Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0309000 |
| Transcript ID | LotjaGi4g1v0309000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PCI domain-containing protein 2; TAIR: AT2G19560.1 proteasome family protein; Swiss-Prot: sp|Q8GWE6|EER5_ARATH Enhanced ethylene response protein 5; TrEMBL-Plants: tr|A0A151R345|A0A151R345_CAJCA PCI domain-containing protein 2; Found in the gene: LotjaGi4g1v0309000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68474382..68479948) extracted from Lotus japonicus Gifu genome v1.2.
GCCTAACTAGCTATTGACAAGCCCAAATTCACCTCCGCTATGAGCACTTGCAATGGTGTTGTCGTTGCAGTGTAACCGTC GCGGTGGCAAGAGGAAGCAGCAATGGCGTACATGAACATGAGCATGGGTGAAGCCCATAGAAGAATCACCGACTACCTCA ACCGCTTCTCCGACGCCGTTTCATCTCAAGACGGAGCTTCCTTCAAGTCTCTCTTCGCTCTCTCTTCCAACTCCCCTTTT CTTCTCTCCCTCGCCGACGCCGTCGCGCTCTTCCACGACGCTAACAGGCTCATCAACCAGTCCGATAGCTACTCGCAATT CTCGGATATACTTCTTCCGCTTCTCCGATCTGTCCAGAACTATAAGCAGGGCGATTTCGTTGAAGCGTACCTCGCGTTTG AAAAAACTGCCAAGTATGTATGAATCACACTAAACCTGTTTTGATTGAAATTGAACTGAATTGAAGTTTTGGTGTGTTGA AATTGTGTGTGTTCAGTGCGTTTATACAGGAGTTTCGTAATTGGGAATCTGCTTGGGCTTTGGAAGCTTTGTATGTTATT GTTCATGATATTAGGGTTCTTGCGGAGAAGGTATGCAATGTTGAGGCTGAAATTTTGAATTATGAATTTTTTTAAATGGA GGTTTGGTTTGATTTTGTGTAATTTTTGTTTTTTGTTTTTGTTTTTAGGCTGATAAAGAATTGGCTTCCACTGGAAAATC CCCTGAGAAGTTGAAAGGAGCTGGCTCCTTCCTTATGAAAGTTTTCGGCGCGCTCGCGGTGTGTAAATATTTCTATCCAA CTCATTTAATTTGAAATCCAATTATGCTTGTCAAATTTAGCTTTGTATCCTTGTTCTGTTAATTTAGTTAGTGTTATCAA CCACACTATTAAAATTATAATGATTTGTGGACTACCACATAGTGCGATACCCGAAAAAAAAGAACATTTTGGAAACTCAT TTTTGGAATGTAATTCAGGCTAATTATTCGGATTGTATTACATTTTGGAAACTAATTTCCGGAATGTAATTTTTTAGGGT GTATGTTGGGTGTCACACTGTGCGGTATCCACGAATCATTTGTGCTATTAAAAACGTGCAATGGATAGTTTTGCTAGCTT TAATACTTTCGCTCCGGTTTTCGATCAATTTTTTTTTTCTTGTTGTAAAGCTAGATAACAATGCTGCTGCTAATTATATA TCCTTCCTTTTTCTTAGGTATCAAAATGAACTGTAACTTGTTCACTTTTGTTTTATGAGTTTCCTCTTGGAAATGTTACA CGTTTTCCTGAAAAATTAATAAGCTTGTGGCCGTGGGCTCCGAATACTCTTTCTTCCCCTCTGAATAAGACGAAGCAAGA GCGTCGTAGTGATTAAAACTCACTTGACATGCTAGAATTAACACTTAGCAGTGAAGGACCTACATAACTAACAATTACTG GTCTACGTGGCAAGGAGCTTGGTCCCTCTTATACAAGATCCCATGCTCAATAAAATAGGCGCTGGAAGAACTTTATCAGT