Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0347800 |
| Transcript ID | LotjaGi4g1v0347800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G18840.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16; TrEMBL-Plants: tr|G7JJ10|G7JJ10_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi4g1v0347800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72670525..72678304) extracted from Lotus japonicus Gifu genome v1.2.
TTCCAAATATTAAATCTTGCACAATTTTGTGGTACTTGCACCGTAGCGGGACCCTTCCATAAAATTCCAATGATCACAAT CAATCAGTGGAAGTATCTTCAATCTAGGATAGTTGTATAAATACCTTACAACACACATCATGTTTTTCATGCCCTCTGTT AGTATCACATTCACAGCATTGTTTTTAACTTCTTGGGGGGCTGTTTCATTATTCTTGTGCTACTCATTTTTTGAGGTCAC ATTACTGTTGAAGAAAATGACAATTGAGCAGCACAAGGATAATGAAAGTATTGGAGAAGCCAATGGGCTTTTTCATGATT TGCATGAGCCCTTGATTCTACCTGGAAAAGATGATGTTGGTTCATGTAAAGATATTGAATCTAATAAAAGGGTGGAAAAT GGACCCATTGGAATGGTTCTGCTTAGCACTTTTGTTGCTGTTTGTGGCTCTTTTGCATTTGGAACTTGTTTAAGTATCTT TACTATTTATGAAATGGGAAATACTAAAGGTTACGATACAAAATACAAGAAGTGGTCGTATCCTCCACTACCCCTCATGA TTTTAGCCAAATAACATAGTTAGTGTTGACACATCCACATTTCTTGCAGCTTTCATACTAAATATTTTGTACTCAATAAA CCAAAAAACAAAAAGGTTTCTATTTTCAGCTCAAGTTATTATTTTGGCAGGTGGGGTATTCAGCACCCACTCAAGCAGCT ATCAGAGCATATCTTAATCTATCTCTTTCTGAGGTTAGTGTTCTAATTCCCACCTCATTGGAATTTTCTGTGTACCATAT TGTTTGAAAGAAAACTAACATTGTTTTGTGGGGAGTTGCAGTTTTCCATGTTTGGTTCGTTAGTAACAATTGGTGCTATG CTTGGTGCTATAACAAGTGGCCCGATCACAGATTTTATTGGTCGGAAAGGGGTATGTGACATGTAAATTCCCAATAGGGC TGCATATGGAAGGACTAATTTGATTTTAAGCATTTGGATAAACGTATGAAAATAGCTTATGACTTACATATGAGCTATTT TGAGTTTATTTTCATTAGTTGTTCATATTAGCTTATGAATAAACTCTTATACCTGATATAAACTATTTTGAGGTTGTTTC AATAAGCTTCTCAAATTAGCTTATGATAAGCACTTATTGAACTAAGCCATTTTCCAAAATGCACTCTAAATATATGTACT TTATAGGACCTTTCCATATTAACAAGTCTTAATTTTCATGGGAATACACAGGCAATGAGAATATCAACTGGATTTTGCAT AACAGGATGGTTAGCTGTGTTCTTTTCAAAGGTATGCATCTTCTGCACAATATTCATCTTGAGAAAAATGTTGCAAAATG GGAAAAAGAGGTTTCACTTGTGTTACTCCATCTACTGCAGGATCCTCTCTCCCTTGACATGGGAAGATTTTTCACAGGAT ATGGAATTGGACTGATCTCATTTGTGGTAACTAACTATACAACCATACAAATTTTTTTACTTTGATTCAGAAAGTTTAAG AGCAGGCCTTATGTTGCTTCTTGATGCCTATATTTCAGAATTTTAACAAACCATATCAAAATGTAACAGGTCCCTGTGTA TATAGCTGAAATAGCACCAAAGAATCTTAGAGGTGGACTTGCAACAACAAATCAGGTGGGGGAATATAAAGAGTTATTAT ATTTGTTTCTTTTATTAAAAGTTAATCTTTCTTAAGAAGAATGTTGGATTTGACTCTAAATGTTTTGCAGCTTATGATTG TTATTGGAGCATCAGTATCATTCTTACTAGGAAGTGTCTTAAATTGGAGAAAACTAGCTCTAGCAGGTATGTTATAATAT