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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0317700 |
| Transcript ID | LotjaGi4g1v0317700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT3G17630.1 cation/H+ exchanger 19; Swiss-Prot: sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19; TrEMBL-Plants: tr|A0A072UTN1|A0A072UTN1_MEDTR Cation/H+ exchanger 3; Found in the gene: LotjaGi4g1v0317700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:69538139..69544213) extracted from Lotus japonicus Gifu genome v1.2.
TGGAATGCGTAGATGCATAGAAGTGTTGAGACGGCAGGCGCAAAAATGGCAACTCAATCGGAGCAGTAAAAGCGGTCACT CCAAAGTCATCTTTGGTCAATTTTATTATAAATACACAACCACAAGAGAATAGAACAGAAAATCGTTATGCGAAAACTGA AAGCAATACACACACAGAGAGCGATCAGAGGCAAATCAGAGATCGAAATCGAAGTGTTCATTGCTTCTTCTCCTTCTTCT TCTTCCGGGGAATCAAAGCTTTGAATCAGGTAATTAAGCATTCACTTCGTCACCTTACAATTTCAATTTCATCGAGTTTT CAATTCATGCATTTAGATTTCACGATTTCTAAACCTGATCAGGTTCATCATCCACATAAATTAATACAACTATATATACA AGGTCAACTTTTCATCCAAAGTTGGATCCAATTCACGAGATACCAATTAAAATCACATTAGTTATAGACTTATAGCCATT AAATTCCCTACACCACCGGGTATCAATAATTTTTTCATATCACGTGAACCAACCATGTTTTCATACCTTTAATTCAATAT ACTACTAGACTATACTTATACTTTTAAGTAAAGTTTTCTTCACTAATATTTTTTTGACATTATTAATTTATTGAGAAAAA TCTTGCAACTCATTTTTTTTTATTAATTGATGTGATCTACATGAATTTTAACCCTTAGAAAAAAGAGATTGTCAAAGAGA GTAATGGCTGTAATGCATCTAAAATTTTAGGAGAACAGTAATTGATTTTTTCAAAATAATACTTTTGTGATAAGAATAAA TGAGTACTTTTTTTCTTAATATTTTTTGAAGTTAATAAATTTAATTGCATTCCATATTTCTTCCTTTCTTCTCCTGTGAC CAAATTTTTTTTTTCTTACTTTCTAGAATTATAACACATACATTTGACTTATTTTCGGAAGCAAAAAAAAATATTTGAAT TATTTGCTACACTTTTTTTTTGAACGAATTAATTGCTACATTAAGTAACAGTAAATTCGTTTTCCAGTTTCCCCTGAAAA AACGTTCAGAGAAGCTGTGAAAGTCAGAACTTTGTCTCCATTCAATTAATTCATCTACTTCTCGTAAAACGAGAATTCAA TGAAGAGATATTCTAGGATATCGAAATTGGAGTCGACCTTAATACGCGGTGTACTTGTGGGTATTTTTTGTTTTCTTATA TGGGTCAACTTAAATTATAATAAATGAAATTCTATAATTGTACATTGAGTAAATTTTAAATTAAATGAAATTCTTTAATT GCACAATGGGTCAAAGTAAGATGAGGATAGACTTAACTGACTTAACATTCCTGAGTTAGTAAAAGAGGCAATTTAATTAA TAAATATTTGAATGTTTTTGGTATAAATTTAATTATATATAAAATATGTTTTAGAGATAAATGATTTTTTAACTAATCAT TAAAAAGAATAAAATAAATCTAGATATTTTATGATAAAAAATCATAAGTAATTAATATTATCGTATTTATGTGAGTCAGA TAATTTAAACCGAACTAAAACTAATATCTCGTCATGTGATCTAGCTGATCCAGCTAGAAAAGATAAGAGTCATCGATTCT TTAATTTAGGTGATAAACTTTTTGTAATTTAGCAATTGATAAACAAAAGAAAAATTTAAAAAATATTGATAAAGTGATTT ACCAATTCTTTAAAAGTCTTTATCATGAAAATAAAATTTTAATTTATTTAAAAACAATATTTAAGTGATTTTATCATCAA