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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0347800 |
| Transcript ID | LotjaGi4g1v0347800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G18840.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16; TrEMBL-Plants: tr|G7JJ10|G7JJ10_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi4g1v0347800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72670781..72675129) extracted from Lotus japonicus Gifu genome v1.2.
ATGACAATTGAGCAGCACAAGGATAATGAAAGTATTGGAGAAGCCAATGGGCTTTTTCATGATTTGCATGAGCCCTTGAT TCTACCTGGAAAAGATGATGTTGGTTCATGTAAAGATATTGAATCTAATAAAAGGGTGGAAAATGGACCCATTGGAATGG TTCTGCTTAGCACTTTTGTTGCTGTTTGTGGCTCTTTTGCATTTGGAACTTGTTTAAGTATCTTTACTATTTATGAAATG GGAAATACTAAAGGTTACGATACAAAATACAAGAAGTGGTCGTATCCTCCACTACCCCTCATGATTTTAGCCAAATAACA TAGTTAGTGTTGACACATCCACATTTCTTGCAGCTTTCATACTAAATATTTTGTACTCAATAAACCAAAAAACAAAAAGG TTTCTATTTTCAGCTCAAGTTATTATTTTGGCAGGTGGGGTATTCAGCACCCACTCAAGCAGCTATCAGAGCATATCTTA ATCTATCTCTTTCTGAGGTTAGTGTTCTAATTCCCACCTCATTGGAATTTTCTGTGTACCATATTGTTTGAAAGAAAACT AACATTGTTTTGTGGGGAGTTGCAGTTTTCCATGTTTGGTTCGTTAGTAACAATTGGTGCTATGCTTGGTGCTATAACAA GTGGCCCGATCACAGATTTTATTGGTCGGAAAGGGGTATGTGACATGTAAATTCCCAATAGGGCTGCATATGGAAGGACT AATTTGATTTTAAGCATTTGGATAAACGTATGAAAATAGCTTATGACTTACATATGAGCTATTTTGAGTTTATTTTCATT AGTTGTTCATATTAGCTTATGAATAAACTCTTATACCTGATATAAACTATTTTGAGGTTGTTTCAATAAGCTTCTCAAAT TAGCTTATGATAAGCACTTATTGAACTAAGCCATTTTCCAAAATGCACTCTAAATATATGTACTTTATAGGACCTTTCCA TATTAACAAGTCTTAATTTTCATGGGAATACACAGGCAATGAGAATATCAACTGGATTTTGCATAACAGGATGGTTAGCT GTGTTCTTTTCAAAGGTATGCATCTTCTGCACAATATTCATCTTGAGAAAAATGTTGCAAAATGGGAAAAAGAGGTTTCA CTTGTGTTACTCCATCTACTGCAGGATCCTCTCTCCCTTGACATGGGAAGATTTTTCACAGGATATGGAATTGGACTGAT CTCATTTGTGGTAACTAACTATACAACCATACAAATTTTTTTACTTTGATTCAGAAAGTTTAAGAGCAGGCCTTATGTTG CTTCTTGATGCCTATATTTCAGAATTTTAACAAACCATATCAAAATGTAACAGGTCCCTGTGTATATAGCTGAAATAGCA CCAAAGAATCTTAGAGGTGGACTTGCAACAACAAATCAGGTGGGGGAATATAAAGAGTTATTATATTTGTTTCTTTTATT AAAAGTTAATCTTTCTTAAGAAGAATGTTGGATTTGACTCTAAATGTTTTGCAGCTTATGATTGTTATTGGAGCATCAGT ATCATTCTTACTAGGAAGTGTCTTAAATTGGAGAAAACTAGCTCTAGCAGGTATGTTATAATATTTATACCGTGTATAGT TGTGCGGTGAAAAGTCCCATAATTGCTTCTGGTGAAAAGCTACAAAGTGTAGTTTTTGGAGTTACTGTGCTTTAGATTGT GTGTCATTACCAGTGCAAACATGCTATTAGCTTTTTATTGTTACATAAGGTATAACCACGGTTTGTCTTAAACTTTGTAG GGCTTGTTCCTTGCATTTCCTTGCTGATTGGATTGTGCTTTATCCCAGAATCCCCAAGATGGCTGGTAAACATTAAGCTA