TTATCCCCTTAAGTGTGTCCACCTTACCCCGCTCAAATTAGTTTTGGTTCAATGTGACTTCAGGAAATTGAGAACCTTTG ACCAAAAGTGGACCTAAATAAACAAAAGAATTTTTGTTATAAATTTCTCTATGTACAGTCTATAATTTCTCCATTTTGAA ACAAGTTTGTTCATGTAATGCATAAGGGAGTGAATTCTTCCGTGTCTAAATAATCTTCTACATACTTTAGGCGAGGGCGG AACTTTTAATCATACTAATCTTTTCTGAAAAATGTCTGCGCTCTGTTTTCTTTTTGTTCAAACTTAACTTCTTTGCTATA TTCAGTGGTTTTGCGGAATTTGTCTTCCAGAGCACTCTACTAAATATTTTATTGCTTGATTGTACTCCAGGGAAAAGGCT CCAAGCGTGTTGGAGCACTGTATGTAACTTGTCAGTTGTTCAAGATTTACTTCAAGGTATTTATTGTTCCTTTGGCTTCC TTATTGGTGATTCATGGACTCGTTTTATTATTTGATTTGTTATTGTGCAATGGTACTAGTATGAACTTGTAGCAATGGGA GTTAATCGAATATATGACATGTTCACTGGGGTCAGGGAAGGTTTGCTAGGCTAGAAATAACCTGACATTAGGATTGGAAT TTAGAGTTTGATTTTTATTTATGAATGTCTTGCAGCTCGGTACAGTTCACCTCTGCCGCAGTGTAATAAGAAGCATTGAA ACTGCACGCATATTTGATTTTGAGGAATTTCCAAAAAGAGACAAGGTTAAGTCTTGTATATGCTTGTAAATTTATACATG TATTTTGTAGATTATTTATCTTTATGATGTTTTTCAGGTCACTTACATGTACTATACTGGACGTCTCGAAGTTTTCAACG AAAATTTTCCTTCTGTAAGTGATATAATATTCTTTTAGAATAATTTATGATCTGCTTGTTCCAATTTATGAAATACCTTC TGTTATATATGCCAACTTTGTAATTTTTTGCAGTGTTACCTTCTGGTTTTTATATTCTTTGTAGTTGATGCTTCTTTTAA CGGAAATTGCACTCCTGTATGGTTGCAAGCTAACATCGATCAAAATATTGCTTTATCATTATCACCATCATCATTATGAT AAAGGGACTACCTCCGTTGCTCTCATTCCTAAAATGTCAATATAATTTATTAAAAAGAAAATTGAAAGAGAAGATACAAC ATTAAATGGTAACCAGATTATCACTATTTTTAAATTCTTAACTTCTTAGATAGTTGAAAATAACTTCTTAGATAATAAAA CAAAAGTATTCAAGTGCTAAACACTAGAACAAATATATTTTATTTGGAAAAAAAATAGGAGTGCTTGTTAATACAGTGAT TGTTGTTGTTATTATTATTAGGATTATCTCGTGTTTCTCTTCTCCAATTTTACCTGAATTATACTCATCCAATTGTGCAA CGGCAAAGAATGTTGAAACATACTTGTAGAATTTTGTCAAATCGTTTATTCAGCTTACATTTGTAATTTGACAGGCTGAT TATAAATTATCGTATGCCTTGAAGCATTGCAACCCACAGCGTGAAGCCAATATAAGGTTTGGTTCAGGTGTGCCAACTGT GTGCATTGCATATACATGAAGTGCGTTTGTTAATACTTAGTAGGTTGTATCTAAGCTCACAATCATGTATAGTAAATATG CATAGGTTTGTGAATGGGGTAAGGTGGGTAAGCCATAGCTTTAAAATGAGCTTCCTTAAGGAATTCTCTTAGAAATTGTT TATTAATTCGAACATGTATTTCATCAGTTAAAGAGGGGATATTTGAAAAATGAATCAGTTTCCAATTGCTCATCTCACTG TTAATGGACAGTGAAAAAAAGAAAGCCATGCACAACTATCCTTTGGTATAATTATAGTGATCTATAACTTGTTGTTTTGT TTGACGTAGGTTGATTCTGAAACATCTAATTCCAGTGAAGCTTTCAATTGGCATATTACCTAACCATAGGCTTTTGGAGA AGTACAGTCTACTTGAGGTATGTTTGGCATTTTAGGCATGATTTCCATGTTTATTCTCTATCTGTCCCCCCCCCCCTCTG