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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0334100 |
| Transcript ID | LotjaGi4g1v0334100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT3G06510.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q8L6H7|SFR2_ORYSJ Beta-glucosidase-like SFR2, chloroplastic; TrEMBL-Plants: tr|A0A072UTJ9|A0A072UTJ9_MEDTR Beta-glucosidase; Found in the gene: LotjaGi4g1v0334100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71302142..71307472) extracted from Lotus japonicus Gifu genome v1.2.
GGTAAATGAAGTCAAATATGGAAAAGTCGAGGTAAGATAAAGTGGGGAGCAATTTTACAGGTGAGGCTGAGAGTAAAGCA TGCTTTCATTTCATTTTCATGTCCCAGATATTATGTGATAAGAGATCAGATAACGCCAATAGAACTGAGGAAGCATTAGC ATGGAAAGTTAGTTGGAGATTACGTGCACAGCAACAACTCCTCTTAGTGAGTGAGTGACTGAGTGAGACGGCGATGACGC CGGTGTCACTCTTCCTCGTCGCCACCAAGCTCGCCGGAGCTCTCGCCACTCTCTCCGTCGCCGCCAATGCCTTCTCTTAC TCTCGTTTCCGCAACAAGAATCTCCGCCCATTCCGCTCCCCTATCGATGAATCCTCCGACCCTCTCGCACTCTTCGACAT TTCAGGTCCCTAACTACTATCAAACCATGCAAAATCCATCATTGTTGCTATTTCAATCTGCTATCTAGTTTTGCTATTTG TGTGGAACCAAAGCATGCTATAGAGGATGAGCTAAACTTGTTTGGTTAATTTTTTTTGAAGAGGGAGAATCAGAAAATGG GTTTTTCTTTGGTTTGGCTACGGCACCGGCACATGTTGAGGACAAGCTTGATGATGCTTGGATACAGTTTGCTGAACAAA CGAGTGTTGTTGAGCCCAAGCAGGAAGTGGATGCCTTGATGGGCTCTGCTGCTGGTGATGGTGGCGTTCAAGGAGCTGCA TCGTCTCCAAGGCAAGCTCATGACAAGGCCAAGAAGCCTCTTAAGGTTGCCATGGAGGCCATGATTAGAGGATTTCAGAA GTACATGGAAATGGAAGTAGAGGGTCATGAAGAACAAGAAAAAGAACAGCCTAATGTAACTTCTTGGCATAATGTTCCAC ACCCGTAAGATTTCATATTTTTATTTGAATGTTAATGGGGATTGAGGGAATGATATAGACAGTGCCCTGATATAGCTTCT ATTAGAAAAGGTTATTAATTCATTGCATGTTTTATTTTCGATAATAAATTTATATTTTTAAACTGCGGCGCTCCTGCACT GCTTAGCGGACAAGGATACTTTCATGTAACATGATGGTCTTGTTAGAGAGAGGAAGGTATATTTTAAAACTGATATAAGT GTATCCACAGTGAGACATGGTGAGTTGAAACATAAGTCTATGCACCATCCTATCTCTCACAAATAGGAGAGAATTCCAAT CCTTTGTTAGCTGGGCAATATGTAAATTTCAGTAAAATATGGAAGGGAAATTGAAGGGAGAATTATTTCAGGTGAATATT ATCTAATTTAAGAAATTTTCATAATGAAAGGAATAAAAGATAGGTTGTTGTGTAAACTTCTGATCATTGCTTATATATGT TCATAAAAATTATATTAGTTTCTTAATTCAAAAATGGGAGTTTACCCTCCATCGAATGCTACACCCTCCTTCTATATGGA AAAAAGAAAAACACTTCGATTTTGTAGCTGCATAGAAATTAAAATAATGCCTGATTTCCAGGGAGGAGAGGTTAAGGTTT TGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGCCTGGGAATAGATTGGTCAAG AATCATGCCAGAGGAGCCAATAAACAGTCTTAAAGAATCTGTAAGCTGGATTCTGACCTTTCATAATGATGATGAGTTAT TGTGACATTTATGATTAAGCTTATGTTAGTCAATATCTTCTGTAGTGGATCTTATGAATATGATTTTCAATTTTCAAACT TTTATCTTGAATCCTTATCAACCGGCAGAGATTTTACTTCTATGAATAACTCACCTGCTGTTCTTAGGTTAACTATGCTG CATTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGCTCATATGGGATGAAGGTGATGCTCACTCTTTTTCATCACTCA CTTCCACCTTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTACTTCATGGACTTTACCAGGTTAGG TTTACCTTCAGGGACTGTTGGCTGTACGCCATTAAATTATTCCTGCTGAGGTTTTCTCTCAAAAATTCAACAGAGGTTAA CTGTTACCTTGTGCCAGCCTATCTTTGGTTGTAACTTGTAAATGAACAATGAAGTGTATAGACTAAATCTGACGATTATT TATTTCTTGACTGATTGATCTCTGATAGTGTAAGTGTCTATTAGTAAGCAAGTTAGTTAGGTAGGTTAGTTAGGTTGGGA TAGTTTAAAGGAATAAGGCATGTTGCCTGTAAATAAGATCAAGATGAGAGGTTGTGAGGGAGATCTAGCTAGTCATTTGA GTGAAAATTCGGGCCTTTAGGCAGGGGGATTTCCAGTCCTTCAAAGTACTGCAGTGTTCCACTGTGTAATTAGGGTTTGT CCCTGTTTCTTTCTCTTAAGACACCAAGTTGCGATTATTTTCTATGTTGGATGTGTGCTGTTTACTTGAGGACATTACAG TAGAATTATAAAAAAAAATTGAATTTATATGGAACAGTTACTGCATAATTACTTCCATCTGTGATTAATCCATCTTGAAC CCATTATGATATTATGGTTTCTGAGAATTTATGTCACATTTAACTATCCTTTTGTCTCTTTGCTTTTGACTACTAATTCC ATGTTGGACTATTTTTTAGAAGTATGTTGGGTAAATTTTAGAGATTAAATTCTTCTTTCCGCATATTATTAGGTTCCTTT TCGTGTATATTATTTTCCCTGATGTTTAGCTGAAATTGTTATATAATTTTGTTGAGTTACTAGTCTACGAGCTTCGCCAG TATATTCACATATTCTTTCTCATATCCTCCCATTCAATGCAGGCTTGTTGTAAACAGTGTATCAGATTTAGTAGACTATT GGGTAACATTTAATGAGCCTCATATCTTCTGTATGCTTACGTATTCTGCCGGAGCTTGGCCTGGTGGTCATCCTGATATG CTGGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGC ATATGATTACATCCATGAACAAAGGTGAATGTCTTTAAAAGATAGAATTTGTTGCAAGTTTTTATTGAGTATATGTCATG GATTCACCAATGAAGGTTAAACTCTGTTTCCCACACAATGTTTTTATGATATTTATGCTCTTTCTGGGTTATGTACATAA GTTTTTGGTAAATAGCTTCAATCTATGCCTATCTGTTCGATTTCTTAGCTGTCAGATTTTTCTAGTCTAGCTAATTTCTT TTTCCTTCTCACCGCTCACCGCTTCTCATTTAACAGGCTAAACATTTGAAGTTGATTACTTTACTTGGTTGCTTTTCTAA TTTTGTGATTGTAGTTGTCTGAACTATAGTAACTTTTTGGCAGTAACTCATCAAATCCGAGAGTCGGCGTAGCACATCAT GTGTCATTTATGCGACCGTATGGGCTGTTTGATGTTGCTGCTGTTATATTGGCTAATTCATTGACTATCTTCCCATACAT TGATGAAATATCTGAAAAGCTGGACTTTATAGGCATAAACTACTATGGGCAGGTTTGGTTATTAGCCTTGGTAGTGCCCT GTGTATGATATCTGCATATACTCACATGGTGATTACTACATTTATTTCAGGAGGTGGTCTGTGGTTCTGGCCTGAAGCTG GGGGAAAATGATGAGTATAGTGAATCTGGTCGAGGGGTATATCCTGATGGCTTATATCGGATGTTGCTTCAGTTTCATGA AAGATACAAACATTTAAATGTCCCCTTCATCGTTACTGAAAATGGGGTTTCGGATGAGACAGATTTGATCCGCCGGCCAT ATCTCCTGGAGCATTTGCTTGCTATTTATGCAGCCATGACCATGGTTTTGACTCTGAAGTTTTTATTTGCTTATGGTTTT AAGTTATTCTTTTATAAACAATGATTATGTTTTTTACCTTCTCATAATTGTTTGACAGGGCGTGCCTGTGCTTGGTTATC TGTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTTGCAGTTGACCGGGCC AATAATCTTGCACGGATTCCCCGTCCTTCGTACCGCCTATTTTCTAAAGTTCGAACTTTTTCTGGCTGCATTTCTTTCTC CAGGATATTTGCTTTGTCTAATTTTGGGTGACACTTTTGATGGGCTCTTGATTGCAGATTGTGAATACTGGTAAAATTAC TCGTGAAGATCGTGAAGCAGCATGGTATGAACTCCAACGAGCTGCTAAAGAGAAGAAAACAAGGCCATTTTATCGGTCTG