Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0306300 |
| Transcript ID | LotjaGi4g1v0306300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase; TAIR: AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A151R7D6|A0A151R7D6_CAJCA Uncharacterized protein C24B11.05; Found in the gene: LotjaGi4g1v0306300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68197559..68201881) extracted from Lotus japonicus Gifu genome v1.2.
CCTCGCCCCACTCTTCAACCGTGAAAACTCATGCCTTTTAGCTACCAAGACACCACTTTCACAATTCATTCTTGCACTCG CCAGCTCTAGAGAATGAAAATGTGAGAGGAGAAGATTTTGAGAACTTTGCATGCTTATGTTAGAGTTTGATTTTGGTTTC AAGCTGCAAGGCAAAAGTGAAGCTTGCAAGAAGAGCAAACCAATGAGCTAGGTTCATAATTAATAAGGTATGTTTGGTGT GGTTGTAGCTAGATAAAGGAGGGGAAAGTCTCAGGTTGGAAAATTTGTCAGCATTTTTAAGATGATAAAATGTCTTCATA TAAATTGCTCAAGCTATATACCCAAGATATATAACCCTCCAGTTTGTCAATTTTATGTGATGATGATTTCTGCATATAAA TGATCACTCTGCATGTTTTGTTTCCTGTTCTACACTTAAGGATGGAAAAGCTTCAAAATGTAGGATTGCATGTGCCATGT TTGTATGCAATTCACCTTGTATGTGGCTGTTTTTCTTGGTGATGCTAAATTAAGGGACTAACTACATGTTTGGATGCAAA GCAAAGAGTACTTATTGGAGCTTATTTATTGCAATTTCTAGCAAAATATCATGATTTATCGTGTCATCAATAATTGCATT GTGAATGTAGATCTAACTTCTGTTCCTGAATACCATACCAATTTCGTGATGGAATATGCAAAATCTGATGCTTACATACA TAATACATTGATACGTATATGGAAGACATAATGAGTTGCTTTCTGTGTTTAGCCGTGTTTAAATTGTACACATGGTTATG GAAGGCAATCAAATAGCTCAATTTACAAAAGAGGTGCATGTTTCTTGTGTCCGGTGAACCTCCATTTTGTGCTGATGCAG CTAGCATATTCTACACTTGAATGATGAAACTTGTTACCAACAAATCATGACACACTTGATAGATAGCGGATAGGGTCCTT TAAGCATGCTGACAATGGTTCGAATCTCGACCTGACCGTGTATATGAAAAATGATTTATTGGGAGAGTCAAAACTCGTTT CGATGATCTTTATCTCTCAAAAGAGATTCTGACTTTTGTCTCAGAACACCCTTTGTGCACAAAGGAAATATTGTATTTCT GTAAAACAAAAACGAAAAATCGGATTTGATTCTTTTATTCAGTCAAACAAAAGGAAAGAAAAACTTGACCAATTAAATTA GCAGCCACTTTCGTTGAGAAGTAAAACTGAAATTGTGATTATCATTGTACAAGTTTCAATGGTGATTGTATTTCAAAATT AAACGTTATTGAAGAAATTAAGTTCATATTATTATATTCATTTTCAAAGATCCTGCTACAGAAGCAACCTTTTATCTTAA CAAACACACTTTTGCAACTTTACACCTCTTGATCCTCCATTCCGCCTGGTCTTTCTCTTGCTTCCTTCAATTCATCTACA TTACTTTCATAGCATTTCTTCTTCATACTCTCTTCGCAAGCCATACGCATCATTGATTGTTTCCTTTCTGGTAATTAACT AATAGCTTCAGGTGTTCTTTCATCCAGTGCATTTTGTTTTTTCTGTCATTGTTCTGAATCCTTCAGCTTTATATTTTCAA TGAACCATGGCTTCATGATCATTGAAACACATCTGACATTAATATGTTGTAATGTTTTGCTTTGAAATTCTCAAAATTCA CTAGCATGGAACAAATTTTGCAATCAAGTACCATAACATAGCTATGTTTTTCACAAATGCACCCCCTTTTTTTTGCAAAA