GAATCTAAAGCCCAAATTGGCAATTGTTTTCTTCTTTGAAATGGTCATAAGAGGAAGATAACAATGCAAATTAATAAGCT AAAAACAATTTCATTTTCCAGGCAAAGGTTGGCCTTGAAAAAGAATTTCAAGTAGCTTTAAGGAGACTGAGAGGGAAAGA TGTTGATATTTCTCAAGAAGCTGAAGAAATTCTGGTACTTTCCAAGCTCCCTGAACCAATTGAACATGTTTGAGATGTTT CCTGATCAATTTGACATGCTTCATAAGCTAAGCTGACTTATTTTTCTTTAAATAGGATTATATTGAAACTCTACAAAGCC TTCCTAAAACTAAGCTTCTGGATTTGTTCCAAAGCAAACATGTTCGCTCTGTTGTTGTAAGTAACATAAATTTATAGCAA AAAATAAGATTAGTGTGTAACTATTTAGAAGTTTCTAAATGTTTGAAATGATTTCAGATTGGTATTGGGTTAATGGTATG TCAACAATCTGTTGGAATTAACGGTATTGGATTTTACACAGCAGAGACTTTTGCAGCAGCAGGTGAGAAGAAAATACATG CTGATTTTGAAAATTCAAAATAGCTCTTTTTCTTCTGTCATATATATTCATTGCCCTACAACTTGATTTGCAGGACTTTC TTCAGGAAAAATTGGTACTATTGCCTATGCTTGTATGCAGGTAGTTTATCCCTTATTTCTCAGGCATCAATCATGTGAAA CTACACTTTTCTGTTTGAACTCCATCTGTTAAAATAAATGGCAGGTTCCATTCACTGTATTGGGAGCCATTTTGATGGAT AAGTCTGGAAGAAGACCACTTATAATGGTAAATACGTTTTCAGGCATTTATAGCTTGTTTGTATCAACTTTTTTTCCGCA GAATGAATTCTGATACCTGGAAGCTACTTAGTACTCACAGAATTGACTTTGATTTTGGAATGAAATTGTAGATGAATTTT CAAACATGCACTTTTAATAGCACTATTAAAAAGTAAGAGGAGAAAGAGCTATTTTATGCCTAATTGATTTGCCTATGCAT GTAGGCTTCTGCAAGTGGAACATTTTTAGGTTGCTTTATTACTGGAATTGCTTTCTTTCTCAAGGCAAGTTCATAATAAT CATATTTTCCCCATAGATTGTGAGTTTGCATCTCAATTACTAATAAATTCTCATATTCTGCTTTATGATTCCATGGACCA GGATCAGAGCTTATTGCTTAGGTGGGTGCCAATATTAGCAGTTGCTGGAGTGCTGGTGAGTCTTCTTCTGAAAATGTTGA TCCCCCCAAAGTTAATTTATTACATTTTCTTTAAACTCAAATTTCATTTTGACCTGAAATTGTATCATCTTTTTGTTGGC ATTGCTTATAATCAGATATACATAGCAGCATTTTCAATAGGAATGGGACCAGTTCCTTGGGTAATAATGTCTGAGGTATG CATATTTGACAAAATAGACTTGAATGATTTTAGGGCTCTTGTAGTGTATCTTTTATGAATGATTACTTTCTTTTCCTCTT CTTCACCCCGTAAGAGTGCATCTTTGCATCAGCTTCTCTTTTATCAAAATCAATTTTGAGATCCAGAAGCTAATCACATA ACGTCCTCCCAAAATTGATTATGGCTTCAAAATTAATTGTAGTGCATGTTTGGATAGACGATGGAAAACCACGGTCGATA AAAACATCTTCTCTTAGCTTTTGTGACTGTCCACCATGATTCGGACCATATCATGGTTTTCCACCATGTATCCAAATATG CACATTGTAGTGTTGATAGTGCTTGGTATACCTATGGAAATTTTCTAATATTAGATTTCATATGGCAGATCTTTCCCATA CATGTGAAGGGAACTGCAGGGAGCTTGGTGGTATTGATAAACTGGCTAGGTGCTTGGGTAGTTTCATATACTTTCAACTT TCTAATGAGTTGGAGTTCTCCTGGTAAGCACAGTGAACAAAGCCTCTGAGTTGGTTAGCATTATTAGCATTAGCATTAGC ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT TATTATGACTAGTCTAGGAGCTCCTCTTTCTAATCCATAATATATACATTTAGGGGTTTTTCTAGGTCCCGTCATCGCCT GTGTGGCACCTCCTAATTGGTTAATATATGAAAAAATCCTACATGGCATGCATTTCTTCATTCATATTATCCTACACCTT TATTCTTAACCTACACTCACCTCTCTTTAATACCAATAATTAATTCCAATTATCAAAACACGTTTTTGCCCTCTCTCATC TATTTTCCTTCTCTGCCGTTTCACTCATCAGCATCTCTTCCATTTTTTCTTCACCGATGCCCTCCTCCTCTGAAATTTTC CATTCCGCGATAGCCTCTTTTCTCTGATCGACGTCGTGGCATTACGGCCCTTTTACGGTTGTAATCGGCGGTCTCATCCC TCCCCATGCTCATATCCACCCTCTCCTAA
