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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0341900 |
| Transcript ID | LotjaGi4g1v0341900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|A0A0B2P5Q8|A0A0B2P5Q8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0341900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72159470..72164840) extracted from Lotus japonicus Gifu genome v1.2.
GGGGAGTCGAAGTAAAAAAAGGAAAGATGTTGACAAAAGACAAAAGAGTCTCTCCCAAACACAAAGAGAGTTCCATTCAC AATTACTTGTTGATCTCTTGTGGTGTGTAGTGTAATGTGTGCCATCCAATTTCGATGTTGACAGTCACAGATTCCCCCAC TTCTTCCTTCACCCTTACGCACAATCCAACGCAACCTAAACTATTTTCCTCACACCCCTTTTCTGATTTGCTTTCTCTGT TTCATCGTTCTTCTTCTTCCACCTCTCTCTCTATATAAACTCGTCTCATCTCTCTTCCTCTGTATAGCCACATTCTCAAT TCCTCTATCGCTTCTTCACTCTTCATCATCTGTTGGCAACTGAGGTAAGTGCTTCTTCTTTTTCTTCCAATTTCAATACG TTCTGTTTGGCTGGATATGTATGTGAAATGTTTCTGTTTTGTGTTGTCTATAATGGGTTTCTGTTGTTTTACCAAAATAA CAAATAAAGTTATTGGCTTGAATCAAAATCATGACTTGCATCTCGGTACCATGTCTGCAGTAGTGTTTCATTCATCCATG TTTGTATTGCATTCTTTCTCTATGTGAATGGAACTGGTCTTGTGGTTGGGCTGTCAGCAGTGTAGCTTGATTGAGCTAAT TAGATTTTCAAACATAAGAATTACACACCAGCATGATCAATTACAAAAATATAAACTGAAAGCTATGTGGACAGGTCCCG CCAAACAAGATACTTGCGAGACCTTAACGTTAGGACAACGCTGGGCAAGGCGAGTCAACGGAGGAGCTCGCTAGTGTCCA GATAGGCTTAGTTAGGCGTATGGGTTGATACTAAGGCCCAATAGACCATAGACAAGGCCCAAATGTAATAGATTAGGGTA AATGTAATAGCCCCACTATAAAAGGCTAACCCCCATTCAGAATGAGGAAGGTTCTCTCTTATGTTCAACAATGGCTACCA TAAACCCTAGAAAAAGGACCTCATTGTTCATGTAAGAACACTATGTGATTGAACTTTTATTATCTCCCTGCAGATATGCA GTGGCTACAATGCTTGGGGTGGGGTAGTTGGTGCTAACATTACTGTATAATTTTAGACTTTAGTTTGATTTTAACGGTTT TTCTTTGTCAGATATTGTAATTCATTTGGGCTAGCACCACCACCATGATTTGGACTGTCATTCCTTTACTTGATGTCAAC CTTTCTTAATCCGAATGCATGGTCGACAATCATAATAAAAGATCTTATATCCTATACCCAATAAAAAAAAAACAAGTCTT TTAATGATCACTAGAAAGCTATAGATTCATTTGTACAACATTAAAAATTCCCCATAAGGTCTATAAGATCCATCAAAATC TTAAAAATAAATAAACTGGCCAGACATGGAAGCCAATGCTGATAGCCTGATACTGTAAAGCTATAAGCCAGCAGTCCGTG AATTTCAGGTCTATTATGTATGGTTCAAGACATCAATTATAGAGTGCTTGTTGTTATCATGTCAAGTTGTTACTTCACCG TCGTTTTCACCGTGCTTTTTGCGTGGGATTTTGTTTTCTACCAGAAGTTGAGTTTGCAAGCGGAGGGGATCACTGATAGT TTTAGATTGAAACTATTCAGCACCATCCTCTTCTCTCTCTCTCTCTCTCTCCCATTCCTCATTTCCATGTTTATATCTTT CAGTTGGCTGCTTTACTGGCTCACTAACATGTGGACCTCTGAATGCTCATATTTGTATATACTGTCATATACATTAACTG