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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0340100 |
| Transcript ID | LotjaGi4g1v0340100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain protein; TAIR: AT4G15840.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q920G9|GMCL1_MOUSE Germ cell-less protein-like 1; TrEMBL-Plants: tr|I1KMY7|I1KMY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0340100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71984776..71990610) extracted from Lotus japonicus Gifu genome v1.2.
AAACTGAACACTTGTTATGGAACAGAATGGTCAGCATCCCAAAAACAAGGCCATGATGTTAAAACGCGGCGTTTCTCTCT CTGAGGTCTGAGCAGCCACGAATGAATTATCATGGGACCTGCGAATTGATATCTGCGAATATCACTGCTCGATCTTCTTG TCGTTGATTGTCATTGACACACAATTAAACACAATGAGAATGACACTGTCTCTCTGTGTTTGATCTCTTCTCTTCTCTTC TCTTCTCTTCTGCATTCATTCATTCATTCATCCTGGCGGTGATGGAGGACCCTCAGTTCCCGAACGACCATCCACCATTC GAACATCCCAAACACTCCGACAACACCACCGAGTTGGGCGCTCTCGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCA AATTGAAGGTTTCAATTCCGGTTCTTTCTCCGATATCGTCGTCAATGCAATGGGCTCCTCTTATCACCTCCATCGTCTCA TCCTCTCCCGCAGTTCGTATTTCAGGTACCCCAATCACAATTACCCATCATTTCCACTTCTAATCATTCACTATCTCTCT ATTTTAGTGTCAGAATTGATTTTATTTTTGTGAGAATTTGGTAAAATCCATCAATTTTTGTCACTGTTGCATGTGGTTGT GCCTTTCAATGATTGGTATCTGTAAGGAGATTTTAAGCTTGAGAGGAATTGATAGAAGAGTAACTATGGTTACTAAGAGA GTTTGGATACTATTTCATTCCTAGCACCTGGTATTACAGCTTTAGTACCTTGAAATGGTTGTGTAAATTGGATTGGAAAA GAAGGCTATAGGTCGGTCTATTAGTTCTTTAGTTTTTGCCCTGTTAAATTACTGGCAATGCGAACTATTTTTCCATGTGT GAAATTCTAAACAAGTATACTAATTTTGCAATATTTACCATGCTCTGTCTTATGACTATATTCATTGGATACCTAAACTT TTTGCATTGTTTTCTTGAGCGTATATCTTTATGTTGTAGTCTTGTAAACATTATTGGATGAATTATGAATGTGCAAACTG TATGGTGAATTAATGACCTATAGTGAAGTTTTTGTTTTTTGTTGGTCTTACATTGCTTCTTTTTATATGATGCGTGTGTC AGGAATATGCTTCATGGACCTTGGAAAGAAGCCAGTGCTCCTGTTCTGACTCTGCATGTGGATGATAAGAACGTTAATGA TGAGGCAATTGCAATGGCTTTGGCATATCTATATGGGCACCACCCTAAACTTAATGATAATAATGCATTTCGTGTTCTTG CTGCTGCTTCTTTTCTTGACCTTCAGGTATGATGTTTACATGATGAGTTGAAGTCCATAGTTACCATGACATTGAATACT GAAGTCATGTTGATGTTAGACCTTTTAACCATTTATATATTTTATTCTATTAGTTCTGGTTAAATTGATTTTGAAATTCT TTCCAATATTCTGTGCAGGATTTATGTGCAATATGTACAGATTTTATCATATCTGAGCTGTGGACTTCTAATTTCTTGGC TTATCAGGTTTAAGGATCAGATGCTTGTATAGCCTCACTTGTTAAATTAAAATAATACCTTACATTTTTTTTATTTAGTT