GCCCTGAAGTTCTAAAAATTGAGAATCAAAATGAATTCCCATATAAATTTTAGTAGGTTCAAGTTGTAATGAAACTTAGT GTAGGTTTGGATGAACTCAAAGCCGATCCACATTTAAGTCGATTAGGCAAAATCTTACTTCTCTGTTTGGTATATGTAGG CGCAAACGAAGAACCAAACAGGCACTAAGTTTGTTCACTCTTCTTTGTCCAAGGTTCTCTTGTTGAAATGGAGTATGCTG ACTGCTTCAAACAGCAGGCTAAGAGAACAAAATATGATTGCCTTCTTTTTGGTAAGTTTTGTAATCAGGACATTTTTCAA GTAACAAATTGAAAAAATTCATATTCGAGTATGTTATATAACCATTGAGATTGTTCTACAGATTTAGATGATACTTTGTA TCCCCTCAGTTCTGGTCTTGCAAAAGCATGTCACCAAAATATTAAAGGTAAGCAACTATGTCATACTTGTGCCACAATAT TCACAGTAATTAATGTCTTTTGTAATTGCTGCTTTTTTGGGTATTGACATGAGTGATATCATTAATCTTAGATTACATGG TGGAGAAGCTTGGCATAGAACCAAAGAAAACTGATGAATTGACCAACCTCCTTTACAATAACTATGGAACTACTATTGCT GGCCTAAGGGTCTGATTAATTACCTTGTATTCCTTATTATTTCTAGCTAAATATGGTTTAGATATTAAGTTCTGAAAATG CTGATAACTTTTGTAATTTGTTTTTCATTTTCTATTCAGGCAATTGGATATGACTTTGACTATGATGAATATCACAGGTT CACTTTTTTATTTTTTTCCCCATCACATTCTTAATTATGTTTTTAATCATGTGCATGGTTTTAAATCAAGGTCCGCCATT GTGATTTCGGCCGTAATGTCAAGGTTTTGGAGGTTTCCGAAACCGCAATGCGACCGTGATTACGGCCGGGAAAAACATTT GTTCACAATTTTTCGCAATACGAAGGACCGCAAGGAAACCTGAGTGTGACCGATACCGCGACCACAATTCAAAACCTTGC TCATGTGTTTATTCTGAAATGGTGATAATGATTTTTGAATTTCTGCTTGCAGTTTTATTCATGGGAAATTACCTTATGAG AATTTGAAACCAGACCTGGTTCTGAGGAACTTGTTGCTAAGCCTCCCCTATAGGAAACATGTAAGTTGTTTATAACCAAA ATGGGAATGCATTTCTTTATAAACATGTAAGAGTGGGTTTGTTTTCCAATTGAAAGCACGCTCAACTGGCATATTCGACT CTGCAGTTTTTTCAACTGACCAAAGTTGTTGGATCGAGAAAAACCACATTCACATGCAGCTGTCCAATGGATAAACAAAT ACACTAAGTCTTACTTTTCATTTAATAAGTACCATTTTTGAAACTTCACCAATAGCTTACTTCTCTTGTTTTCTGTCAAT AGATCTTCACAAATGCAGACAAAGTCCATGCAATTAAGGTACTCTGCAGGCTTGGATTAGAAGATTGCTTCGAAGGAATC ACATGCTTTGAGACCCTTAATCCAATTCACAAGAGCATTGCTCTGGATGATGAAGAGAATAACATTGTGTTTGTTGGTTC AAATGGTGCAAGCTGCTCTAAAATCTTTGACATCATAGAGCACTTTGCTCAGCCTGATCCTAGTGCAGACTTGCCAAACA CACCAATTATATCCAAGCCTTCACAGAAAGCCATTGAATTGGCTCTCAAGATAGCCAACCTTAACCCACACAGAACCGTA ACAAAATCTCCCTTTGTGACTTCTATAGTCAAAATTTGTTACCTTCTCCAATATTTTTTTTCAATTTGCTTACATTTTTT ATTTTGTTTCACTATTGTACTTTCAGTTGTTCTTTGAGGACAGTGTCCGCAACATTCAAGCTGGAAAGCGCACGGGTCTT CACACTGTGCTGGTAAGTGTGTGTTTGGATACTAGATCATGTGAATGGATTTTCATCTCAATTCATAAGAAGAATTTTGT CCAGTAGTTTCTGATTGTCACATTGTGCAGGTTGGTACATCCCAGAGAGTGAAAGGTGCAGATTATGCCTTGGAAAGCAT TCACAACCTAAGTGAGGCACTGCCTGAACTATGGGAGGTTGGGATGAAATCAGAAGTTGCATGCCCTGAGAAGCCTGCTG TGGAGACAACAGTCACTGCTTGAGACCATGAAAGGAAGCACTTCTAATCACTGTAAAATAGAATAAAAAGGATAAAGCCG