TGGACAAACATGGTCTAATGTATGCAGGTAATTATTTACTCTTAATTTAGACTAACAATCTTTGTCTCTGTTGATTTTGG GCCTGTATAATTGATTTTACTTGATCTCCCCCCTCCCTTATTTTAGCATTTTGTTCATTCAATACACACATTGTTTTTAG TTATTTACTGTGGAGCTTTTATGCCAATAATTTAGTCACTTAAATTTTTGGTAGTTATATCAGCACCATGCAAAACTTGA GAAGAATATCCTGTTCCTACTGTGACTACTTGATTTATCATAATGCAAATTTACATTTAAATCACAACTATTGGTTTATA CAGGTGGCCTTGATGAGCCTATACAGCGACCTTATATTGAACGAGATTGGCGGTTTGGGCATTATCAGATGGATGGTCTC CAAGATCCCTTGAGCCGTTTCTTAAGATTCACTATTCGATCACTCTCTCTTAAATGGAAAAAGGAACCTCAAAAGAAGAA TGTCAAATTAGTTCTCGAGCCTCTTGAACTTAGCAGTTGACAACTTACCTATTTCTCTTGTCGCAGATTCCATTGTTTTG AGTGATGAACACTTTCAATTTCAATATTACACACAAGATACATACGTATAAGTTTCACGATGTCTGTAATATTGCACAAG TAGCTGTTTTGATGCCTTCTTCTTGTAAGCTTATGTGTCACATATTTAGGAAGAAGTCAAAATTATTATTCAAAGTGGAG GGTAATATATGGGCAGTGGGCTGCCTATCCCTTTAATTGGAATTTCATGTATGACAATTGACAATGCTCAAAGAGTGTAG GAAGAAGTCAAAATTAATATTCAAAGTGGAGGGTAATATATGGGCTGCCTGTCCCTTTAATTGGAATTTCATGTATGGCA ATGCTCAAAGAGTGTATGTCCAGGACTGCTTCATATAATTAATAGTCCTTTTATTTTTTTGTTTTTGTTTTGAGAAACTA TGATTTTCTCTTTGCAATGAAGCAAAATATGATATAGAATCTCATTTCTTT
CDS sequence (LotjaGi4g1v0334100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGCCGGTGTCACTCTTCCTCGTCGCCACCAAGCTCGCCGGAGCTCTCGCCACTCTCTCCGTCGCCGCCAATGCCTT CTCTTACTCTCGTTTCCGCAACAAGAATCTCCGCCCATTCCGCTCCCCTATCGATGAATCCTCCGACCCTCTCGCACTCT TCGACATTTCAGAGGGAGAATCAGAAAATGGGTTTTTCTTTGGTTTGGCTACGGCACCGGCACATGTTGAGGACAAGCTT GATGATGCTTGGATACAGTTTGCTGAACAAACGAGTGTTGTTGAGCCCAAGCAGGAAGTGGATGCCTTGATGGGCTCTGC TGCTGGTGATGGTGGCGTTCAAGGAGCTGCATCGTCTCCAAGGCAAGCTCATGACAAGGCCAAGAAGCCTCTTAAGGTTG CCATGGAGGCCATGATTAGAGGATTTCAGAAGTACATGGAAATGGAAGTAGAGGGTCATGAAGAACAAGAAAAAGAACAG CCTAATGTAACTTCTTGGCATAATGTTCCACACCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGATACAGAACTAAA ATTGGCCAAGGATACTGGTGTTACTGTTTTTCGCCTGGGAATAGATTGGTCAAGAATCATGCCAGAGGAGCCAATAAACA GTCTTAAAGAATCTGTTAACTATGCTGCATTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGCTCATATGGGATGAAG GTGATGCTCACTCTTTTTCATCACTCACTTCCACCTTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGA TTACTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCAGATTTAGTAGACTATTGGGTAACATTTAATGAGCCTC ATATCTTCTGTATGCTTACGTATTCTGCCGGAGCTTGGCCTGGTGGTCATCCTGATATGCTGGAGGCTGCTACTTCTGCA CTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGCATATGATTACATCCATGAACA AAGTAACTCATCAAATCCGAGAGTCGGCGTAGCACATCATGTGTCATTTATGCGACCGTATGGGCTGTTTGATGTTGCTG CTGTTATATTGGCTAATTCATTGACTATCTTCCCATACATTGATGAAATATCTGAAAAGCTGGACTTTATAGGCATAAAC TACTATGGGCAGGAGGTGGTCTGTGGTTCTGGCCTGAAGCTGGGGGAAAATGATGAGTATAGTGAATCTGGTCGAGGGGT