ATTGGTGGTGTATGATTGTAAGTTAGGTGTTTGCGGAGAACCAAGATTATGGTATTCATGGGGAGCGTGTTAGAACTGCT TGTTGGGGCTTCCTTTGTCAAAGTGGTTGCATGGAATTGAAAATGGTAATGAGAAAATAAAAGTGCATGCTTACATCTAG TGTGGTTTTGGTAGTTCTAGTTCCTTATTATGTTTCTTACGAATACACGGATTAAGTGGGATAAAACGACATTTGCTTGT TGCAGGTTCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGAGCTCTAATGATCTATGGATACCCAATGAAGAG AAGCGGTAAGTGGATCTTGAGCCTTTACTTGACCTTTGTGGTTAACAACAGATTGAGTTTCCTAAACTGTTTAACACTTT GTCTAATGCTTTGTAAAAAGGTTTCAATTGGCTTTGCACGCATTCCTGGCAAAAAGTGCTAACTGCAAGGTCGAACATCC TGCACATGGAATCTCTGGTTCTGAGTCTGAAACTGGTATTCATTCTGATTCTGACAACTCCAAGGGAAAAAGTGTAACTG ACACCGGCACTAGTAAGAGACTGGAAACTGACATGGGGAAAATGAGTCTTGAAAGTGATATAAAGGACCCTAGCCCTTCT AATCTTCTAGTTGAGATTGCAGACTTCAACAATAGGGTTTCTGATTCCAATCAACAGGTTCAACAAGCTTCATATGTCAG TTCATCAAACCTGAATCCGGGGTATCCTTGTGACATTGAAGGGCCTACGTTGGGTAATTCTTTGTCTGATACAGATGGGA TGAGAACATCATGTTATGTTGAGGTGCCTCTTGGTACTGAAGCAACTGGTTTGGGAACCACTGGAGTGGGTATTGAAGGG CCATCTGGGGAAGGACCTTGCTGCCATTTGGATAATAGTAATTGGTCAGTTAGAGATCAGTCAAGACATTGCTTTGCATC GAGTTCTTGTAATGGGGTCACATCTAGTGATTGGGGAAGATACAATATTGTTGGCAGAGGACAGCTTAAAGCTTATCCCA GAGGAGACTATAGAGATCATGGAAATGAATACAATGTATTTCTTAGTACATTCGAAGGAGATTCCCTTTTATATTGCAAT ATGTCTTTTGATGCACTTCTAAATGTCAGAAAGCATCTTGAAGAGTTAGGGTTCCCTTGCAAAGCTGTAAATGATGGTCT GTGGCTGCAGGTTGGTATGAAGTTTATTTGACTATTGTAATTAGTTTAGCATTTATCATCTTAAAAAATGCTTATGAATT TCTAGTTACAGTTTTCGTTATGCCTCTATTACAAACTAAGTCTGTCTAAACTGTTGGTTTCCTGCGCAAGAAGCTTCTAA TCCTGAAAGTATTTGGATACGTTATTATTTCAATCTACGCAGATCAATCATTTGATATATAGGTCATTAAACTTGGTGGA GAAATTACTATTCTTGGAAATTATCGGATGTTAAATGTTATTGACATTATTTTTGTTTTGTTTTAACTGTTGTGGCTTTT TAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCGGCTGATACATGCAAAGTTTGCTCCCTTTTGAATAGTGCTTGCAC TTGCATGAAGCAGTTTGCATTTTCACATGGATCTACTACATCCGGATCTTACATGCAAGAACATAATCAGAACAATATGC CTGGGAATGTAGGAAATATATATGTCGCCGAAGCTTCTACAGGCGAAAGAAATGCCCCTTCTAGACATGTACGAGTACAT GTTAGAGGCGCTATTGACGGTCTTGCAGGCCTTGGCCGTGGAACTACATTTGTTCCTGCATCTGCTTCAGCTCCTACAAG ATTTGTCTTTTCTCGTGTACCGTTTGGTGTTGGCAATAGAAGCCAGCCTCAATCTGCAGCCAATGATGATTCAGAGATCC GTCCTGACCTCAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAATACTGGAACA AATGTACATACAGAGCTCACACAAAGGGGTTATGAAATGGGCTTGCAAAGCAATATGTCTGGGACTACTGCTGGAGGTGT