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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0304900 |
| Transcript ID | LotjaGi4g1v0304900.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT2G19160.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|A6WWG6|ISPH_OCHA4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TrEMBL-Plants: tr|A0A0L9TEV1|A0A0L9TEV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0304900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68035444..68041847) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGGTCCAATGAAATCAATATTGATAATTAATAATAATTCAAGAAAAGGAAGAGCAGAAGAAGGAAAGGAAGGAAGGA CCAGCAGCCAATCGGTGGCTACAGAACGATTTCTCTGTTTCCGAAACCGAATAAACAAACGAAAAAACACAACACAAACA CACACATCACAACATCTTTAACATTAACATTCCATTACATCACTTCGTTCCTTCCCTTCAGAATCGAAAATTTAAACGAC TGCTCTTAAATTCTTATTTTTTCAGAAATTACTATAAAATCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC TTATTCCTTTTGCCCTAGATTGGATTGGATTACATTAGATCTTCGCTCTCCAATCCAATCCTCATCCACATTCGATTCGA GTCACTCTTTCTCCCTTTCCAGGTACTTCTTCTTCTCTCACAATTCCAATTCAACTGTGTATGTGTGTTTCTGTCGAACA ATTATTTTTTTTGTCTTTTTCTGAATTAGGTGAGATTCTTGATGGGTCATGGGTGTGACTACCATTATTTGAATTTCGAA CTAGTTTCGATTTTTTTATTTTCTGTTAAAATTGTTTTAGTTGTTAGGACACTCCAAAACTTGGAATTCAATGGTCCTAT TGTTCAACATGGATTGTTAATTGCTTGTTTTGTGCATTTCCTGTTTCTTTGTCTCCGGAACACTAGTCCTTGTTCCTCAA TGTTGCCATGTATTTAGGAAAAGATAGAATGGTTAGGTGGATATCGGATATCATGTTTAATGATGTCTTTCTCTCTTATT TGATGGCATTATTATCAACATGTGGGTTGTTATGCTATTTGCTTGAAGTGTGGATGTCACTTGTCAGTTTAAGAATGAGT GGAGAAGCTGAATTGTTTGCTAATGCTTTTTGCTTTATGTGTTTTCCGTTTCAGATTTTTGGGCATCGATCGATTTGAGG GTCGTTGTAGGCTATCTATCTATCTGCCCTTGATTTTTGTGTGTTTGAGGGATGGTCTGTGTGGGCAGAAAAGAGATTTG TTGGCGGTGAAAATTGTGATGCGTTTACTTAGATGAAGACAGAAAAAGGCTGGCGTCTAGGCATGGGTGATATGCAGATA TTGCCTGGGTCTCGCCACCGTCCTCCCTTGAAGAGGCCAATGTGGATTCTTGTCTTGGTGCTATTTGTATGCGTCTTTCT AATATGTGCTTATATGTACCCGCCACAAAGCAGATCAACCTGTTATATCTTCTCTTCTAGAGGGTGCAAGGGTTTTGTTG ATTGGCTTCCACCTATTCCTGCAAGAGAATACACAGATGAGGAGATTGCAGCTCGTGTTGTGATTAAGGATATTTTGAGC GCACCGCCAAATGTATCAAAAAAATCAAAAATTGCCTTCATGTTTTTGTCACCTGGTTCACTGCCATTGGAAAAATTGTG GGACAAGTTTTTTCAAGTAAGAATTGGTTAATTGGTTACTTGTTTATTTTTATGTCTTCAAGCTTTGGGAGGCTGTTCAT GTTCCTTTTTGAAATATATCTGTGGCCCTTGTTTAATCACATAGAATATTAGCAGTTTAATAGTATAATTGATACTCTGC AATTTTTCAACCTTCAATAGAAATGGCTTATGGCGTTCTCATATGACACGAAGAGTTCCTATTGGACTTCACCTGTTTGT TTATTATGAGAGTCTTGTATTAGAAGTGTTTGGTAAAAGAAGGCATTGAGTTGTTGTGACTTGGGAGACTTGGAGGATTT