AATTACAGTAAAAATATTCTTTTCAAACCAATTCCACCTACATCTTTTGAGAAATATATATGAAGAGAAGATAAAATATT TAGAGATAAGATAGATGATATAATTTGAAATTAATATCAAAAGTCTTAAAATTAATCTCTTTTTTTGAAAATCAACATCC TGGTTTCAGCTGGACTCAGGCTACCATATAGTTAAGTGGTTAATTAAATTCCTGTATATAGTAAAACGCAAACTCAAAAC TCATAACCTTTTATTCTGCACCACATAGCAATAGCAGTATATGCCTTAGTTTGCGTTTACATATTCCGCTTGAATCTTGT GTTGTGGTGTGACACCTGACAACAATTTGTTTTGCTTACCTGTACTCACCTATATAATATAAACTTTGTGATCCATTGAA AAGCAATTTTTTCATTCAATCATCTCAATTCAATTCATCACCTTCGTCCTTTGGCATTGCAGTGCCCTCACGTATATTGG GTGGTACGGTGTCTCTGGCGTCGCTCGCAATGGCGACGACCAACTTTTCCGCATGTCCGGCACCAATGAAGGCCGTGTCC AACGGGGCCTTCCAACATGAAAACCCCCTAGACTATGCGCTTCCTTTGTTGATCCTCCAGATATGCTTGGTGGTCACGTT CACCAGATGCATTGCATTCATTTGCAAACCCCTCAGGCAACCCAGAGTCATTGCAGAGATCATTGTAAGTTTGTTTTCTT CTCCTTCTTTGAAAATTTTATTTAAGCCCATGTTTGTCTATGCCATGCACCGGAAAATCACGGTGGACAGCAACAAAACC TAAATGAAATTGCTCCTATCTACGGTAATATTTTGACTTACCGTGATTTTTGAATGTTTTGCCCCATGCAAGCAATGATA TGTATGTACATCATATACTTTTGTATGATTTCATTTGTATGAATTGCATGTAAATTGAGAGAGGCAGGAAGATAAGAGAA GAGAGAAAAGTGAAATATGTCATAGATAATTTAATATGGCAGGAAGAGAAATAGAAAGAATAATCAGGCGAATTCACTAG AGGGTTTAAAATCGATATCATATATTAGGTGTTTGCATATTCATAGCATCCCTGGATCTTTTTTTTCCTCATAATCAATT ATCACCTTATAAAAGTTACTCACCAAGTTTTTTCTCAGAATTGATTTTGATTTTAGAATCAATTGTAGCACATAATAAAC CAAGATATCTTAGAACAAAAATGAAAATAACTGCCATGGACATGGTCCTGTATTTACTTTTGAATATTTAACTTTGGGGG TGAATTCATGTGTTTGATACTTTGATTCTTCTTCCATGATGATATTAAATTGAAATTGAATGCAGGGAGGAATACTACTG GGGCCATCTGCAATTGGACGAAGTGAGAAATTCTTGGACACAGTTTTCCCAAAGAAGAGCTTAACTGTCCTTGACACACT AGCCAACATTGGCCTCTTGTTCTTCTTGTTTCTGGTGGGTCTTGAGCTTGACATGCGTTCCATCAAGCGCACTGGTCGCA AGGCCTTGTGCATTGCCTTGTGTGGGATCTCTGTCCCTTTTGTTTTAGGCATAGGCACATCGGTTGTCCTCCGAAAAACC ATATGCAAAGGCGTTGAGCCTATCGCCTTCCTCGTCTTCATGGGAGTCGCGCTCTCCATCACTGCCTTCCCTGTCCTGGC TAGGATCCTAGCTGAGCTCAAACTCCTCACTACAGATGTCGGCCGCATGGCGATGTCAGCCGCTGCTGTCAACGATGTTG CCGCCTGGATCCTCCTTGCACTGGCAATAGCCCTGTCTGGCTCCAACTCATCACCTTTGGTTTCTCTCTGGGTGTTGCTA TCTGGTGCTGCTTTCATCGTTTTCGCGGTCTTCGTCATTAGACCTGTGCTTGGAGCTATGGCGCGGCGTTCCCCTGAGGG TGAACCGGTGAAGGAGCTCTACATTTGCATCACATTGACACTAGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAA TCCATGCCCTCTTTGGAGCTTTTGTGGTTGGTATAATCATGCCTAAAGATGGTCCCTTTGCTGGTGTGTTGATTGAGAAG ATTGAAGACTTGGTTTCTGGTCTCTTTTTGCCACTCTATTTTGCATCTAGTGGATTGAAGACCAATGTGGCCACCATCAG TGGAGGACTTTCCTGGGCACTACTAGCACTTGTTATCTTCAATGCTTGCTTTGGAAAGATCATTGGCACAGTTGTTGTTT CATTGTTATGCAAGGTTCCTGTTAGAGAATCCCTTGCACTTGGATTTCTCATGAACACCAAGGGGTTGGTTGAACTTATT