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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0306300 |
| Transcript ID | LotjaGi4g1v0306300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase; TAIR: AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05; TrEMBL-Plants: tr|A0A151R7D6|A0A151R7D6_CAJCA Uncharacterized protein C24B11.05; Found in the gene: LotjaGi4g1v0306300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68198897..68201739) extracted from Lotus japonicus Gifu genome v1.2.
CAGAAGCAACCTTTTATCTTAACAAACACACTTTTGCAACTTTACACCTCTTGATCCTCCATTCCGCCTGGTCTTTCTCT TGCTTCCTTCAATTCATCTACATTACTTTCATAGCATTTCTTCTTCATACTCTCTTCGCAAGCCATACGCATCATTGATT GTTTCCTTTCTGGTAATTAACTAATAGCTTCAGGTGTTCTTTCATCCAGTGCATTTTGTTTTTTCTGTCATTGTTCTGAA TCCTTCAGCTTTATATTTTCAATGAACCATGGCTTCATGATCATTGAAACACATCTGACATTAATATGTTGTAATGTTTT GCTTTGAAATTCTCAAAATTCACTAGCATGGAACAAATTTTGCAATCAAGTACCATAACATAGCTATGTTTTTCACAAAT GCACCCCCTTTTTTTTGCAAAAGCCCTGAAGTTCTAAAAATTGAGAATCAAAATGAATTCCCATATAAATTTTAGTAGGT TCAAGTTGTAATGAAACTTAGTGTAGGTTTGGATGAACTCAAAGCCGATCCACATTTAAGTCGATTAGGCAAAATCTTAC TTCTCTGTTTGGTATATGTAGGCGCAAACGAAGAACCAAACAGGCACTAAGTTTGTTCACTCTTCTTTGTCCAAGGTTCT CTTGTTGAAATGGAGTATGCTGACTGCTTCAAACAGCAGGCTAAGAGAACAAAATATGATTGCCTTCTTTTTGGTAAGTT TTGTAATCAGGACATTTTTCAAGTAACAAATTGAAAAAATTCATATTCGAGTATGTTATATAACCATTGAGATTGTTCTA CAGATTTAGATGATACTTTGTATCCCCTCAGTTCTGGTCTTGCAAAAGCATGTCACCAAAATATTAAAGGTAAGCAACTA TGTCATACTTGTGCCACAATATTCACAGTAATTAATGTCTTTTGTAATTGCTGCTTTTTTGGGTATTGACATGAGTGATA TCATTAATCTTAGATTACATGGTGGAGAAGCTTGGCATAGAACCAAAGAAAACTGATGAATTGACCAACCTCCTTTACAA TAACTATGGAACTACTATTGCTGGCCTAAGGGTCTGATTAATTACCTTGTATTCCTTATTATTTCTAGCTAAATATGGTT TAGATATTAAGTTCTGAAAATGCTGATAACTTTTGTAATTTGTTTTTCATTTTCTATTCAGGCAATTGGATATGACTTTG ACTATGATGAATATCACAGGTTCACTTTTTTATTTTTTTCCCCATCACATTCTTAATTATGTTTTTAATCATGTGCATGG TTTTAAATCAAGGTCCGCCATTGTGATTTCGGCCGTAATGTCAAGGTTTTGGAGGTTTCCGAAACCGCAATGCGACCGTG ATTACGGCCGGGAAAAACATTTGTTCACAATTTTTCGCAATACGAAGGACCGCAAGGAAACCTGAGTGTGACCGATACCG CGACCACAATTCAAAACCTTGCTCATGTGTTTATTCTGAAATGGTGATAATGATTTTTGAATTTCTGCTTGCAGTTTTAT TCATGGGAAATTACCTTATGAGAATTTGAAACCAGACCTGGTTCTGAGGAACTTGTTGCTAAGCCTCCCCTATAGGAAAC ATGTAAGTTGTTTATAACCAAAATGGGAATGCATTTCTTTATAAACATGTAAGAGTGGGTTTGTTTTCCAATTGAAAGCA CGCTCAACTGGCATATTCGACTCTGCAGTTTTTTCAACTGACCAAAGTTGTTGGATCGAGAAAAACCACATTCACATGCA GCTGTCCAATGGATAAACAAATACACTAAGTCTTACTTTTCATTTAATAAGTACCATTTTTGAAACTTCACCAATAGCTT ACTTCTCTTGTTTTCTGTCAATAGATCTTCACAAATGCAGACAAAGTCCATGCAATTAAGGTACTCTGCAGGCTTGGATT AGAAGATTGCTTCGAAGGAATCACATGCTTTGAGACCCTTAATCCAATTCACAAGAGCATTGCTCTGGATGATGAAGAGA ATAACATTGTGTTTGTTGGTTCAAATGGTGCAAGCTGCTCTAAAATCTTTGACATCATAGAGCACTTTGCTCAGCCTGAT