CATTCCTTTTATCTGGAAACTGAATTGGAATGATTATTGATTAATAAGAGCTGCTTATTCCACCCTATGCTAGCACTATT TTTTGCATGAAATTTTTCTGTGGTCACTATCTGGAAACTGTTGCCTGATTTAACTTATTAGAGTGACCCATAGTTCAGCA TTTCACATCATTGCCTTTGATAGCAATGGTTAACATGGTAGATATTGCAGTTCTTCCAACATGACTCACGTTCTCATTTC CCCGTTGGATAACAAGTGTTCTTTGAAACCATTGTGACAATGATGTCTTGTCAGCCTTTGGTGCTTGCCTCAAAGTGTTA TTTAGTTTTTAGGGTATGGCATTTAAAATTTCCATTGGCATATAATACAACGCAAGATGTGAAATGTGTTCTACTAATAA ACTATTCATTAATGAAGTGAAAGAATGGACATCCTTAGTTTGCTTTTGTAATTTCATTGGTTTTGTACTTTGTTATCTAT GCTTCTGAGTCCTGTTCATCTTGTAGTGTGCATTTACCTTGAAGATGCTCTCCTCCTTTTATGCAGGGTCATGAAGGGAA GTTCTCAGTTTACGTGCATGCATCCAGAACTAAACCAGTTCATGTGAGCCGTTATTTTGTCAATCGGGATATACGTAGTG ACCAGGTACATATAGTCTTGTTATTATTCACAGTACTATAGTTTGTAAATTATACTGTTTCATGTTTAAATATGTATCCT CTCTTACTGAAATCATACTTTTAATGTATGTATCAATTATCATTTTCCTTAGTCTTGTTATTCTCCTGTTAGCCTTTCTT TAATGGAATAACCTCAGAAGTCAGTAAGTTCAACCTGGGATTGAACTGTGTGAATATGCTCTGTATCTTGAGCAATATTA TATCCTATTTTATTTAGTTATTACTTTTTTTAAAAAATTTCTAAATATTTGCTGCAAGTGTTTTTAACTGTTTTAATTCT AATAATAGCAATACTGCTCTCGCAAGTGTGATTATAATGAACAATCTATAGTTTTCCAATGTGCTGTTCATGTAATCAGA AGTTATCTTGTTGCAGGTGGTGTGGGGGAAAATTTCTATGGTTGATGCCGAGAGACGACTATTGGCTAATGCCCTTCAAG ATCCTGACAACCAGCAATTTGTTTTACTTTCTGATAGGCAAGTGGGTTGAGATTTCTTTTAATTCTGCTCTTGCTGTTTG ATTAGTTTCATTAATATGAGATTTGTTTATATTGTTTTTGCAGCTGTGTGCCTCTATATCATTTTGACTATATTTACAAC TATCTGATGAATGCAAATATCAGCTTTGTAGACTGGTATGTCAAGCACTATTAAATGGGGCCTCCCTCTGGGTTTTTATA GAGTTGATTGGTCTTCTTCTCTCTACTTTTTTGTTTCTAATCCTATGTCCCTTACTAATACAAACTTCCCTTTTTCTTAT TAGCTTTAAGGATCCTGGTCCTGTAGGGAATGGCAGGTATTCAGATCACATGTTACCTGAAATTGAGGTCAAGGACTTCA GAAAGGGTGCTCAGGTATTTTCTTATCTGGGGATTCGATATTTTAAATAGAAAATTTACTTATCATTGTCTGAAGAATGT GTAATTCGAACAAAGTATTTAGGCTACTTTATTCTACAAACACCCTTTTCACAGGACACCAACAGTATACATGGATGGAA GTTGCCATTTTTCCATAACCATTATGTGTGATTTCATACTAGCACGTCAATTATAACACATCAGTAATTGAGTGTTTTGC CATGAAAATGTGGTGATGAATTATTTCTCAATAACAAAAGTAATTATTTTATATTGTATGAAATTCCTTACTCCTATCCT ATACCTTTTCGCATCCCCATCTGGCATTTATTCAGTATCACCATACCTATTTTTTTGAGTGTTAGTCCTCTTATCATCTA AGCCTTGGAAGCTCATTTTTATAAATTTGTAGACCTTTTAGAGATATCTCTCTCTCATTGTTCAACTTCTTCTGCAGTGG TTTTCTATGAAGCGGCAGCATGCTATTATAGTTATGGCTGATAGCCTTTATTACTCGAAATTTCGGACTTACTGTCAGGT GAAGTTCTTTTCAAATATTTTTACCATTAATATTTAAAGCAATGTTGCTTAATATATTAATTATTTTTCCATAGTTGTTT GTTACTTTGTTGATTCAACCATATTCTTTAAATTGTCCTAGTCATCAAGCCAAGCTGAGTCTAGTATTTTTTTTTGAGGT