GTTCTCAACATTGGAAAGGATCGCAAGGTACATATATCTTCTCTTGATAATAAAAACTTGTTTTCTTTTGCTCACATACA TATACAGTGTGATTTTTCTAGCTTTAGCAGAGAGGTGAAGGTTCGAGTCTTTGTGAATGCAGCTATTAAATATTTGTTAG GAAGAGTTTTGCTGATACTACTCAACTTGATGATACATGTGGTTTACACATATATGTCTATTAATAGAAGCAAGCATTTC TTATAAAAGTTTTCTCCATTCATTCTAACTGGTTATCAATCTTTGTTCTTGCAATGCAGGTACTGAATGACCAAGCATTT GCAATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATTGTGGTAGCTGTGTATAAACCTGCACGCAA AGGAGCACCTTACAAGCACAAGACAATTCAGCGCAAGGATCCTGAGTCCGAGCTCAGAGTGCTAGCATGCTTCCACAGCA CCCGCAACATCCCCACATTGATCAACCTCATCGAATCTTCCCGTGGAACCAGAAAGCGCGGTAGGCTCTGCATATATGCA ATGCACTTGATGGAACTCTCAGAGCGACCTTCAGCCATCACAATGGTTCACAAGGCGCGCAACAACGGCATGCCCTTCTG GAACAAGAAGCAGAATGATGAGGATCAAATGGTGATTGCTTTCCAGACTTATGGAAAATTGAGCAGTGTCAATGTTCGCC CCATGACAGCCATATCAGCTCTCAACACCATCCATGAGGATATCTGCACTAGCGCTCACCAGAAGCGCGCTGCTATGATT CTCCTCCCATTCCACAAGCACCAGCGTATGGATGGAACAATGGAGTCACTAGGACACTCATTCCATGTGATCAATGAGCT TGTCCTGAGCCACGCTCCTTGCTCGGTCGGAATTCTGGTTGATCGCGGTCTCGGAGGTACAAGCCAAGTCCAAGCTAGTG AACTTTCCTTGCAGGTTGTTGTGCCTTTCTTCGGAGGACGCGATGACAATGAAGCGCTTTCTTACGCGATGAGAATGGCT GAGCATCCTGGGATTATTCTCACTGTGGTGAAGTTTGTGGCTGTGCCTGGGAAGACATTGGCTTTTGGTGCTAAATTGGT TGGGGTAACATCAGACAAGAACCAAAAGGTAGCAATAGAGGAGCTTGATGGAAGTAGCCATGATGGTAATAAACAACAAC AGGATGAACAATTGTGGAATGAGTTGTTGAGTGCAAGCAGCAACAACAATGAGTCAATTAAGTATGAGGAGAGGCTTGTG GAAAGCAAAGGGGATATTGAGACAGCATTGAAGGAAATGAGCAGGAGCAATCTGATTGTTGTTGGTAGAATGCCACCAGT AGCACCTTTGACTAACAGAAGTGATTGTCCTGAGCTTGGACCTGTGGGAAGCTACATGGCTTCTTGTGATTTCTCCACTA CTGCTTCAGTTTTGGTTATTCAGCAGTATAACCCCACAACCGATATTCATCCACTGGTGATGGAGGAATCTGATATCCCA GAAGTGCCTGACACACCAAGGCATTATTAATGTGTGGATCAAATTCATTGAAATTAGACAAGGTCAAAACATTGAATTGA GTTGAAACAAACAGATGAAAGAAACATCAGTTTTATCCTATTTTATAGCATTGAAATTAGTTAGTGCATGATTGATTTTT GAGTTGATTGTTTAAATTAAGGTTTGGATATTTAAACTTATATGCATAAAAACTAGGATGAATAGAGTTTGATGCTATTT GAGGTTACATTCGCTATATGCATCTGTTACAGATCTGAAAGAGAGATGGTGATAAATGTAAGGTGAATCATGAACGTAAA GATAGTGTTAAAATAAATCAAGGTGAATGAGTCTTGTTTTCAAGGGAAAATTTACATAGGCATACTTGTGATATCAAATG GGAAATTCAAATTATTGATGCTATGTTCACGTCTCAACTGAGAATTTGCAGTTTTGTACTGAAAAATTGTCTGGA