ATATCCTGATGGCTTATATCGGATGTTGCTTCAGTTTCATGAAAGATACAAACATTTAAATGTCCCCTTCATCGTTACTG AAAATGGGGTTTCGGATGAGACAGATTTGATCCGCCGGCCATATCTCCTGGAGCATTTGCTTGCTATTTATGCAGCCATG ACCATGGGCGTGCCTGTGCTTGGTTATCTGTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAA GTTTGGACTTGTTGCAGTTGACCGGGCCAATAATCTTGCACGGATTCCCCGTCCTTCGTACCGCCTATTTTCTAAAATTG TGAATACTGGTAAAATTACTCGTGAAGATCGTGAAGCAGCATGGTATGAACTCCAACGAGCTGCTAAAGAGAAGAAAACA AGGCCATTTTATCGGTCTGTGGACAAACATGGTCTAATGTATGCAGGTGGCCTTGATGAGCCTATACAGCGACCTTATAT TGAACGAGATTGGCGGTTTGGGCATTATCAGATGGATGGTCTCCAAGATCCCTTGAGCCGTTTCTTAAGATTCACTATTC GATCACTCTCTCTTAAATGGAAAAAGGAACCTCAAAAGAAGAATGTCAAATTAGTTCTCGAGCCTCTTGAACTTAGCAGT TGA
Protein sequence (LotjaGi4g1v0334100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTPVSLFLVATKLAGALATLSVAANAFSYSRFRNKNLRPFRSPIDESSDPLALFDISEGESENGFFFGLATAPAHVEDKL DDAWIQFAEQTSVVEPKQEVDALMGSAAGDGGVQGAASSPRQAHDKAKKPLKVAMEAMIRGFQKYMEMEVEGHEEQEKEQ PNVTSWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRLGIDWSRIMPEEPINSLKESVNYAALERYKWIINRVRSYGMK VMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVSDLVDYWVTFNEPHIFCMLTYSAGAWPGGHPDMLEAATSA LPTGVFQQAMHWMSIAHSKAYDYIHEQSNSSNPRVGVAHHVSFMRPYGLFDVAAVILANSLTIFPYIDEISEKLDFIGIN YYGQEVVCGSGLKLGENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIVTENGVSDETDLIRRPYLLEHLLAIYAAM TMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYRLFSKIVNTGKITREDREAAWYELQRAAKEKKT RPFYRSVDKHGLMYAGGLDEPIQRPYIERDWRFGHYQMDGLQDPLSRFLRFTIRSLSLKWKKEPQKKNVKLVLEPLELSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 614 | 614 | 0.0 | – | |
| PANTHER | 1 | 614 | 614 | 0.0 | ||
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 366 | 343 | - | – | |
| MobiDBLite | 105 | 129 | 25 | - | – | |
| SUPERFAMILY | 151 | 542 | 392 | 5.22E-97 | ||
| Pfam | 183 | 367 | 185 | 4.2E-33 | ||
| Phobius | 367 | 387 | 21 | - | – | |
| Phobius | 388 | 472 | 85 | - | – | |
| Pfam | 388 | 536 | 149 | 9.8E-23 | ||
| PRINTS | 393 | 407 | 15 | 1.6E-14 | ||
| PRINTS | 450 | 458 | 9 | 1.6E-14 | ||
| ProSitePatterns | 450 | 458 | 9 | - | ||
| PRINTS | 462 | 473 | 12 | 1.6E-14 | ||
| Phobius | 473 | 492 | 20 | - | – | |
| TMHMM | 473 | 495 | 23 | - | – | |
| PRINTS | 483 | 500 | 18 | 1.6E-14 | ||
| Phobius | 493 | 640 | 148 | - | – | |
| PRINTS | 507 | 519 | 13 | 1.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0334100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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