TTATACCGTGTATAGTTGTGCGGTGAAAAGTCCCATAATTGCTTCTGGTGAAAAGCTACAAAGTGTAGTTTTTGGAGTTA CTGTGCTTTAGATTGTGTGTCATTACCAGTGCAAACATGCTATTAGCTTTTTATTGTTACATAAGGTATAACCACGGTTT GTCTTAAACTTTGTAGGGCTTGTTCCTTGCATTTCCTTGCTGATTGGATTGTGCTTTATCCCAGAATCCCCAAGATGGCT GGTAAACATTAAGCTAGAATCTAAAGCCCAAATTGGCAATTGTTTTCTTCTTTGAAATGGTCATAAGAGGAAGATAACAA TGCAAATTAATAAGCTAAAAACAATTTCATTTTCCAGGCAAAGGTTGGCCTTGAAAAAGAATTTCAAGTAGCTTTAAGGA GACTGAGAGGGAAAGATGTTGATATTTCTCAAGAAGCTGAAGAAATTCTGGTACTTTCCAAGCTCCCTGAACCAATTGAA CATGTTTGAGATGTTTCCTGATCAATTTGACATGCTTCATAAGCTAAGCTGACTTATTTTTCTTTAAATAGGATTATATT GAAACTCTACAAAGCCTTCCTAAAACTAAGCTTCTGGATTTGTTCCAAAGCAAACATGTTCGCTCTGTTGTTGTAAGTAA CATAAATTTATAGCAAAAAATAAGATTAGTGTGTAACTATTTAGAAGTTTCTAAATGTTTGAAATGATTTCAGATTGGTA TTGGGTTAATGGTATGTCAACAATCTGTTGGAATTAACGGTATTGGATTTTACACAGCAGAGACTTTTGCAGCAGCAGGT GAGAAGAAAATACATGCTGATTTTGAAAATTCAAAATAGCTCTTTTTCTTCTGTCATATATATTCATTGCCCTACAACTT GATTTGCAGGACTTTCTTCAGGAAAAATTGGTACTATTGCCTATGCTTGTATGCAGGTAGTTTATCCCTTATTTCTCAGG CATCAATCATGTGAAACTACACTTTTCTGTTTGAACTCCATCTGTTAAAATAAATGGCAGGTTCCATTCACTGTATTGGG AGCCATTTTGATGGATAAGTCTGGAAGAAGACCACTTATAATGGTAAATACGTTTTCAGGCATTTATAGCTTGTTTGTAT CAACTTTTTTTCCGCAGAATGAATTCTGATACCTGGAAGCTACTTAGTACTCACAGAATTGACTTTGATTTTGGAATGAA ATTGTAGATGAATTTTCAAACATGCACTTTTAATAGCACTATTAAAAAGTAAGAGGAGAAAGAGCTATTTTATGCCTAAT TGATTTGCCTATGCATGTAGGCTTCTGCAAGTGGAACATTTTTAGGTTGCTTTATTACTGGAATTGCTTTCTTTCTCAAG GCAAGTTCATAATAATCATATTTTCCCCATAGATTGTGAGTTTGCATCTCAATTACTAATAAATTCTCATATTCTGCTTT ATGATTCCATGGACCAGGATCAGAGCTTATTGCTTAGGTGGGTGCCAATATTAGCAGTTGCTGGAGTGCTGGTGAGTCTT CTTCTGAAAATGTTGATCCCCCCAAAGTTAATTTATTACATTTTCTTTAAACTCAAATTTCATTTTGACCTGAAATTGTA TCATCTTTTTGTTGGCATTGCTTATAATCAGATATACATAGCAGCATTTTCAATAGGAATGGGACCAGTTCCTTGGGTAA TAATGTCTGAGGTATGCATATTTGACAAAATAGACTTGAATGATTTTAGGGCTCTTGTAGTGTATCTTTTATGAATGATT ACTTTCTTTTCCTCTTCTTCACCCCGTAAGAGTGCATCTTTGCATCAGCTTCTCTTTTATCAAAATCAATTTTGAGATCC AGAAGCTAATCACATAACGTCCTCCCAAAATTGATTATGGCTTCAAAATTAATTGTAGTGCATGTTTGGATAGACGATGG AAAACCACGGTCGATAAAAACATCTTCTCTTAGCTTTTGTGACTGTCCACCATGATTCGGACCATATCATGGTTTTCCAC CATGTATCCAAATATGCACATTGTAGTGTTGATAGTGCTTGGTATACCTATGGAAATTTTCTAATATTAGATTTCATATG GCAGATCTTTCCCATACATGTGAAGGGAACTGCAGGGAGCTTGGTGGTATTGATAAACTGGCTAGGTGCTTGGGTAGTTT CATATACTTTCAACTTTCTAATGAGTTGGAGTTCTCCTGGTAAGCACAGTGAACAAAGCCTCTGAGTTGGTTAGCATTAT TAGCATTAGCATTAGCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA TTATTATTATTATTATTATTATGACTAGTCTAGGAGCTCCTCTTTCTAATCCATAATATATACATTTAGGGGTTTTTCTA GGTCCCGTCATCGCCTGTGTGGCACCTCCTAATTGGTTAATATATGAAAAAATCCTACATGGCATGCATTTCTTCATTCA TATTATCCTACACCTTTATTCTTAACCTACACTCACCTCTCTTTAATACCAATAATTAATTCCAATTATCAAAACACGTT TTTGCCCTCTCTCATCTATTTTCCTTCTCTGCCGTTTCACTCATCAGCATCTCTTCCATTTTTTCTTCACCGATGCCCTC CTCCTCTGAAATTTTCCATTCCGCGATAGCCTCTTTTCTCTGATCGACGTCGTGGCATTACGGCCCTTTTACGGTTGTAA TCGGCGGTCTCATCCCTCCCCATGCTCATATCCACCCTCTCCTAACCGAGTATAAGATCAATAACATCAAAAAGCGTGAT ACGAATTCTCACAGCGTCCTCGACTCTGGTACGTGGTTTTTGTACTCCAGTACTTTAGTCTTCTTCCTGACCGGATATTG ATTGTGAAATCTGGGTTTTGCAGGCCAATACAGATTCCATGGTAGTTTTTCGTTGGCGACTGCGAGTTCGACTTTGTCCA ACAAATTTGCGGGATGAGGTAGCAGGTACTAGAAATTTGAATATTTTCTTTTGTGGAGAACTAACATTAAGGCTGCTCAT AGCTTAATTCCTGTTTTTTTCTTCATGCTTGCCATTTTATTGGTTGAAATCTAGGATTTTCCTCTCTCAGTTAGATAGTT GATCTTCTTTATTCCATTCACTTTAAAACCTATGCTTATATTTGTTTGTTTTTGGCACTTCATAGCATCACCAACCACAC GGTTTCCAGCTGAGTATGTGCAAGAATTTCAGAATTGTTTTGACAGATCTCCTGCAGTTCCTGTGTCTGAATCCTCGAGT TCATCATGGCTGCAAGTTTGACCTCATCGCCATCTCAGGTATGTTCAAAGCAGGATTTGGTTTTTATTCCTTTTTCAAAA AAATTGGTGATTGATTAGTTTCTTATTCGATGCTGAATCTGTTGATTAGTTTCCTAATCTGCTTAGTTGCCTTATTTGTA ATTCAAGAACAGATTTCATTGTCAATTTTTTCTCATTTTGACCATGTCCTTAAATCACTCTACCTATCAAGCTTCAAATT AGGACATTTATTTCCTTCAATCACGTTATGTAACGTTTTTTTATTTATGCCAAAACATTTGTTACTGTTTTTTTTTTTTT TAAAGAGTAAGAATCTGCACTCATGAGATCAGAAGAGATAATCAAGCAAATCTGCACTCTAGAGCCATTATATCCAGATT TAAAATCAATCAATGCCACAATCTTCCAAATTTGAAAAAGAAGTTTCAAATTCAAATTTGAAATTTGACCAGCCAAGCCC CTCTCTTTTTACCTATTTCTGGAACTTATTATCCCCTGAAAAAGGGAATCCCGTAAATTTCTGATCAGGCGTAACATTCA ACTTCTCTTTTTGATAATTACTTTTTTCTGTTACACTTTCAAATTAGTGCGTTTAAACAAAGGTTCTTCATTTCAACTCT TTCTTTGTTATTACTTGGTTGCTTGATCATTGTTTGACTCTTTTATTCAGTGTCAGAGATTATCTTTGTTGTCGCTGCTA TTTTGATGGTCTAAAATTGCACTCTTTGTTTGCCTTCTTTCTTTGCATATTGATGTTAATCTGATTTAGTTTTGTGGTAT GCCATTCGCAAGATAATTCTTGAACTGAATTCAAATCCAAAACATCACTCAATCATGCATTGGCTTCAGGTATTCCTTTG TTTTGTTAATCTGATGCTAACTTTCTTTTGTATTAATCAGGAGAAAAATGAAGAACTTTGCTTATGCGCAATAGCAGGGG ATAAAAGAGTTTTAATGTATGTTAAGTACATTGTCATGTACTATACTTTCATGTAGAATCTTCCATCCTACTTTCAGGTA ACACTGTTCATTCTCGTGTTATTTTTTATCCTGTTAGATGTGTTATTGTAGATTCCTGCACTCGGGTCACGGTTTATGGG AGGGAGAGTATTAACCGAAAAGTACACGCTCAAGCTTCAATTTAATTGAATTTATATAGAGATAGAAATAAAAATTCAAA ATGAGGTTTATATTTTAGGCTATATATTTATGCTGAGACTCTTTTGAATTTCAATTTTTTAGGGCACGCTACCTTCACAT