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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0328400 |
| Transcript ID | LotjaGi4g1v0328400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G29810.1 MAP kinase kinase 2; Swiss-Prot: sp|Q9S7U9|M2K2_ARATH Mitogen-activated protein kinase kinase 2; TrEMBL-Plants: tr|H9D2I2|H9D2I2_LOTJA MAP kinase kinase 2; Found in the gene: LotjaGi4g1v0328400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:70708915..70711755) extracted from Lotus japonicus Gifu genome v1.2.
GCGCTAGCTAAATTCTGACTTGGTTATATGTGGGCTTAATGTTTGTTTTATGTTTTCAGCCACCCCCAATCAAGGCAGTG GACAACCAGTTAAGTTTGGCAGACATAGACGTAATCAAAGTTGTTGGAAAGGGAAGTGGAGGGGTAGTGCAATTGGTGCA ACACAAATGGACTAGTCAGTTTTTTGCATTAAAGGTATACCTGCTGTATATCTCATCCCTTTCTTTGAGTTTATATCTCT GTTCTCTCGTTCCTAGTTAGTTCACCTTTATTGGCATTCTCTACCCACATTGCATACTTGTAGACATGATGCCATTCCAC TCTCCATTACATCAACGAGGAGTGCTTGCAACACTCACTCTAACACTATTTTCATCACTCTCCCTTCTATTGGTTAAAAT TCATGTAGGTCCTACTAAATTGGAAGTGAGACCCACATTTTAGTGGATCCCTCATGAATTTCAACCGATGAAAGAGAGGG TGTTGAAAAGAGTGTTAGAGTGAGTGTTGCTTGCATTTCTCTACATCAATTTCATTCAATTCATTGAGCAAGGTAATTTG AAACTTATTATCTACATCAAGTGTTAGAGTGAGTGTTGCTTGCATTTCTCTACATCAATTTCATTCAATTCATTGAGCAA GGGAATTTGAAACTTATTTTCTCCATGCCATTTCTGGGTCACTTGAGCGCATATTATATACTATAAGTTTCAGAAAGCAA TTTTTTTCCATTTGCGTTTCATGATTTAGTTTCAGTAGGAGTAACTCAATTTCATTGAAGTAGTCAGTGAGGTAATTTTT ATTTTGTTGCTGATGATTCCTTGTCGATTATGTCAGATGTCCGAACATATCCTTTTGTTCCCCCTGCTTTTGACTTTAGA ATTGTGTTTAATTAACATAACGATTGAGATGTTGGTCTCTTCTCATAGGAACTTGTATATTTTAATCAATTGCTGGACAA GACAAATTTAAGTTATGATTTGAACTCTGATTACATCTGGACTTAAGATCATCAATGCCCCTGCCCGCCCTTCGTTGTTG ACCATTCCCTTTCTTTACTTAATTTTTGGAAGGAGCGCAATGATTTATTAATGTGTCCCATATTGGTTTCGTGCCCTGCT TTTGGAAATTTTAAATTTCATTTGTTTCTCTGTCTGGCTGCTAATTGAACAACTTAGTATTCTAGTTTTTTAGCTTGGAA GGCTACTACTTCTATATCATGATTTTCTTATCACTAGGTACTTGAAGTTATGACTTATGAGCTAATTACTTTACTTTTTT ATCTGATATTTTTACAAGGTTAATGCTATTATGTATATCCGTTCAACCTTGTTCTTAAGTCACTTTGTATGAATTCTTCA CAATTCAGATAATTCAAATGAACATTGAGGAGTCTATTCGCAAGCAGATAGCACAAGAACTGAAAATTAATCAATCAGCA CAATGTCCTTATCTTGTTGTCTGCTACCAGTCATTTTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGG AGGCTCCTTGGCTGATCTTCTGAAGAAAGTTAAAACAATTCCAGAGCCTTATCTAGCTGCCATCTGTAAGCAGGTAAGGA GCAAGACTATGTATTTCAGTCTCAAACCCATAATTCTTTTCACTGAATCCCGAACAATAGCTTAGCTGACCCCTTCGTTT ATTCTTCTTTTTTTACGATGTAGGTGCTGAAGGGTTTAATGTATCTTCACCATGAAAGACATATCATCCACAGAGACTTA AAACCTTCTAATTTGTTGATTAATCATATAGGCGAAGTAAAGATTACCGACTTTGGTGTGAGTACAATTATGGAAAGTAC ATCTGGTCAAGCAAATACTTTCATTGGCACATACAACTATATGTCTGTAAGTAAAATATGCAAGCATATATATCATTCTA CTACCAAAATCCATCACTGTTGTGCAGAATGTAAAATCCACTCTTGCCAATTTTACAGCCAGAGAGAATCAATGGAAGCC ATGAGCATGGCTACAACTACAAGAGTGATATATGGAGTTTGGGACTAATATTGCTCGAGTGTGCTATGGGGCGGTTTCCA TACGCACCACCAGATCAAAGTGAAACCTGGGAAAGTATTTTTGAACTTATTGAAACTGTCGTCGACAAACCTCCTCCTAG TGCTCCATCCGAACAGTTTTCTACAGAATTTTGCTCATTTATCTCTGCATGGTAATTGCTAAGTTTTCTGACTAGTTGTG