AAAACTGCCAAAATTGACCCCATTTTCATGGTGGCTATCTATTTATTTTACTATTTTCATTTTTATTTGTGGAGCTTGTA GTTGACGCCTTTGATTTTATTCTTTGAATGATGAGTGATGACACTTTGTTGTCTGGGCATTATTAAGTGGGTGATTAGGG GCTCTTACTAATCTCGGAAATCTGTAATTCAAGTTTTCTATATGATAAAGTGGTTATTTTTTAGTGCATCAGTTTACACA CACAGTATAGAAATTATTTTTGATATGGTCCAATACATATTATAGGATACTGTATTTATTCATTTTAATATATCGACTAC TGATATTGACAGTATTGTGATTGAATTTCTTGATACAGGAAATTAACATGCTTAGTCCTGAAGGAGAACTTAAAATAAGT TTTGGCTACAAATGTAATAGTTATGGAGGTATTCCTTGTAAGACCACCAATGGCTACGAAACCCTTCCTGAAGTTCGTAG GACAAGTAGTTTCTCTTGTTTGTCAGGCGCAGCCTTAAGTGCAAATGCCACACTAGCCAACACAAACATCTGCAATGGTA AGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCACCAAATTCCTTTCGTAAAGTACCCTCTTCGCCAAGTCTTTCAAAG TTGGACAGATTATCATCTTCCCTCCCAAGTAATCTATCTTACCTAAGCTGCAGTCCTTCTACTCCAAGTGATATCCTTGA ATATGACTCTTGCACATTAAAATCCATGAGTGATACTCCTAGAAGTGAAGGATTTCTTAATGCTGGTGAACTTCAAGTCG CAGGAGGAGCAGCTGGCGAAGATAGAGTTCAAGCAGTTTGCTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGAT GGCTTTAATGGGAGAGATGCGGCTGACTTTCTTGCCGGTACCCTGTACGACACCATCATATCTTACTTGAATAAGTCAAT TTTGGGATTGGAGCCGGGTTCCATTGAAACTTCTAACAATGTGGATTTGGGTGAATCCCTCCTGAATAAGTTGGATGGTA GTCTTATTTTTCAGGAGGATCAATCTCTGTCGACATTTACGGGGAGAAATGATTCTAATCATGGTTTTGCAAAGGATAGT CTATCTACTAAGTCTGGAGCATCATGTGAGTCATCTTCAAACGGGGTACTTGATAGCCTCCAAAGCGCACTTAGTCAGGC TGAAAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCGTGTGTTCTGC TTTTGCTTCTTCATGGTAATGATTTGTACACACTTAATCTAGGTGATAGCAGAGCAGTATTGGCTACATGTGGTGCAGGT GACACAATAAATAACCGTGATAGACTCCAAGCTATACAGCTTACTGACAGTCATAATGTTGATAACGAAGCTGAAAGAGC AACACTTCTTGGTGATCATCCTGATGATCCGAGGGTCATTGTAGGGGGAAAAGTGAAAGGTAAACTGAAGGTTACTCGTG CATTCGGGGTTGGCTACTTGAAAAAGGTTGGTATTCTCTCTTACATTTTGGGGAGCATTTGGATAAATAACTTAATTAAG ATCTTATGTCAATAAGCATTTATCGCATAAGCGCTAATTCATAAGTTAATTAGAGAATTATTTTTGTAATAAGATCAACA TAGGTTATAGGTAGGTGTATAAACGCTTATTCATTAGCTAATCTGAGTAGTTTATGAAAATAAGCTCAAAACAATTTATA TATAGGTCATAAGCTATTTACATAAGCTCTCCTTGACATTTGCATAAGCGCTTATGCTATAAGATAAGCTCATCCAAACA AGACCCGAGTGAATGGGGTGCAAAGAATTAATCTTTGTCCTACCAAAGAGATTTATTTTCTTATTTTCCCCCATGCAGAA GAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGCGATCTTAAGAGCCCGCCATATGTTTCCACTCAACCATCAG TGAATGTCCGAAAAATCTCAAATTGTGATCAATTTGTTATACTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGAT GAGGCAGTAAAGCTAGTGGAGTCTTATATCTTGAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAGCTTGT AGTTAGAGCAGCTGATTCTGCAGGTCAGGTTCTAGGTCTTATGCTAAATTAGTTTTATTTGCATGAATATAGCTTTTTAT AGACTATATAGACACATTGGTCCTTAAAAGATACGACATCAGCCAACTTAATCCCCGAAAGATGGAAGTTGGCAAAATAG TCTCTGTAAGATGAAAACAGATCAATTTAATTCTTGAAAGACGAAAATTGTGGTCAATCTGGTCTTTGAAAATTAATAAG GTGATTCATTTTAGTCCCTGGGAGAACTAAATTGAATTTTTTCTTCATCTTTCAGTGTAGTTTTGAGCTAAACTGGCCGA CCTGAAATTTTTCCGGGACCAAAGTGACTATTCAGTCGGTTTTTATATGTTGTGTTATTAAGTAAAGCTCTTGCAGGTTT CAGCATGGAAGAGTTGATGAATGTTCCGGCAGGGAGGAGAAGAAAGTACCATGACGATGTGACGGTAAGTGTGATCATGC TTGGGATGAATCAGCGGACTTCAAAGGCTTCAACTTGCATCTAGGACAGGCCAAAAGGAAAACTTGCATCTAGGTAGCTT TTCATTGATCAATCTTGGTGAAGTAGTATTTGCTAGGGTAAGTTGTGATATAGTGTACATATGTCATTTTATAAGAACCA TTGGGTCCTTTCTGGGGTTGCTATCTCCAGCACTGCAAACATGTAAGTATAGTTTCTTTTCATTGTGTAGACCTTGGGCA TCCCCAATCTACCAAAAGGGCATGTATTTTAACGCTAAATTGCATGATTGGATTCATTTGTTTAGTTAAATAAATAAGAG TCTAAGGACTTGAGAGCAATATTTTTTGTTGGGATCAGGGTATCCAACACTGCCACCAGTGAATAATTCCCTTGTTGCAT GTGCTAGCACTATGCGGTAAATGACTGATCACCAAATGTATTTCATTTTCATGAGTGAGGACCGAGCCTCCAACTTCATG GTTAAGGGATGAGGTAAGCATTCGCGCAACAACTGGTTATTTGAGAGGGGGCTTAAAGAGCATTTTGATCTATTTAATTA TATATATATTGATGGCACTTCATTTCACTTGAATGCAAGACTGGTTGTTTCACCTATCATTAGCTTTTAATCTTATCGGG CTTCAATTCAAGCTTCTGATAATGGACTACACTTGACACATGCTTCTTCCTTACTTTAATGCTTTGTGCACTTTATTTCA TTGATGTTCACGAAGGGTCCTACGTCCTCCACGGATCAATCTGAAATTCTGAATGACTCACATGGGTGGCTTAACAACAT TGAAAATGAAGGGTTTTTAGCTAAGCAAAATTGTATTGAAAGTGAGTATGATAAGAACCTTGGGAGAACCACACCACAAA AGCTAGCTATTGTAGTTGGAGAGCCCAATGCCTTATAAACCCCACATTAAAATCCCATACTTCCAATGTGGGACTCAAGT CCCATACCTTG
CDS sequence (LotjaGi4g1v0341900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTACAAATGTAATAGTTATGGAGGTATTCCTTGTAAGACCAC CAATGGCTACGAAACCCTTCCTGAAGTTCGTAGGACAAGTAGTTTCTCTTGTTTGTCAGGCGCAGCCTTAAGTGCAAATG CCACACTAGCCAACACAAACATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCACCAAATTCCTTT CGTAAAGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACAGATTATCATCTTCCCTCCCAAGTAATCTATCTTACCTAAG CTGCAGTCCTTCTACTCCAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATACTCCTAGAAGTG AAGGATTTCTTAATGCTGGTGAACTTCAAGTCGCAGGAGGAGCAGCTGGCGAAGATAGAGTTCAAGCAGTTTGCTCTGAA GAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCGGCTGACTTTCTTGCCGGTACCCTGTA CGACACCATCATATCTTACTTGAATAAGTCAATTTTGGGATTGGAGCCGGGTTCCATTGAAACTTCTAACAATGTGGATT