AAGCACTAGTGGCATTGCAATGCAGATGCTAGAGACACCAGAACATAACATTGGTTTAGAATGGGAGAATGCCAACAATT CTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCTTTTCGCTTTGGGTAAGTTTACCTCTTGCAACTA TTGACAATTGTCGGTGTAAATAGGATATGTATTGGTAGTTGTCATATGGGCTGGTTTTGTGCCCCAGCTCACATTGAACC ATGCCACAAGCTTGTGGTGGGTTAAGTATATCTGGTAGTCCTCCTCAGTTACTAAGCTAGTATTCGTACTCTTTTCCTTG GAATGGCTTTCAGCTGAGATTTTCATTGCAAACTGGTTGTTGATGCTATTTAGTAGGACTTTTGTCACATATACATCAAA TATTAATACCCTCATATTGTTTGTGGACCACGTTCCTTTACATTTCTCCCTCTTGTTCCCTTTTAGTTGTGTTTCGTTTT ACCCTTTTGACTCTTTTCCCCTCTTCTTGGGGCTGAATCATCTGCTTTGACGATGAGAAGTTATAACACACACTCCCCTC TCTTGGATTCTTCTGTATTTTTTATAGATGTTTCTTATAAATTGAATTTCTGCATCTGATACTTTATGATCAATATACAA TCGGAGTGGGATTTTAGGGGGGCTGTCTTGCAATTTCTGTTATTATTTATTGTATTTATGTGTCAGTTTTATCAAATGAC TTATATTTTGTTCTTTCTCCTACTGCTTCTGTTTGTGTTTCTTTATACTCAAGGCTCCCAAATTCGTGAGTGCTTAGCTT CATCGAGTTATTTAAATATTCTTTAAATTTCTACTGGTTTTGCAGTGTTTGTTTTGAGGATGTGCATAGGCTTGGTGATG GCCAGGTGAAGCATTCTCCAGAAGTTTTTTATGCTGGTTCTTTATGGAAGGTACAAGGACATAAATTAATCATTATATTC TTCTAAGATAATTCCATATGTCCTTGTATGACTAATTTATTTGTTTATGTCTTCAGGTCAGTGTACAAGCTTCCAATGAT GATGACCGCCAGAGACCGCGTACCCTTGGTAATGTTTTAATACATTAAAATTCTCACCTTTGGAATGTGAATCAATATTA ATAGTAAATAAAGAAAACCTTATATTTGTTTGGGAGCTTATTCTTAATACTTTGGCAGGGTTGTTTCTTCACCGTCGAAA GGCAGAGATATCTGATATACATAGAAAGGTCAGCATGACTGTTTTTCATGTTTAAATAATCCAGGCATAAGATAGTTTTG GATTATAAATAACTGATTTTATGGCATGACATTTGTACTTAGCTAGCTGGTTGTCAAACCTTAATTATAAATCTTCAATT AGATGTTAGACATTACTTCATGGTTTATCTTTAAAATTTATTATCAGGTACATATGTATGTTGACTCACGTGAAAAGGTG ACCGCACGCTTTCAGGTAATATCAGTAATCAATTAGAGCTTCAATAATTTTGATTTTTAATGATACTCTATCATTTTGGT TAATAACTGGTTTTTGTTCTGCTTTGCACATTCAGTTGACGTGCCCATCCAAGAGGGAAATAATGGTTTTTGGAAGTTTC AAACAAACGGGTACTCTTCTGCCTAAAGCTCCTAAAGGATGGGGTTGGCAAAGTGCTCTGCTATTTGATGAGCTTGCTGA TCTTCTCCAAAATGGGGTCCTGAGGGTCATTGCTGTAGTACAGCTTGTTTGAATTTAACAGGTTAAATATCAAGTTCATC GCATACCATAGCTGAAAAATGCTTTGTGAAAGGATAAAATTTCTTTCTTTTTGTCCAGAGATGAACGTTGGTTAAGGCCT TAATTGTACAGAATAAAAAATTGAGAATTATGAAGCTGCATATGTTATTTTATGGACAGCATATGAGTGTACTATACAAT ACATAGTTACATACCATTTTTCTCTGCCGTCTCATCTAGTATTATAGCATATTTGGATCCGCTTTTGCTTTCTATTATCA ATTCTGAAATCGAAAAGCTACTAACAGAAGCTTCCCCAATAATTGATTATGACTTTAGAATCAGTTGTAGAATGATTATC AAAATGCATATAGTATATGAGTAAGGCCTCATGTACACGGATGAATACCCTCTATCCCTATTTGGTGTCGGCTTT