TCAAGATGCTTGGCTTATGACTATGTCTCTCATGCACATCCTAAACAACATATGGATGTTTCATTTTATTACCTCTAATC ATGATTTTTTCTTCAATCATTTTTCTCCAATATGGCTTATGGTTTTTCTACGCATGTTGTGAAAACTTCATGCAAGATTA GGGTACATCTAGTTTGAAAACCATATCTATATTTGTAAAAAAAAACATATCTGACCTGGACACATATCTATGTGGGTAGT AACATTAATGCTCATAACCTTACTTGCTGGGTATATATACCAATAGACTTACCCCTTCCACATTTTAGTTAACTTAATTA TGATCGCATGGTATTGTGTTTGTTTGACAATCTAGTAAAACATGAATGTTATTATAATACTAACATTAATGGTCTGCAAA GGTAGAGCATTGATTAGAAATACAGAGCTGACGTGCTGAATGATGATCATCTTGTTTTCCATTGTTGTGACTCACATTAT AAGGTGTTGGACCATCTAGTTTCCTTATGATAAATTATAATTTTAATTCCTGATGCACACTGCTGTCCAAACTAGGAAGG AAACACCTATTATCCTAGACAGCACACAGAGCTGATGTGTAAATTATCTATATCTAGTGATATGCCCATGGAACTATGAA TTCCCTATTAATGTGAAATTTCTTAATACCACAGCCTGGTTTCGAGGGACGGAATTGCATTGCTGATGAGCATTACTTGC CGACCTTCTTCCAGGTGAGAATTTCAATTGCAATACAAATCTTTTTTTAATAACAAGTTTCAAATCTGTGGCTAATTGGC TTATGCCTCTGGTCTAGATCGTTGACCCTGGTGGAATTGCAAATTGGTCCGTAACTCATGTTGACTGGTCTGAGGGAAAA TGGCATCCAAAATCATATAGGGCACGGGATGTTACTCCTGAGCTTTTGAAGAACATTACGGTATAGTTCTGCTTAAACTG TAACTTCCACAGCAATCTGTATTTATTATTTTTGTCAAGCATGATAGTATCTTTTAAAATTGCCATTAAAATGCAGTTTT GCTTTGAGCATGATAGTTCTAAATTTATAAGGTTAATGGAAAACTAAGTTTAAAGTAGGAAATTTAAAAGAAAATCCTAA AAGTAGGTGGGGACAGTTAGTGTTTGGCCTTTGTGGTTCATTTGTAATGGCGACTCTCTCCTTTTTTAGTTATAGGAGAA CACATTGGACTTTTAGGAAAAGATAAACAGACATCAATTTCCATATTAAAAATGCTATTATTATTTAGTGTACTGCTACA GTATACGACTAAGACTATGCACACCAAGCACGACACTTGTAATCTTAATAACAATTTATGATTTTAAATAAATATAATAA AGCAAATAGTCATTATGTGAAGACAGAACCAGTGTAAATGTACTAAAAGTGCAAGTCGTGCCCATAAAAGGATCATGTCA ATCAGCATTACTCTATTGTTTATTATGATTTTAGTTTAGTCTAGTGTAGTGCAACTGTTCAGGTCTCTGCCTTTTCAATT TGTTTTCATGCTAAGTTTCATGGATATTCACAATAGTTGTTATATTTGCAGTCCGTTGATGTTAGTGTGCACGTCACCAG TGATGAGAAGGTATGTTATAGTCTATATGTGAGCTTTATTGCTCTGTTTTATTGAAAAATGAATTAACCTTCTTGATGAA TTATCTTGTGTTTCTACAGAAAGAAGTGCAGAGATGGCCTTGCTTATGGAATGGGGTTAAGAGGCCATGTTACTTATTTG CTAGGAAATTCACTCCTGAAACACTGGATAGTTTGTTGCATCTATATTCCAATTATTCAACTACACCTTGAGGCACCAGC AGCAGCTACTTTGATCGATTCTTTATCATTTTTGGTCCCCCATCATGGCTTCTCATTTAGCAGGAGAGTTGTAAATTGCA GTATTAATGAGGCTTCATCGCTTGCTAGCCGCAGATATTGTTTGCAAGGTAAACTAGCATCTGATTTAGGGTGGCCTGAC ATGGAGAGGAGGTTAACTATTGGTGTTACTTCCTTAGGGTATAGTTGGATGACTTTGACTTTTTTTTTTCCTTCCATTTT GGGGTTTATAATTACATGGCAAATTTTTGGGGGAAATCATATCAGATCATCTTATGGTTGTAGATCTTTGTAAAACTTTC AAATTGCTTAGTTGGAAAATACATTATATCATTGTCCATTACTCCATTCAGAAATTCATTGGTCAATATGATACTTTGTT TCTGGCCTTTTGTCAGTGTTTGTTTTCCTCCGTTGGTCTATTCATGAGTGAATTTTATCCAATAGTGAGAGAGAGTGACC AGCCTTCACTTTGAAAAGTCACTCTCAGCCCCAAGGATTTTGAAATGGGCTTCAGGCCCACTGAACTCCTCCAGTATTGG CCCT