CDS sequence (LotjaGi4g1v0317700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGACCAACTTTTCCGCATGTCCGGCACCAATGAAGGCCGTGTCCAACGGGGCCTTCCAACATGAAAACCCCCT AGACTATGCGCTTCCTTTGTTGATCCTCCAGATATGCTTGGTGGTCACGTTCACCAGATGCATTGCATTCATTTGCAAAC CCCTCAGGCAACCCAGAGTCATTGCAGAGATCATTGGAGGAATACTACTGGGGCCATCTGCAATTGGACGAAGTGAGAAA TTCTTGGACACAGTTTTCCCAAAGAAGAGCTTAACTGTCCTTGACACACTAGCCAACATTGGCCTCTTGTTCTTCTTGTT TCTGGTGGGTCTTGAGCTTGACATGCGTTCCATCAAGCGCACTGGTCGCAAGGCCTTGTGCATTGCCTTGTGTGGGATCT CTGTCCCTTTTGTTTTAGGCATAGGCACATCGGTTGTCCTCCGAAAAACCATATGCAAAGGCGTTGAGCCTATCGCCTTC CTCGTCTTCATGGGAGTCGCGCTCTCCATCACTGCCTTCCCTGTCCTGGCTAGGATCCTAGCTGAGCTCAAACTCCTCAC TACAGATGTCGGCCGCATGGCGATGTCAGCCGCTGCTGTCAACGATGTTGCCGCCTGGATCCTCCTTGCACTGGCAATAG CCCTGTCTGGCTCCAACTCATCACCTTTGGTTTCTCTCTGGGTGTTGCTATCTGGTGCTGCTTTCATCGTTTTCGCGGTC TTCGTCATTAGACCTGTGCTTGGAGCTATGGCGCGGCGTTCCCCTGAGGGTGAACCGGTGAAGGAGCTCTACATTTGCAT CACATTGACACTAGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATCCATGCCCTCTTTGGAGCTTTTGTGGTTG GTATAATCATGCCTAAAGATGGTCCCTTTGCTGGTGTGTTGATTGAGAAGATTGAAGACTTGGTTTCTGGTCTCTTTTTG CCACTCTATTTTGCATCTAGTGGATTGAAGACCAATGTGGCCACCATCAGTGGAGGACTTTCCTGGGCACTACTAGCACT TGTTATCTTCAATGCTTGCTTTGGAAAGATCATTGGCACAGTTGTTGTTTCATTGTTATGCAAGGTTCCTGTTAGAGAAT CCCTTGCACTTGGATTTCTCATGAACACCAAGGGGTTGGTTGAACTTATTGTTCTCAACATTGGAAAGGATCGCAAGGTA CTGAATGACCAAGCATTTGCAATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATTGTGGTAGCTGT GTATAAACCTGCACGCAAAGGAGCACCTTACAAGCACAAGACAATTCAGCGCAAGGATCCTGAGTCCGAGCTCAGAGTGC TAGCATGCTTCCACAGCACCCGCAACATCCCCACATTGATCAACCTCATCGAATCTTCCCGTGGAACCAGAAAGCGCGGT AGGCTCTGCATATATGCAATGCACTTGATGGAACTCTCAGAGCGACCTTCAGCCATCACAATGGTTCACAAGGCGCGCAA CAACGGCATGCCCTTCTGGAACAAGAAGCAGAATGATGAGGATCAAATGGTGATTGCTTTCCAGACTTATGGAAAATTGA GCAGTGTCAATGTTCGCCCCATGACAGCCATATCAGCTCTCAACACCATCCATGAGGATATCTGCACTAGCGCTCACCAG AAGCGCGCTGCTATGATTCTCCTCCCATTCCACAAGCACCAGCGTATGGATGGAACAATGGAGTCACTAGGACACTCATT CCATGTGATCAATGAGCTTGTCCTGAGCCACGCTCCTTGCTCGGTCGGAATTCTGGTTGATCGCGGTCTCGGAGGTACAA GCCAAGTCCAAGCTAGTGAACTTTCCTTGCAGGTTGTTGTGCCTTTCTTCGGAGGACGCGATGACAATGAAGCGCTTTCT TACGCGATGAGAATGGCTGAGCATCCTGGGATTATTCTCACTGTGGTGAAGTTTGTGGCTGTGCCTGGGAAGACATTGGC TTTTGGTGCTAAATTGGTTGGGGTAACATCAGACAAGAACCAAAAGGTAGCAATAGAGGAGCTTGATGGAAGTAGCCATG ATGGTAATAAACAACAACAGGATGAACAATTGTGGAATGAGTTGTTGAGTGCAAGCAGCAACAACAATGAGTCAATTAAG TATGAGGAGAGGCTTGTGGAAAGCAAAGGGGATATTGAGACAGCATTGAAGGAAATGAGCAGGAGCAATCTGATTGTTGT TGGTAGAATGCCACCAGTAGCACCTTTGACTAACAGAAGTGATTGTCCTGAGCTTGGACCTGTGGGAAGCTACATGGCTT CTTGTGATTTCTCCACTACTGCTTCAGTTTTGGTTATTCAGCAGTATAACCCCACAACCGATATTCATCCACTGGTGATG GAGGAATCTGATATCCCAGAAGTGCCTGACACACCAAGGCATTATTAA
