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LotjaGi4g1v0334700.3

Overview

Field Value
Gene ID LotjaGi4g1v0334700
Transcript ID LotjaGi4g1v0334700.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C-like protein; TAIR: AT3G62260.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q3EAF9|P2C49_ARATH Probable protein phosphatase 2C 49; TrEMBL-Plants: tr|I1MRV7|I1MRV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0334700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:71405499..71407157) extracted from Lotus japonicus Gifu genome v1.2.

TTTGTTCTCGTTTTGAAGATGATGGCGGAAGCGGAAATTATCTGTCAACAGAGCATTCCCATGTTGGAGGTCAAGTATCA CCTCTGCGTCGCACAAGAACACAACGTCAAGGTCGAGGTTTCACCCACCTCACCCCCTCAATCTGTTCAGATCTTCAGCC AAGTATGGGTTTTCTCTGAATCCCTAAATTACTGAAATTTCCCTTTTCAATTCCTATTTCCCCCTTTTCCCTATTGGGGT TGTGTTTCATTTGAGAATTTCGTACTCCCAATTGTTTGATTTGTTTAAATCAATTGGCTTTTCCATTTGGGTATCTGTTA GGGCTTAATCTTCAATCGGTGGGCTTTTTGGGTGAATTGGGTTTAGTTTATTTTCAAATCTGAATTATGTCTTATATGTA TGTTTGTTGCTTGATAATTGCTACTGGGATCTGATACTGAATTTTGGAACTAGAATTTGGAATTGGGTGTTTATTTGGTT TTTGGATTTAACCTATGTTTAACCTAAGATGAAATAGCTTGCTATAACGTTAGGAAGTTCCTTCCTCTATGGGCTTAGTT AGTGATCAGCCTTATGTTTTGTCTGTTTTTATTATAGCAAAACAAAAGTGGATTACTATGGTGTTGATGTGCTGACTGGT GTTTTATATGTATGTGTTAGGCTGTGAGTTGCTCTGAGATCATTAAAGAATCAATTTTGGAGATCCCTAAAGCTAAGTTT ATCCCGAATGTGCGATCTGGTAGCTATGCTGAAATTGGGCCGCGGGGATCTATGGATGATGAACACATTCAGATAGATGA TCTAGCTGGGCACCTTGGATTTGTGTTCAAGTGCCCAATGCCGAGTGCGTTTTATGGAGTTTTTGATGGGCATGGAGGGC CTGAGGCAGCTGCTTTTGTTAAGAGGAATGCTATGAGATTGTTTTTTGAAGATGTTGATATGCTGCAATCATACGATACT GATGCACTTTTCCTGAAGGAGTTGGAGGATTCTCATCGGAGAGCTTTTTTACGGGCTGATCTTGCCTTGGCTAATGAAGA AAGTGTTAATAGCTCATGTGGGACTACAGCATTGACTGCCCTTGTACTTGGAAGGCATTTGCTCGTTGCTAATGCTGGTG ACTGTCGAGCAGTTCTTTGTAGGAGAGGCAAAGCTGTTGACATGTCCCATGATCACAGGCCGAGCTATTTACCTGAGCGT AGGAGAGTGGAGGAGTTGGGTGGCTTTATTGATGATGGATATCTCAATGGTTATCTTTCTGTAACTCGTGCCTTGGGGGA TTGGGACTTTAAATTGCCAATTGGCGCTGCATCCCCTCTTATTGCCGAGCCTGATGTTCAACTGATTACTTTGACAGAAG ATGATGAGTTCTTGATCATTGGTTGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTTGCAGTTAGTCTTGTTCGACGC GGATTAAGAAGGCATGATGATCCCCAGCAATGTGCCAGAGAACTAGTCAAGGAAGCATTGCGCCTAAACACATCGGATAA TCTCACTGTGATTGTTATATGTTTGTCCTCCATTGAAAGCACTGTTGAATCATGTCCACCCCAAAGGCGAAGATTCAAAG CTTGCAGTCTGTCTGAAGAGGCCCGCAATAGATTAAAGAGCTTGATGGAGGGAAATTAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0334700.