GTTTAGTACTAGAAAGTATCTTTGTCTTCTGTTAATTGTAAACTTTTAGCGCTATCAGGTGCCAACTCCGTTGTTTCGTT TACTTAATAACGAGGCTGACTGGTGAGCTGGTTCAGACAAATCAGAATAAAATTAAGTATATAAATAAAAAAGGAACTAT TGTTCTTGAAGTGCCAGTTTCCAGGTCGTATTCTCATCACGTGCTTGACAGAACAACTCTCTTTTTTATAATCTTCAAAT GTGGTCATGATAACAGAATGATTTCTCTCCAAAATGTGGTCATCATGGTTCCAATGATGTTTATTTTTCCACCACCCAAA TGATATGACCACGAATATCATGACCCCTATTTTTAGCATGGTTATTTGCTACGATGTTTGGTTATTCAAAGAGGAAATGT GCAGTACCTTTCACATCAAGCACTGGGAAGGAATGTGCAGTACCTTTTTATACTGCAGAATAATTTTCCCAAGAATACTT GCATGTTGCATCTGGTAGTTGGCATTTACTGTTAAGAACTTTGTGTACCTTAGAAGTGCCTATGTAAATAATCTTTTTTT TTTTTAACTTTTGGACAGTACAGCAATATTGTACTAGCTCTCAGAAGGGGTGATCTTCGACTTCTTCGGTGTGCGCTTCA AGATTATGAGGACCGGTAGAATTGCCTGTCATTGTTTCATAAGGACCTGGTGTCCTAAAACTCCTTCTTGAGAGCATAAT GAAATTCGTATCTTTTACAGGTTCTTGAGATCAGGTGTATATCTTGTCCTGGAAAAGTTAGAACTTCAAGTATACCAGAG ATTAGTTAAGAAGATGTAAGTATCCAGTATCACCTTACCCTGTTCCATTCCAGCATGTATTAGGGTTGATTAACGACTTG GCTATTTATGCAAATCGCTGATTTCTTATTATTGCTTGATTGCAACATGGCAGTTACATTATTCAAAAGCAGAAGGACCC AAGCAAAGCCCACCAGGTGAAGTTGGAGGTTATTGTAAAAGCATTGAAATGGCTTGAAATTGACATGGACGTGGATGAGG TGATTTCTATAGTTTCCTCGTTCTTTCCTACTCTCAACTAGTTTATATCTTTCAAAAGCATGGAGGGAATTTCTGTTTTC GATGCATTTTTTTTAATTATATTTGATTTGATGCCTTCGCAGGTCGAGTGTATAATGGCCATATTGATATATAAGAATCT TATGAAAGGTTACTTTGCCCACAAAAGCAAAGTTGTTGTATTGAGCAAGACCGACCCTTTCCCTAAGCTAATTGGAAAAC CTGTCAATTCATAGAGACAATGTCATTCGTGGATCTGAAATTCAGAGGTGCAAGAGTGCATGGTTATGGCAGAGTAATTT TGCGAGAGGTTTTTCAACCTTAAGTTTAATGTTGAATGTTCGAGAATTCATGCAAATGTGTTCTACTGGTCAAAATATCA TAGTAGTTCTTCAGTTTTTAAGTAAGCTAATTTATATGCTAACTCTTGCATACTGGATTGTAGTTTAGATTCCGCTTCAA TGTTTTATGCTGCTGCATAAGTGCTACAAGTGGAAGCAAAAGATAACGATCTCGTTGCTATAACCTGTATTTTTAGCTTG AGTATCATCATCATCATCGTTGTTGTTATTTCAAGTATTCTTTCAAAAGCACATGTCAAGTCACTTCTATTCACTTTATT AGAGTTATATATAAAGATTTTAATTTTCATATATCCAATTAATGTGTGACTTGACAGTGTGGAAATCATAAACTTCATAT TCATAAGAATGCCCTTATCACAATCATACTCATAAGAATGCCTTATCACAATCATGCCCTGACGTTAAATTCAATGAAAA TTCAAACAAATATAAGTAGATTTTTTTTTTTTCACATTGTGATGAAAAACAATTTTAAAGGAAACTATTAATTATATGCT TTGAGCCATTTTTAATCCTCCAAGATTCACCTCTTTCTACAAAAGCT