TGGGTGAATCCCTCCTGAATAAGTTGGATGGTAGTCTTATTTTTCAGGAGGATCAATCTCTGTCGACATTTACGGGGAGA AATGATTCTAATCATGGTTTTGCAAAGGATAGTCTATCTACTAAGTCTGGAGCATCATGTGAGTCATCTTCAAACGGGGT ACTTGATAGCCTCCAAAGCGCACTTAGTCAGGCTGAAAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTC CAGATTTAGTTTCTATTGGATCGTGTGTTCTGCTTTTGCTTCTTCATGGTAATGATTTGTACACACTTAATCTAGGTGAT AGCAGAGCAGTATTGGCTACATGTGGTGCAGGTGACACAATAAATAACCGTGATAGACTCCAAGCTATACAGCTTACTGA CAGTCATAATGTTGATAACGAAGCTGAAAGAGCAACACTTCTTGGTGATCATCCTGATGATCCGAGGGTCATTGTAGGGG GAAAAGTGAAAGGTAAACTGAAGGTTACTCGTGCATTCGGGGTTGGCTACTTGAAAAAGAAGAATCTGAATGATGCTTTG ATGGGAATCCTTCGAGTTCGCGATCTTAAGAGCCCGCCATATGTTTCCACTCAACCATCAGTGAATGTCCGAAAAATCTC AAATTGTGATCAATTTGTTATACTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTAGTGG AGTCTTATATCTTGAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAGCTTGTAGTTAGAGCAGCTGATTCT GCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCAGGGAGGAGAAGAAAGTACCATGACGATGTGACGGTAAGTGT GATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCTTCAACTTGCATCTAG
Protein sequence (LotjaGi4g1v0341900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSPEGELKISFGYKCNSYGGIPCKTTNGYETLPEVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSF RKVPSSPSLSKLDRLSSSLPSNLSYLSCSPSTPSDILEYDSCTLKSMSDTPRSEGFLNAGELQVAGGAAGEDRVQAVCSE ENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLNKSILGLEPGSIETSNNVDLGESLLNKLDGSLIFQEDQSLSTFTGR NDSNHGFAKDSLSTKSGASCESSSNGVLDSLQSALSQAENDFLYMVEQEMEERPDLVSIGSCVLLLLLHGNDLYTLNLGD SRAVLATCGAGDTINNRDRLQAIQLTDSHNVDNEAERATLLGDHPDDPRVIVGGKVKGKLKVTRAFGVGYLKKKNLNDAL MGILRVRDLKSPPYVSTQPSVNVRKISNCDQFVILGSDGLFDFFSNDEAVKLVESYILSNPFGDPAKFLIEQLVVRAADS AGFSMEELMNVPAGRRRKYHDDVTVSVIMLGMNQRTSKASTCI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 29 | 520 | 492 | 1.8E-167 | – | |
| PANTHER | 29 | 520 | 492 | 1.8E-167 | ||
| Gene3D | 116 | 519 | 404 | 3.8E-78 | ||
| SMART | 127 | 508 | 382 | 1.3E-48 | ||
| ProSiteProfiles | 136 | 510 | 375 | 35.463 | ||
| CDD | 149 | 508 | 360 | 1.70217E-40 | ||
| SUPERFAMILY | 150 | 511 | 362 | 5.23E-45 | ||
| Pfam | 258 | 464 | 207 | 2.7E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi4g1v0341900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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