TTCAAAGAAACATTCAGAGAATCAAGGATGCGGAGGTGTGAGCATTTCCTTTATACATGTGTGTGTTCCCGCCATTGCAG GATTATGGTAACCAGGTAAGCACTACTCCTAGCAAAATTAAGGTCAGTTGCTTCTACACAATTAAAAGGTCAACAAATAT AATATGGCTTATTATTTATATGAGTTCGTACAATTGATGTAGCTTGGACTGAGGTTGGATATGTTGTTCAGTATTACTTT GAGAATGAAAATGAGGCAGAAAATCAGCAATAACGGGGTGGTTCAGTTAGTTTTTGACATTATAGCCATCTTATGGTGAA AGGGAAAGGAAAACTATAAATCATTATCATAGTGTTTCTGCTTCAGGTATGTTTCTTCCTTCATTTTTAGCTTCCCTCGT CAGTTTCTCCATTTCCCCCCTTTCTTTATCAATTCATGTGTTTCTAACTATTTTTCTTTCTTATCACTAATTTTTGCTTT GCTTATATCTTTGCAATTGAAGGTTTTATGCCTTGGTTCACTTTGATATGGTGAGTCATTTTATGTGCACATATGTCATG ACTTCAGTATTTTTAATTGCTAATGCTATCCCACTATTTATCATTATATTTAATATTCTGTTATGTATATCCCGCTTCAT AATTTGTTTCGTTTGATCTATCTTCAATTCATTTTATCTTTCACCATCATTCAATTTTTTGATATTTGTTAAAGGTTACT CAAGAAGTCAATTTCTGAAACGAGCTATGGAGCGGATGGAATCAGATAACAGTTAGGAGTAACAGTGGCAGAGATATTGA GGGAGAAAGGGAAGCCAGCCTAGAAACTTGGAAGAGATTTGAAGCTCAGCAGGTTATTTTCTTTATTTTATGTGATTTTT ATGTATGACTAATATTAATAGATTGAGTTTTTGGTATAATTCTTATTCTATCATATTTCTGATTACATTATTTCTGAGGA TATAGAATTATTCAGTAGTTATAGTTTTGCTGCCTCAATAACTCATAAGTTAGCAGTCCAAAACCCCGAATGTGTAACTG TTTTCGGAAGTTTTTTAGAGCTTTTATAAACTAACCTCTCTACATTTTGTGTTTCTGATGTTCCTAGGAAATGTCAAAGA CCCAAGAGGTACCACACAATGAGGATGGATTTCAAACATGAAGCAAAGTAATTGAGCAGCTTTGGTCTCATTGACCCTGT TGTGTCGATTGTGATGTGATTCAGCTTTCCTTCAATTTTTCATTGATACCTCTTACGAATTTGTTGGATGTTTCTAGGTC TTTCTAATCCTTCTTATAATTTTGATTCTGAATTACAGTATTAATTCATAATGAATTTGCTTATTAAATTGGTCTCCAAT ATATAATTCTTTTGTTTTTC
CDS sequence (LotjaGi4g1v0347800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGTTCGTTAGTAACAATTGGTGCTATGCTTGGTGCTATAACAAGTGGCCCGATCACAGATTTTATTGGTCGGAA AGGGGCAATGAGAATATCAACTGGATTTTGCATAACAGGATGGTTAGCTGTGTTCTTTTCAAAGGATCCTCTCTCCCTTG ACATGGGAAGATTTTTCACAGGATATGGAATTGGACTGATCTCATTTGTGGTCCCTGTGTATATAGCTGAAATAGCACCA AAGAATCTTAGAGGTGGACTTGCAACAACAAATCAGCTTATGATTGTTATTGGAGCATCAGTATCATTCTTACTAGGAAG TGTCTTAAATTGGAGAAAACTAGCTCTAGCAGGGCTTGTTCCTTGCATTTCCTTGCTGATTGGATTGTGCTTTATCCCAG AATCCCCAAGATGGCTGGCAAAGGTTGGCCTTGAAAAAGAATTTCAAGTAGCTTTAAGGAGACTGAGAGGGAAAGATGTT GATATTTCTCAAGAAGCTGAAGAAATTCTGGATTATATTGAAACTCTACAAAGCCTTCCTAAAACTAAGCTTCTGGATTT GTTCCAAAGCAAACATGTTCGCTCTGTTGTTATTGGTATTGGGTTAATGGTATGTCAACAATCTGTTGGAATTAACGGTA TTGGATTTTACACAGCAGAGACTTTTGCAGCAGCAGGACTTTCTTCAGGAAAAATTGGTACTATTGCCTATGCTTGTATG CAGGTTCCATTCACTGTATTGGGAGCCATTTTGATGGATAAGTCTGGAAGAAGACCACTTATAATGGCTTCTGCAAGTGG AACATTTTTAGGTTGCTTTATTACTGGAATTGCTTTCTTTCTCAAGGATCAGAGCTTATTGCTTAGGTGGGTGCCAATAT TAGCAGTTGCTGGAGTGCTGATATACATAGCAGCATTTTCAATAGGAATGGGACCAGTTCCTTGGGTAATAATGTCTGAG ATCTTTCCCATACATGTGAAGGGAACTGCAGGGAGCTTGGTGGTATTGATAAACTGGCTAGGTGCTTGGGTAGTTTCATA TACTTTCAACTTTCTAATGAGTTGGAGTTCTCCTGGTAAGCACAGTGAACAAAGCCTCTGA