ACCTGGATTCCCCAACTCCTTCAGATGTAGTAACAATAATTGATGTTGATATTTTGTTCAGTTTATAAAAAACTCACTAT GTAAAATAAATTGTCCTTTTCTGTCTTTCTTTACAAAGAATGCATATGATATGACTAGCTAGTTAATTAGAAACTAAAAC AAGATCATGTATGAGAAGTGAATGTCCAATATCTTGAATTGTGATCTTACAATTAAAACTATGATAGGTCAAAAGAACCT AGTGGAAAATATTAGTTTTGAGGCGGGGCACAACAAATCAAATTGTTTGTGAGTAGTGATGCTTTCACAAATTGATGCAA ATT
CDS sequence (LotjaGi4g1v0306300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTATGCTGACTGCTTCAAACAGCAGGCTAAGAGAACAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTT GTATCCCCTCAGTTCTGGTCTTGCAAAAGCATGTCACCAAAATATTAAAGATTACATGGTGGAGAAGCTTGGCATAGAAC CAAAGAAAACTGATGAATTGACCAACCTCCTTTACAATAACTATGGAACTACTATTGCTGGCCTAAGGGCAATTGGATAT GACTTTGACTATGATGAATATCACAGTTTTATTCATGGGAAATTACCTTATGAGAATTTGAAACCAGACCTGGTTCTGAG GAACTTGTTGCTAAGCCTCCCCTATAGGAAACATATCTTCACAAATGCAGACAAAGTCCATGCAATTAAGGTACTCTGCA GGCTTGGATTAGAAGATTGCTTCGAAGGAATCACATGCTTTGAGACCCTTAATCCAATTCACAAGAGCATTGCTCTGGAT GATGAAGAGAATAACATTGTGTTTGTTGGTTCAAATGGTGCAAGCTGCTCTAAAATCTTTGACATCATAGAGCACTTTGC TCAGCCTGATCCTAGTGCAGACTTGCCAAACACACCAATTATATCCAAGCCTTCACAGAAAGCCATTGAATTGGCTCTCA AGATAGCCAACCTTAACCCACACAGAACCTTGTTCTTTGAGGACAGTGTCCGCAACATTCAAGCTGGAAAGCGCACGGGT CTTCACACTGTGCTGGTTGGTACATCCCAGAGAGTGAAAGGTGCAGATTATGCCTTGGAAAGCATTCACAACCTAAGTGA GGCACTGCCTGAACTATGGGAGGTTGGGATGAAATCAGAAGTTGCATGCCCTGAGAAGCCTGCTGTGGAGACAACAGTCA CTGCTTGA
Protein sequence (LotjaGi4g1v0306300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYADCFKQQAKRTKYDCLLFDLDDTLYPLSSGLAKACHQNIKDYMVEKLGIEPKKTDELTNLLYNNYGTTIAGLRAIGY DFDYDEYHSFIHGKLPYENLKPDLVLRNLLLSLPYRKHIFTNADKVHAIKVLCRLGLEDCFEGITCFETLNPIHKSIALD DEENNIVFVGSNGASCSKIFDIIEHFAQPDPSADLPNTPIISKPSQKAIELALKIANLNPHRTLFFEDSVRNIQAGKRTG LHTVLVGTSQRVKGADYALESIHNLSEALPELWEVGMKSEVACPEKPAVETTVTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 295 | 295 | 1.4E-162 | – | |
| PANTHER | 1 | 295 | 295 | 1.4E-162 | – | |
| SFLD | 10 | 276 | 267 | 0.0 | – | |
| SFLD | 10 | 276 | 267 | 0.0 | ||
| SUPERFAMILY | 14 | 273 | 260 | 1.44E-28 | ||
| TIGRFAM | 17 | 246 | 230 | 1.5E-64 | ||
| TIGRFAM | 202 | 246 | 45 | 5.4E-10 | ||
| Pfam | 202 | 246 | 45 | 5.6E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0306300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…