATGGCAAAGTAGACCCTTCAACAAATTCATTGAGGTTTTGTCTGTCAAGACCATGCAAATCTGGAGAAGAAT GCTGCTTAAGCTACGGGAGCTTCCCCAGCTCTCATCTACTAACATTTTATGGTTTCTTACCTCAAGGAGAGAACCTGTAT GATGTCATTCCCTTAGACATTGATGGCTCTGATGTTAATTCTATTGAGGATAAACCTGAGTCCAACTGGACTACACACAT GGTGCGCGGTACTTGGCTCTCCAATAATCACAGCATATTTCATTATGGCCTTCCCTCTCCATTACTGGACCATCTTCGGA AATCTCGAAGTCCCACGCTGCATACTAAGACTTACTTGCAAGGTAACTTAGAAAATGAGCTGGAAGTACTTGGAGATCTC ATATGTATCTTTGATAACATGGTGGACAATATGGGTGAGATCGATCTTGATGACAGAGAAAACTGCGGTCTGGAAGAAAA ATATGCCATGGATTATAAAAATCTACAAAGAAAAATTGCCTATTCTGTTTCATCTTCATGTCATAACGGTGTCAACTTAG TCAAGAATGAACTGTGCAAGTGCATGGCTGAGGATATCCTAGGTTAA
Protein sequence (LotjaGi4g1v0300300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTDEVCSIVLELSEKDPLFDKKKKLLQCKGFSPKERIYLNSSESGWENATAKRLLEIERIIQLNELELYFAEDNGCTSV DFYSPRNELEALNSVVFLIDISLSSCSHLHTNILQGLRQTMLDLISDFGDKNSVKGVVEIDHNCDQEEHMIEWGESNGVK TQLKIAYVEGAGRGAIATKDLKVGDIALEISASIIISEELVHETDMYQVLKMVDDISSETILLLWSMKEKYNCDSKFKIY FDTLPEKFNTGLSFGIEAIAMLDGTLLFEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMK IMYPDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLSYGSFPSSHLLTFYGFLPQGENLY DVIPLDIDGSDVNSIEDKPESNWTTHMVRGTWLSNNHSIFHYGLPSPLLDHLRKSRSPTLHTKTYLQGNLENELEVLGDL ICIFDNMVDNMGEIDLDDRENCGLEEKYAMDYKNLQRKIAYSVSSSCHNGVNLVKNELCKCMAEDILG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 116 | 115 | 2.0E-6 | ||
| PANTHER | 35 | 540 | 506 | 1.0E-248 | – | |
| PANTHER | 35 | 540 | 506 | 1.0E-248 | – | |
| Gene3D | 145 | 393 | 249 | 4.5E-44 | – | |
| SUPERFAMILY | 148 | 399 | 252 | 1.02E-47 | – | |
| ProSiteProfiles | 161 | 379 | 219 | 9.955 | ||
| Pfam | 172 | 379 | 208 | 1.8E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0300300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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