TTCTATCAAGAAATTTAAACCTCCAAAAGTAAATGAAAACACCACACACTCGCAGAGTAAACTTTTAATTAGCGCTGGTA GTTTAAGGTTATCCTGAAATAGTTTGGATGCTTGGGGAGCCATCATTTTGAAGAATGCTGATTTAGGCAACATTAGTCAA AATGTAAAGCCCTACCTACCTATAATAACCTTTATTTTCCTATGTAATTTTAATTTTTATGTTGTCTTTCTTAATTGCTT TGAACAACCCTCCATGTGTTTAAAACAAACATAAAAAGCTGGTACCTTAAATCACTATTCAGTTGGCTATTTTGCTGTGA ATTCTACATCACAATGTGATTTTTATGAGTATTCTGATCCCCCTTTTCAATGTGCTCTTTGTTTAGTCTACAGAAAGACC CAAAGGATAGATTGTCGGCTCAGGAACTTATGGTATGTATAATCTCACGCATATGTACATATACCATACACAACAGTATT TCTTATGCTTTATATCTAATTGAACTTCCAGAGACTTCCTTTCACCAGCATGTATGATGACTTGGATGTGGATCTTTCAG CTTACTTCTCCAATGCAGGATCTCCACTTGCAACCTTATAA
CDS sequence (LotjaGi4g1v0328400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTTTTATGTTTTCAGCCACCCCCAATCAAGGCAGTGGACAACCAGTTAAGTTTGGCAGACATAGACGTAATCAA AGTTGTTGGAAAGGGAAGTGGAGGGGTAGTGCAATTGGTGCAACACAAATGGACTAGTCAGTTTTTTGCATTAAAGATAA TTCAAATGAACATTGAGGAGTCTATTCGCAAGCAGATAGCACAAGAACTGAAAATTAATCAATCAGCACAATGTCCTTAT CTTGTTGTCTGCTACCAGTCATTTTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGCTCCTTGGC TGATCTTCTGAAGAAAGTTAAAACAATTCCAGAGCCTTATCTAGCTGCCATCTGTAAGCAGGTGCTGAAGGGTTTAATGT ATCTTCACCATGAAAGACATATCATCCACAGAGACTTAAAACCTTCTAATTTGTTGATTAATCATATAGGCGAAGTAAAG ATTACCGACTTTGGTGTGAGTACAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACATACAACTATAT GTCTCCAGAGAGAATCAATGGAAGCCATGAGCATGGCTACAACTACAAGAGTGATATATGGAGTTTGGGACTAATATTGC TCGAGTGTGCTATGGGGCGGTTTCCATACGCACCACCAGATCAAAGTGAAACCTGGGAAAGTATTTTTGAACTTATTGAA ACTGTCGTCGACAAACCTCCTCCTAGTGCTCCATCCGAACAGTTTTCTACAGAATTTTGCTCATTTATCTCTGCATGTCT ACAGAAAGACCCAAAGGATAGATTGTCGGCTCAGGAACTTATGAGACTTCCTTTCACCAGCATGTATGATGACTTGGATG TGGATCTTTCAGCTTACTTCTCCAATGCAGGATCTCCACTTGCAACCTTATAA
Protein sequence (LotjaGi4g1v0328400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVLCFQPPPIKAVDNQLSLADIDVIKVVGKGSGGVVQLVQHKWTSQFFALKIIQMNIEESIRKQIAQELKINQSAQCPY LVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPYLAAICKQVLKGLMYLHHERHIIHRDLKPSNLLINHIGEVK ITDFGVSTIMESTSGQANTFIGTYNYMSPERINGSHEHGYNYKSDIWSLGLILLECAMGRFPYAPPDQSETWESIFELIE TVVDKPPPSAPSEQFSTEFCSFISACLQKDPKDRLSAQELMRLPFTSMYDDLDVDLSAYFSNAGSPLATL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 7 | 284 | 278 | 1.0E-26 | – | |
| Gene3D | 10 | 102 | 93 | 5.6E-27 | – | |
| PANTHER | 19 | 310 | 292 | 8.1E-121 | – | |
| PANTHER | 19 | 310 | 292 | 8.1E-121 | – | |
| SUPERFAMILY | 20 | 293 | 274 | 3.64E-81 | ||
| ProSiteProfiles | 23 | 286 | 264 | 46.93 | ||
| SMART | 23 | 286 | 264 | 9.7E-88 | ||
| Pfam | 25 | 285 | 261 | 4.8E-68 | ||
| ProSitePatterns | 29 | 52 | 24 | - | ||
| CDD | 38 | 290 | 253 | 9.95073E-144 | – | |
| Gene3D | 103 | 306 | 204 | 3.9E-63 | – | |
| ProSitePatterns | 141 | 153 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0328400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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