Protein sequence (LotjaGi4g1v0347800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGSLVTIGAMLGAITSGPITDFIGRKGAMRISTGFCITGWLAVFFSKDPLSLDMGRFFTGYGIGLISFVVPVYIAEIAP KNLRGGLATTNQLMIVIGASVSFLLGSVLNWRKLALAGLVPCISLLIGLCFIPESPRWLAKVGLEKEFQVALRRLRGKDV DISQEAEEILDYIETLQSLPKTKLLDLFQSKHVRSVVIGIGLMVCQQSVGINGIGFYTAETFAAAGLSSGKIGTIAYACM QVPFTVLGAILMDKSGRRPLIMASASGTFLGCFITGIAFFLKDQSLLLRWVPILAVAGVLIYIAAFSIGMGPVPWVIMSE IFPIHVKGTAGSLVVLINWLGAWVVSYTFNFLMSWSSPGKHSEQSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 361 | 361 | 9.4E-98 | – | |
| ProSiteProfiles | 1 | 366 | 366 | 36.048 | ||
| PANTHER | 1 | 359 | 359 | 6.3E-224 | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| CDD | 1 | 359 | 359 | 1.00319E-143 | – | |
| PANTHER | 1 | 359 | 359 | 6.3E-224 | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Pfam | 2 | 356 | 355 | 2.3E-77 | ||
| SUPERFAMILY | 3 | 357 | 355 | 2.62E-44 | ||
| TIGRFAM | 4 | 354 | 351 | 6.9E-73 | ||
| Phobius | 28 | 46 | 19 | - | – | |
| Phobius | 47 | 57 | 11 | - | – | |
| PRINTS | 54 | 73 | 20 | 2.9E-18 | ||
| Phobius | 58 | 76 | 19 | - | – | |
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 77 | 87 | 11 | - | – | |
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 88 | 108 | 21 | - | – | |
| Phobius | 109 | 113 | 5 | - | – | |
| TMHMM | 114 | 133 | 20 | - | – | |
| Phobius | 114 | 132 | 19 | - | – | |
| Phobius | 133 | 259 | 127 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| PRINTS | 206 | 216 | 11 | 2.9E-18 | ||
| TMHMM | 233 | 252 | 20 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 260 | 281 | 22 | - | – | |
| Phobius | 282 | 292 | 11 | - | – | |
| Phobius | 293 | 317 | 25 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| PRINTS | 296 | 317 | 22 | 2.9E-18 | ||
| Phobius | 318 | 328 | 11 | - | – | |
| PRINTS | 319 | 331 | 13 | 2.9E-18 | ||
| Phobius | 329 | 349 | 21 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 350 | 366 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0347800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…