CCTAGTGCAGACTTGCCAAACACACCAATTATATCCAAGCCTTCACAGAAAGCCATTGAATTGGCTCTCAAGATAGCCAA CCTTAACCCACACAGAACCGTAACAAAATCTCCCTTTGTGACTTCTATAGTCAAAATTTGTTACCTTCTCCAATATTTTT TTTCAATTTGCTTACATTTTTTATTTTGTTTCACTATTGTACTTTCAGTTGTTCTTTGAGGACAGTGTCCGCAACATTCA AGCTGGAAAGCGCACGGGTCTTCACACTGTGCTGGTAAGTGTGTGTTTGGATACTAGATCATGTGAATGGATTTTCATCT CAATTCATAAGAAGAATTTTGTCCAGTAGTTTCTGATTGTCACATTGTGCAGGTTGGTACATCCCAGAGAGTGAAAGGTG CAGATTATGCCTTGGAAAGCATTCACAACCTAAGTGAGGCACTGCCTGAACTATGGGAGGTTGGGATGAAATCAGAAGTT GCATGCCCTGAGAAGCCTGCTGTGGAGACAACAGTCACTGCTTGAGACCATGAAAGGAAGCACTTCTAATCACTGTAAAA TAGAATAAAAAGGATAAAGCCGACCTGGATTCCCCAACTCCTTCAGATGTAGTAACAATAATTGATGTTGATATTTTGTT CAGTTTATAAAAAACTCACTATGTAAAATAAATTGTCCTTTTCTGTCTTTCTTTACAAAGAATGCATATGATATGACTAG CTAGTTAATTAGAAACTAAAACAAGATCATGTATGAGAAGTGA
CDS sequence (LotjaGi4g1v0306300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTATGCTGACTGCTTCAAACAGCAGGCTAAGAGAACAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTT GTATCCCCTCAGTTCTGGTCTTGCAAAAGCATGTCACCAAAATATTAAAGATTACATGGTGGAGAAGCTTGGCATAGAAC CAAAGAAAACTGATGAATTGACCAACCTCCTTTACAATAACTATGGAACTACTATTGCTGGCCTAAGGGCAATTGGATAT GACTTTGACTATGATGAATATCACAGTTTTATTCATGGGAAATTACCTTATGAGAATTTGAAACCAGACCTGGTTCTGAG GAACTTGTTGCTAAGCCTCCCCTATAGGAAACATATCTTCACAAATGCAGACAAAGTCCATGCAATTAAGGTACTCTGCA GGCTTGGATTAGAAGATTGCTTCGAAGGAATCACATGCTTTGAGACCCTTAATCCAATTCACAAGAGCATTGCTCTGGAT GATGAAGAGAATAACATTGTGTTTGTTGGTTCAAATGGTGCAAGCTGCTCTAAAATCTTTGACATCATAGAGCACTTTGC TCAGCCTGATCCTAGTGCAGACTTGCCAAACACACCAATTATATCCAAGCCTTCACAGAAAGCCATTGAATTGGCTCTCA AGATAGCCAACCTTAACCCACACAGAACCTTGTTCTTTGAGGACAGTGTCCGCAACATTCAAGCTGGAAAGCGCACGGGT CTTCACACTGTGCTGGTTGGTACATCCCAGAGAGTGAAAGGTGCAGATTATGCCTTGGAAAGCATTCACAACCTAAGTGA GGCACTGCCTGAACTATGGGAGGTTGGGATGAAATCAGAAGTTGCATGCCCTGAGAAGCCTGCTGTGGAGACAACAGTCA CTGCTTGA
Protein sequence (LotjaGi4g1v0306300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYADCFKQQAKRTKYDCLLFDLDDTLYPLSSGLAKACHQNIKDYMVEKLGIEPKKTDELTNLLYNNYGTTIAGLRAIGY DFDYDEYHSFIHGKLPYENLKPDLVLRNLLLSLPYRKHIFTNADKVHAIKVLCRLGLEDCFEGITCFETLNPIHKSIALD DEENNIVFVGSNGASCSKIFDIIEHFAQPDPSADLPNTPIISKPSQKAIELALKIANLNPHRTLFFEDSVRNIQAGKRTG LHTVLVGTSQRVKGADYALESIHNLSEALPELWEVGMKSEVACPEKPAVETTVTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 295 | 295 | 1.4E-162 | – | |
| PANTHER | 1 | 295 | 295 | 1.4E-162 | – | |
| SFLD | 10 | 276 | 267 | 0.0 | – | |
| SFLD | 10 | 276 | 267 | 0.0 | ||
| SUPERFAMILY | 14 | 273 | 260 | 1.44E-28 | ||
| TIGRFAM | 17 | 246 | 230 | 1.5E-64 | ||
| TIGRFAM | 202 | 246 | 45 | 5.4E-10 | ||
| Pfam | 202 | 246 | 45 | 5.6E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0306300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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