CDS sequence (LotjaGi4g1v0340100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGACCCTCAGTTCCCGAACGACCATCCACCATTCGAACATCCCAAACACTCCGACAACACCACCGAGTTGGGCGC TCTCGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCAAATTGAAGGTTTCAATTCCGGTTCTTTCTCCGATATCGTCG TCAATGCAATGGGCTCCTCTTATCACCTCCATCGTCTCATCCTCTCCCGCAGTTCGTATTTCAGGAATATGCTTCATGGA CCTTGGAAAGAAGCCAGTGCTCCTGTTCTGACTCTGCATGTGGATGATAAGAACGTTAATGATGAGGCAATTGCAATGGC TTTGGCATATCTATATGGGCACCACCCTAAACTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCTTCTTTTCTTG ACCTTCAGGATTTATGTGCAATATGTACAGATTTTATCATATCTGAGCTGTGGACTTCTAATTTCTTGGCTTATCAGGTG TTTGCGGAGAACCAAGATTATGGTATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTTCCTTTGTCAAAGTGGTTG CATGGAATTGAAAATGGTTCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGAGCTCTAATGATCTATGGATAC CCAATGAAGAGAAGCGGTTTCAATTGGCTTTGCACGCATTCCTGGCAAAAAGTGCTAACTGCAAGGTCGAACATCCTGCA CATGGAATCTCTGGTTCTGAGTCTGAAACTGGTATTCATTCTGATTCTGACAACTCCAAGGGAAAAAGTGTAACTGACAC CGGCACTAGTAAGAGACTGGAAACTGACATGGGGAAAATGAGTCTTGAAAGTGATATAAAGGACCCTAGCCCTTCTAATC TTCTAGTTGAGATTGCAGACTTCAACAATAGGGTTTCTGATTCCAATCAACAGGTTCAACAAGCTTCATATGTCAGTTCA TCAAACCTGAATCCGGGGTATCCTTGTGACATTGAAGGGCCTACGTTGGGTAATTCTTTGTCTGATACAGATGGGATGAG AACATCATGTTATGTTGAGGTGCCTCTTGGTACTGAAGCAACTGGTTTGGGAACCACTGGAGTGGGTATTGAAGGGCCAT CTGGGGAAGGACCTTGCTGCCATTTGGATAATAGTAATTGGTCAGTTAGAGATCAGTCAAGACATTGCTTTGCATCGAGT TCTTGTAATGGGGTCACATCTAGTGATTGGGGAAGATACAATATTGTTGGCAGAGGACAGCTTAAAGCTTATCCCAGAGG AGACTATAGAGATCATGGAAATGAATACAATGTATTTCTTAGTACATTCGAAGGAGATTCCCTTTTATATTGCAATATGT CTTTTGATGCACTTCTAAATGTCAGAAAGCATCTTGAAGAGTTAGGGTTCCCTTGCAAAGCTGTAAATGATGGTCTGTGG CTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCGGCTGATACATGCAAAGTTTGCTCCCTTTTGAATAGTGCTTG CACTTGCATGAAGCAGTTTGCATTTTCACATGGATCTACTACATCCGGATCTTACATGCAAGAACATAATCAGAACAATA TGCCTGGGAATGTAGGAAATATATATGTCGCCGAAGCTTCTACAGGCGAAAGAAATGCCCCTTCTAGACATGTACGAGTA CATGTTAGAGGCGCTATTGACGGTCTTGCAGGCCTTGGCCGTGGAACTACATTTGTTCCTGCATCTGCTTCAGCTCCTAC AAGATTTGTCTTTTCTCGTGTACCGTTTGGTGTTGGCAATAGAAGCCAGCCTCAATCTGCAGCCAATGATGATTCAGAGA TCCGTCCTGACCTCAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAATACTGGA ACAAATGTACATACAGAGCTCACACAAAGGGGTTATGAAATGGGCTTGCAAAGCAATATGTCTGGGACTACTGCTGGAGG