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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR041492
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We have found 32 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.712s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0231100.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT3G48420.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420; TrEMBL-Plants: tr|I3SW77|I3SW77_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0231100 LjG1.1_chr1 54172155 54176433 +
2 domain predictions
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LotjaGi1g1v0483700.1
n.a. Haloacid dehalogenase-like hydrolase family protein; TAIR: AT1G79790.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1; TrEMBL-Plants: tr|I3SMA5|I3SMA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0483700 LjG1.1_chr1 99711960 99721271 -
2 domain predictions
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LotjaGi1g1v0666900.1
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein 3; TAIR: AT2G41250.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5M969|NANP_RAT N-acylneuraminate-9-phosphatase; TrEMBL-Plants: tr|I3T9E2|I3T9E2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0666900 LjG1.1_chr1 122919412 122923647 +
2 domain predictions
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LotjaGi1g1v0748400.1
n.a. NHL repeat-containing protein 2; TAIR: AT1G56500.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2; TrEMBL-Plants: tr|I1NBR0|I1NBR0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0748400 LjG1.1_chr1 132085084 132104635 +
2 domain predictions
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LotjaGi1g1v0748400.2
n.a. NHL repeat-containing protein 2; TAIR: AT1G56500.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2; TrEMBL-Plants: tr|I1NBR0|I1NBR0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0748400 LjG1.1_chr1 132085392 132102731 +
2 domain predictions
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LotjaGi1g1v0748400.3
n.a. NHL repeat-containing protein 2; TAIR: AT1G56500.1 haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2; TrEMBL-Plants: tr|A0A072U549|A0A072U549_MEDTR Haloacid dehalogenase-like hydrolase family protein; Found in the gene: LotjaGi1g1v0748400 LjG1.1_chr1 132085419 132102731 +
2 domain predictions
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LotjaGi1g1v0764100.1
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133684580 133689684 -
2 domain predictions
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LotjaGi1g1v0764100.2
n.a. Riboflavin kinase/fmn hydrolase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|I1KLD6|I1KLD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133684580 133689684 -
2 domain predictions
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LotjaGi1g1v0764100.3
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133684905 133689590 -
2 domain predictions
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LotjaGi2g1v0304800.1
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein 3; TAIR: AT1G14310.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9CYW4|HDHD3_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 3; TrEMBL-Plants: tr|I1J5P8|I1J5P8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304800 LjG1.1_chr2 77816909 77820763 +
2 domain predictions
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LotjaGi2g1v0416700.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|I1LGY1|I1LGY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0416700 LjG1.1_chr2 91452318 91455316 -
2 domain predictions
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LotjaGi2g1v0416700.2
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|I1LGY1|I1LGY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0416700 LjG1.1_chr2 91452318 91455316 -
2 domain predictions
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LotjaGi2g1v0416700.3
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|I1LGY1|I1LGY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0416700 LjG1.1_chr2 91452632 91453699 -
2 domain predictions
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LotjaGi2g1v0416900.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|I1LGX9|I1LGX9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0416900 LjG1.1_chr2 91478943 91481604 -
2 domain predictions
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LotjaGi2g1v0416900.2
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|A0A0B2SBW7|A0A0B2SBW7_GLYSO BON1-associated protein 2; Found in the gene: LotjaGi2g1v0416900 LjG1.1_chr2 91479279 91480356 -
2 domain predictions
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LotjaGi2g1v0416900.3
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|I1LGX8|I1LGX8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0416900 LjG1.1_chr2 91479279 91480416 -
2 domain predictions
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LotjaGi2g1v0416900.4
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9ZVJ5|SGGP_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp; TrEMBL-Plants: tr|A0A0B2SBW7|A0A0B2SBW7_GLYSO BON1-associated protein 2; Found in the gene: LotjaGi2g1v0416900 LjG1.1_chr2 91479279 91480621 -
2 domain predictions
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LotjaGi2g1v0434200.1
n.a. Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488; TrEMBL-Plants: tr|A0A1J7GVC4|A0A1J7GVC4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434200 LjG1.1_chr2 93074058 93080707 -
2 domain predictions
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LotjaGi2g1v0434200.2
n.a. Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488; TrEMBL-Plants: tr|A0A1J7GVC4|A0A1J7GVC4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434200 LjG1.1_chr2 93076024 93078403 -
2 domain predictions
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LotjaGi3g1v0226500.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT5G02230.3 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|I1J6W9|I1J6W9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0226500 LjG1.1_chr3 34992429 34996215 -
2 domain predictions
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LotjaGi3g1v0450700.1
n.a. Riboflavin kinase/fmn hydrolase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|K7M2J5|K7M2J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450700 LjG1.1_chr3 86422681 86427444 -
2 domain predictions
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LotjaGi3g1v0450700.2
n.a. Riboflavin kinase/fmn hydrolase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|K7M2J5|K7M2J5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0450700 LjG1.1_chr3 86422681 86427444 -
2 domain predictions
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LotjaGi4g1v0049600.1
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A151S8Q7|A0A151S8Q7_CAJCA Riboflavin kinase; Found in the gene: LotjaGi4g1v0049600 LjG1.1_chr4 6039120 6043988 -
2 domain predictions
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LotjaGi4g1v0301000.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT4G25840.1 glycerol-3-phosphatase 1; Swiss-Prot: sp|F4JTE7|GPP1_ARATH (DL)-glycerol-3-phosphatase 1; TrEMBL-Plants: tr|I3T577|I3T577_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0301000 LjG1.1_chr4 67527530 67533985 +
2 domain predictions
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LotjaGi4g1v0306300.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A151R7D6|A0A151R7D6_CAJCA Uncharacterized protein C24B11.05; Found in the gene: LotjaGi4g1v0306300 LjG1.1_chr4 68197559 68201881 +
2 domain predictions
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LotjaGi4g1v0306300.2
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A151R7D6|A0A151R7D6_CAJCA Uncharacterized protein C24B11.05; Found in the gene: LotjaGi4g1v0306300 LjG1.1_chr4 68198897 68201739 +
2 domain predictions
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LotjaGi4g1v0395900.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT4G39970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q680K2|GPPL1_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970; TrEMBL-Plants: tr|I1KSZ7|I1KSZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0395900 LjG1.1_chr4 77392792 77396407 +
2 domain predictions
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LotjaGi4g1v0425800.1
n.a. Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488; TrEMBL-Plants: tr|A0A1J7GVC4|A0A1J7GVC4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425800 LjG1.1_chr4 80065873 80068599 -
2 domain predictions
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LotjaGi5g1v0162300.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G33255.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q8RYE9|GPPL3_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255; TrEMBL-Plants: tr|A0A151T186|A0A151T186_CAJCA Putative uncharacterized hydrolase YOR131C family; Found in the gene: LotjaGi5g1v0162300 LjG1.1_chr5 41642816 41647066 +
2 domain predictions
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LotjaGi5g1v0236500.2
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT3G62040.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|I3SRG9|I3SRG9_MEDTR Haloacid dehalogenase-like hydrolase; Found in the gene: LotjaGi5g1v0236500 LjG1.1_chr5 54427913 54429447 -
2 domain predictions
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LotjaGi5g1v0314700.1
n.a. Haloacid dehalogenase-like hydrolase; TAIR: AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A0L9U119|A0A0L9U119_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0314700 LjG1.1_chr5 63289848 63292146 +
2 domain predictions
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LotjaGi6g1v0083600.1
n.a. Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT3G10970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254; TrEMBL-Plants: tr|I3SKS6|I3SKS6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0083600 LjG1.1_chr6 16379060 16385837 -
2 domain predictions
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