CDS sequence (LotjaGi4g1v0304900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACAGAAAAAGGCTGGCGTCTAGGCATGGGTGATATGCAGATATTGCCTGGGTCTCGCCACCGTCCTCCCTTGAA GAGGCCAATGTGGATTCTTGTCTTGGTGCTATTTGTATGCGTCTTTCTAATATGTGCTTATATGTACCCGCCACAAAGCA GATCAACCTGTTATATCTTCTCTTCTAGAGGGTGCAAGGGTTTTGTTGATTGGCTTCCACCTATTCCTGCAAGAGAATAC ACAGATGAGGAGATTGCAGCTCGTGTTGTGATTAAGGATATTTTGAGCGCACCGCCAAATGTATCAAAAAAATCAAAAAT TGCCTTCATGTTTTTGTCACCTGGTTCACTGCCATTGGAAAAATTGTGGGACAAGTTTTTTCAAGGTCATGAAGGGAAGT TCTCAGTTTACGTGCATGCATCCAGAACTAAACCAGTTCATGTGAGCCGTTATTTTGTCAATCGGGATATACGTAGTGAC CAGGTGGTGTGGGGGAAAATTTCTATGGTTGATGCCGAGAGACGACTATTGGCTAATGCCCTTCAAGATCCTGACAACCA GCAATTTGTTTTACTTTCTGATAGCTGTGTGCCTCTATATCATTTTGACTATATTTACAACTATCTGATGAATGCAAATA TCAGCTTTGTAGACTGCTTTAAGGATCCTGGTCCTGTAGGGAATGGCAGGTATTCAGATCACATGTTACCTGAAATTGAG GTCAAGGACTTCAGAAAGGGTGCTCAGTGGTTTTCTATGAAGCGGCAGCATGCTATTATAGTTATGGCTGATAGCCTTTA TTACTCGAAATTTCGGACTTACTGTCAGCCTGGTTTCGAGGGACGGAATTGCATTGCTGATGAGCATTACTTGCCGACCT TCTTCCAGATCGTTGACCCTGGTGGAATTGCAAATTGGTCCGTAACTCATGTTGACTGGTCTGAGGGAAAATGGCATCCA AAATCATATAGGGCACGGGATGTTACTCCTGAGCTTTTGAAGAACATTACGTCCGTTGATGTTAGTGTGCACGTCACCAG TGATGAGAAGAAAGAAGTGCAGAGATGGCCTTGCTTATGGAATGGGGTTAAGAGGCCATGTTACTTATTTGCTAGGAAAT TCACTCCTGAAACACTGGATAGTTTGTTGCATCTATATTCCAATTATTCAACTACACCTTGA
Protein sequence (LotjaGi4g1v0304900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTEKGWRLGMGDMQILPGSRHRPPLKRPMWILVLVLFVCVFLICAYMYPPQSRSTCYIFSSRGCKGFVDWLPPIPAREY TDEEIAARVVIKDILSAPPNVSKKSKIAFMFLSPGSLPLEKLWDKFFQGHEGKFSVYVHASRTKPVHVSRYFVNRDIRSD QVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYHFDYIYNYLMNANISFVDCFKDPGPVGNGRYSDHMLPEIE VKDFRKGAQWFSMKRQHAIIVMADSLYYSKFRTYCQPGFEGRNCIADEHYLPTFFQIVDPGGIANWSVTHVDWSEGKWHP KSYRARDVTPELLKNITSVDVSVHVTSDEKKEVQRWPCLWNGVKRPCYLFARKFTPETLDSLLHLYSNYSTTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 20 | 390 | 371 | 9.3E-206 | – | |
| PANTHER | 20 | 390 | 371 | 9.3E-206 | – | |
| Phobius | 30 | 49 | 20 | - | – | |
| TMHMM | 31 | 50 | 20 | - | – | |
| Phobius | 50 | 393 | 344 | - | – | |
| Pfam | 107 | 336 | 230 | 1.7E-81 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0304900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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