CDS sequence (LotjaGi4g1v0309000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTACATGAACATGAGCATGGGTGAAGCCCATAGAAGAATCACCGACTACCTCAACCGCTTCTCCGACGCCGTTTC ATCTCAAGACGGAGCTTCCTTCAAGTCTCTCTTCGCTCTCTCTTCCAACTCCCCTTTTCTTCTCTCCCTCGCCGACGCCG TCGCGCTCTTCCACGACGCTAACAGGCTCATCAACCAGTCCGATAGCTACTCGCAATTCTCGGATATACTTCTTCCGCTT CTCCGATCTGTCCAGAACTATAAGCAGGGCGATTTCGTTGAAGCGTACCTCGCGTTTGAAAAAACTGCCAATGCGTTTAT ACAGGAGTTTCGTAATTGGGAATCTGCTTGGGCTTTGGAAGCTTTGTATGTTATTGTTCATGATATTAGGGTTCTTGCGG AGAAGGCTGATAAAGAATTGGCTTCCACTGGAAAATCCCCTGAGAAGTTGAAAGGAGCTGGCTCCTTCCTTATGAAAGTT TTCGGCGCGCTCGCGGGAAAAGGCTCCAAGCGTGTTGGAGCACTGTATGTAACTTGTCAGTTGTTCAAGATTTACTTCAA GCTCGGTACAGTTCACCTCTGCCGCAGTGTAATAAGAAGCATTGAAACTGCACGCATATTTGATTTTGAGGAATTTCCAA AAAGAGACAAGGTCACTTACATGTACTATACTGGACGTCTCGAAGTTTTCAACGAAAATTTTCCTTCTGCTGATTATAAA TTATCGTATGCCTTGAAGCATTGCAACCCACAGCGTGAAGCCAATATAAGGTTGATTCTGAAACATCTAATTCCAGTGAA GCTTTCAATTGGCATATTACCTAACCATAGGCTTTTGGAGAAGTACAGTCTACTTGAGTACAGCAATATTGTACTAGCTC TCAGAAGGGGTGATCTTCGACTTCTTCGGTGTGCGCTTCAAGATTATGAGGACCGGTTCTTGAGATCAGGTGTATATCTT GTCCTGGAAAAGTTAGAACTTCAAGTATACCAGAGATTAGTTAAGAAGATTTACATTATTCAAAAGCAGAAGGACCCAAG CAAAGCCCACCAGGTGAAGTTGGAGGTTATTGTAAAAGCATTGAAATGGCTTGAAATTGACATGGACGTGGATGAGGTCG AGTGTATAATGGCCATATTGATATATAAGAATCTTATGAAAGGTTACTTTGCCCACAAAAGCAAAGTTGTTGTATTGAGC AAGACCGACCCTTTCCCTAAGCTAATTGGAAAACCTGTCAATTCATAG
Protein sequence (LotjaGi4g1v0309000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAYMNMSMGEAHRRITDYLNRFSDAVSSQDGASFKSLFALSSNSPFLLSLADAVALFHDANRLINQSDSYSQFSDILLPL LRSVQNYKQGDFVEAYLAFEKTANAFIQEFRNWESAWALEALYVIVHDIRVLAEKADKELASTGKSPEKLKGAGSFLMKV FGALAGKGSKRVGALYVTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPSADYK LSYALKHCNPQREANIRLILKHLIPVKLSIGILPNHRLLEKYSLLEYSNIVLALRRGDLRLLRCALQDYEDRFLRSGVYL VLEKLELQVYQRLVKKIYIIQKQKDPSKAHQVKLEVIVKALKWLEIDMDVDEVECIMAILIYKNLMKGYFAHKSKVVVLS KTDPFPKLIGKPVNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 410 | 403 | 1.7E-168 | – | |
| PANTHER | 8 | 410 | 403 | 1.7E-168 | – | |
| Gene3D | 208 | 335 | 128 | 1.8E-35 | – | |
| ProSiteProfiles | 218 | 404 | 187 | 19.108 | ||
| Pfam | 286 | 401 | 116 | 6.7E-11 | ||
| Gene3D | 338 | 409 | 72 | 3.3E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0309000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…