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGGCGGAAGCGGAAATTATCTGTCAACAGAGCATTCCCATGTTGGAGGTCAAGTATCACCTCTGCGTCGCACAAGA ACACAACGTCAAGGTCGAGGTTTCACCCACCTCACCCCCTCAATCTGTTCAGATCTTCAGCCAAGCTGTGAGTTGCTCTG AGATCATTAAAGAATCAATTTTGGAGATCCCTAAAGCTAAGTTTATCCCGAATGTGCGATCTGGTAGCTATGCTGAAATT GGGCCGCGGGGATCTATGGATGATGAACACATTCAGATAGATGATCTAGCTGGGCACCTTGGATTTGTGTTCAAGTGCCC AATGCCGAGTGCGTTTTATGGAGTTTTTGATGGGCATGGAGGGCCTGAGGCAGCTGCTTTTGTTAAGAGGAATGCTATGA GATTGTTTTTTGAAGATGTTGATATGCTGCAATCATACGATACTGATGCACTTTTCCTGAAGGAGTTGGAGGATTCTCAT CGGAGAGCTTTTTTACGGGCTGATCTTGCCTTGGCTAATGAAGAAAGTGTTAATAGCTCATGTGGGACTACAGCATTGAC TGCCCTTGTACTTGGAAGGCATTTGCTCGTTGCTAATGCTGGTGACTGTCGAGCAGTTCTTTGTAGGAGAGGCAAAGCTG TTGACATGTCCCATGATCACAGGCCGAGCTATTTACCTGAGCGTAGGAGAGTGGAGGAGTTGGGTGGCTTTATTGATGAT GGATATCTCAATGGTTATCTTTCTGTAACTCGTGCCTTGGGGGATTGGGACTTTAAATTGCCAATTGGCGCTGCATCCCC TCTTATTGCCGAGCCTGATGTTCAACTGATTACTTTGACAGAAGATGATGAGTTCTTGATCATTGGTTGTGATGGGATTT GGGATGTAATGTCTAGCCAAGTTGCAGTTAGTCTTGTTCGACGCGGATTAAGAAGGCATGATGATCCCCAGCAATGTGCC AGAGAACTAGTCAAGGAAGCATTGCGCCTAAACACATCGGATAATCTCACTGTGATTGTTATATGTTTGTCCTCCATTGA AAGCACTGTTGAATCATGTCCACCCCAAAGGCGAAGATTCAAAGCTTGCAGTCTGTCTGAAGAGGCCCGCAATAGATTAA AGAGCTTGATGGAGGGAAATTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0334700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMAEAEIICQQSIPMLEVKYHLCVAQEHNVKVEVSPTSPPQSVQIFSQAVSCSEIIKESILEIPKAKFIPNVRSGSYAEI GPRGSMDDEHIQIDDLAGHLGFVFKCPMPSAFYGVFDGHGGPEAAAFVKRNAMRLFFEDVDMLQSYDTDALFLKELEDSH RRAFLRADLALANEESVNSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGKAVDMSHDHRPSYLPERRRVEELGGFIDD GYLNGYLSVTRALGDWDFKLPIGAASPLIAEPDVQLITLTEDDEFLIIGCDGIWDVMSSQVAVSLVRRGLRRHDDPQQCA RELVKEALRLNTSDNLTVIVICLSSIESTVESCPPQRRRFKACSLSEEARNRLKSLMEGN
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Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF681
1 360 360 2.6E-179 –
PANTHER
PTHR13832
1 360 360 2.6E-179
IPR015655
Gene3D
G3DSA:3.60.40.10
62 351 290 3.3E-80
IPR036457
SMART
SM00332
63 341 279 5.7E-82
IPR001932
SUPERFAMILY
SSF81606
68 344 277 1.31E-73
IPR036457
CDD
cd00143
72 343 272 7.3498E-84
IPR001932
ProSiteProfiles
PS51746
73 343 271 48.129
IPR001932
Pfam
PF00481
83 335 253 7.4E-64
IPR001932
SMART
SM00331
88 343 256 2.9E-4
IPR001932
ProSitePatterns
PS01032
112 120 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0334700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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