TGTAAGCACTAGTGGCATTGCAATGCAGATGCTAGAGACACCAGAACATAACATTGGTTTAGAATGGGAGAATGCCAACA ATTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCTTTTCGCTTTGGTGTTTGTTTTGAGGATGTG CATAGGCTTGGTGATGGCCAGGTGAAGCATTCTCCAGAAGTTTTTTATGCTGGTTCTTTATGGAAGGTCAGTGTACAAGC TTCCAATGATGATGACCGCCAGAGACCGCGTACCCTTGGGTTGTTTCTTCACCGTCGAAAGGCAGAGATATCTGATATAC ATAGAAAGGTACATATGTATGTTGACTCACGTGAAAAGGTGACCGCACGCTTTCAGTTGACGTGCCCATCCAAGAGGGAA ATAATGGTTTTTGGAAGTTTCAAACAAACGGGTACTCTTCTGCCTAAAGCTCCTAAAGGATGGGGTTGGCAAAGTGCTCT GCTATTTGATGAGCTTGCTGATCTTCTCCAAAATGGGGTCCTGAGGGTCATTGCTGTAGTACAGCTTGTTTGA
Protein sequence (LotjaGi4g1v0340100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDPQFPNDHPPFEHPKHSDNTTELGALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSSYHLHRLILSRSSYFRNMLHG PWKEASAPVLTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQV FAENQDYGIHGERVRTACWGFLCQSGCMELKMVLPKLSSQTLHALLSSNDLWIPNEEKRFQLALHAFLAKSANCKVEHPA HGISGSESETGIHSDSDNSKGKSVTDTGTSKRLETDMGKMSLESDIKDPSPSNLLVEIADFNNRVSDSNQQVQQASYVSS SNLNPGYPCDIEGPTLGNSLSDTDGMRTSCYVEVPLGTEATGLGTTGVGIEGPSGEGPCCHLDNSNWSVRDQSRHCFASS SCNGVTSSDWGRYNIVGRGQLKAYPRGDYRDHGNEYNVFLSTFEGDSLLYCNMSFDALLNVRKHLEELGFPCKAVNDGLW LQMLLSQRVQEIAADTCKVCSLLNSACTCMKQFAFSHGSTTSGSYMQEHNQNNMPGNVGNIYVAEASTGERNAPSRHVRV HVRGAIDGLAGLGRGTTFVPASASAPTRFVFSRVPFGVGNRSQPQSAANDDSEIRPDLNGDLSGDGLTALVGLSQGGNTG TNVHTELTQRGYEMGLQSNMSGTTAGGVSTSGIAMQMLETPEHNIGLEWENANNSSISLDLKTPLSHFPPFRFGVCFEDV HRLGDGQVKHSPEVFYAGSLWKVSVQASNDDDRQRPRTLGLFLHRRKAEISDIHRKVHMYVDSREKVTARFQLTCPSKRE IMVFGSFKQTGTLLPKAPKGWGWQSALLFDELADLLQNGVLRVIAVVQLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 13 | 850 | 838 | 4.1E-282 | – | |
| Gene3D | 22 | 184 | 163 | 2.6E-25 | – | |
| CDD | 44 | 147 | 104 | 1.02037E-22 | – | |
| Pfam | 44 | 148 | 105 | 4.0E-14 | ||
| SUPERFAMILY | 44 | 148 | 105 | 2.2E-19 | ||
| ProSiteProfiles | 50 | 120 | 71 | 12.722 | ||
| SMART | 50 | 150 | 101 | 4.1E-14 | ||
| MobiDBLite | 239 | 289 | 51 | - | – | |
| MobiDBLite | 267 | 283 | 17 | - | – | |
| MobiDBLite | 600 | 621 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0340100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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