Protein sequence (LotjaGi4g1v0317700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATTNFSACPAPMKAVSNGAFQHENPLDYALPLLILQICLVVTFTRCIAFICKPLRQPRVIAEIIGGILLGPSAIGRSEK FLDTVFPKKSLTVLDTLANIGLLFFLFLVGLELDMRSIKRTGRKALCIALCGISVPFVLGIGTSVVLRKTICKGVEPIAF LVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNSSPLVSLWVLLSGAAFIVFAV FVIRPVLGAMARRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGLFL PLYFASSGLKTNVATISGGLSWALLALVIFNACFGKIIGTVVVSLLCKVPVRESLALGFLMNTKGLVELIVLNIGKDRKV LNDQAFAICVLMALFTTFITTPIVVAVYKPARKGAPYKHKTIQRKDPESELRVLACFHSTRNIPTLINLIESSRGTRKRG RLCIYAMHLMELSERPSAITMVHKARNNGMPFWNKKQNDEDQMVIAFQTYGKLSSVNVRPMTAISALNTIHEDICTSAHQ KRAAMILLPFHKHQRMDGTMESLGHSFHVINELVLSHAPCSVGILVDRGLGGTSQVQASELSLQVVVPFFGGRDDNEALS YAMRMAEHPGIILTVVKFVAVPGKTLAFGAKLVGVTSDKNQKVAIEELDGSSHDGNKQQQDEQLWNELLSASSNNNESIK YEERLVESKGDIETALKEMSRSNLIVVGRMPPVAPLTNRSDCPELGPVGSYMASCDFSTTASVLVIQQYNPTTDIHPLVM EESDIPEVPDTPRHY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 4 | 805 | 802 | 0.0 | – | |
| PANTHER | 4 | 805 | 802 | 0.0 | – | |
| Phobius | 29 | 48 | 20 | - | – | |
| TMHMM | 30 | 52 | 23 | - | – | |
| Gene3D | 33 | 434 | 402 | 8.5E-103 | ||
| Pfam | 40 | 424 | 385 | 1.1E-64 | ||
| Phobius | 49 | 59 | 11 | - | – | |
| TMHMM | 59 | 76 | 18 | - | – | |
| Phobius | 60 | 76 | 17 | - | – | |
| Phobius | 77 | 95 | 19 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 96 | 113 | 18 | - | – | |
| Phobius | 114 | 124 | 11 | - | – | |
| Phobius | 125 | 146 | 22 | - | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 147 | 157 | 11 | - | – | |
| Phobius | 158 | 181 | 24 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 182 | 192 | 11 | - | – | |
| TMHMM | 193 | 215 | 23 | - | – | |
| Phobius | 193 | 217 | 25 | - | – | |
| Phobius | 218 | 222 | 5 | - | – | |
| Phobius | 223 | 243 | 21 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 244 | 263 | 20 | - | – | |
| TMHMM | 263 | 297 | 35 | - | – | |
| Phobius | 264 | 297 | 34 | - | – | |
| Phobius | 298 | 341 | 44 | - | – | |
| TMHMM | 333 | 355 | 23 | - | – | |
| Phobius | 342 | 367 | 26 | - | – | |
| Phobius | 368 | 373 | 6 | - | – | |
| Phobius | 374 | 393 | 20 | - | – | |
| Phobius | 394 | 404 | 11 | - | – | |
| Phobius | 405 | 428 | 24 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Phobius | 429 | 815 | 387 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0317700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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