CDS sequence (LotjaGi4g1v0347800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGTTCGTTAGTAACAATTGGTGCTATGCTTGGTGCTATAACAAGTGGCCCGATCACAGATTTTATTGGTCGGAA AGGGGCAATGAGAATATCAACTGGATTTTGCATAACAGGATGGTTAGCTGTGTTCTTTTCAAAGGATCCTCTCTCCCTTG ACATGGGAAGATTTTTCACAGGATATGGAATTGGACTGATCTCATTTGTGGTCCCTGTGTATATAGCTGAAATAGCACCA AAGAATCTTAGAGGTGGACTTGCAACAACAAATCAGCTTATGATTGTTATTGGAGCATCAGTATCATTCTTACTAGGAAG TGTCTTAAATTGGAGAAAACTAGCTCTAGCAGGGCTTGTTCCTTGCATTTCCTTGCTGATTGGATTGTGCTTTATCCCAG AATCCCCAAGATGGCTGGCAAAGGTTGGCCTTGAAAAAGAATTTCAAGTAGCTTTAAGGAGACTGAGAGGGAAAGATGTT GATATTTCTCAAGAAGCTGAAGAAATTCTGGATTATATTGAAACTCTACAAAGCCTTCCTAAAACTAAGCTTCTGGATTT GTTCCAAAGCAAACATGTTCGCTCTGTTGTTATTGGTATTGGGTTAATGGTATGTCAACAATCTGTTGGAATTAACGGTA TTGGATTTTACACAGCAGAGACTTTTGCAGCAGCAGGACTTTCTTCAGGAAAAATTGGTACTATTGCCTATGCTTGTATG CAGGTTCCATTCACTGTATTGGGAGCCATTTTGATGGATAAGTCTGGAAGAAGACCACTTATAATGGCTTCTGCAAGTGG AACATTTTTAGGTTGCTTTATTACTGGAATTGCTTTCTTTCTCAAGGATCAGAGCTTATTGCTTAGGTGGGTGCCAATAT TAGCAGTTGCTGGAGTGCTGATATACATAGCAGCATTTTCAATAGGAATGGGACCAGTTCCTTGGGTAATAATGTCTGAG ATCTTTCCCATACATGTGAAGGGAACTGCAGGGAGCTTGGTGGTATTGATAAACTGGCTAGGTGCTTGGGTAGTTTCATA TACTTTCAACTTTCTAATGAGTTGGAGTTCTCCTGGTAAGCACAGTGAACAAAGCCTCTGA
Protein sequence (LotjaGi4g1v0347800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGSLVTIGAMLGAITSGPITDFIGRKGAMRISTGFCITGWLAVFFSKDPLSLDMGRFFTGYGIGLISFVVPVYIAEIAP KNLRGGLATTNQLMIVIGASVSFLLGSVLNWRKLALAGLVPCISLLIGLCFIPESPRWLAKVGLEKEFQVALRRLRGKDV DISQEAEEILDYIETLQSLPKTKLLDLFQSKHVRSVVIGIGLMVCQQSVGINGIGFYTAETFAAAGLSSGKIGTIAYACM QVPFTVLGAILMDKSGRRPLIMASASGTFLGCFITGIAFFLKDQSLLLRWVPILAVAGVLIYIAAFSIGMGPVPWVIMSE IFPIHVKGTAGSLVVLINWLGAWVVSYTFNFLMSWSSPGKHSEQSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 361 | 361 | 9.4E-98 | – | |
| ProSiteProfiles | 1 | 366 | 366 | 36.048 | ||
| PANTHER | 1 | 359 | 359 | 6.3E-224 | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| CDD | 1 | 359 | 359 | 1.00319E-143 | – | |
| PANTHER | 1 | 359 | 359 | 6.3E-224 | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Pfam | 2 | 356 | 355 | 2.3E-77 | ||
| SUPERFAMILY | 3 | 357 | 355 | 2.62E-44 | ||
| TIGRFAM | 4 | 354 | 351 | 6.9E-73 | ||
| Phobius | 28 | 46 | 19 | - | – | |
| Phobius | 47 | 57 | 11 | - | – | |
| PRINTS | 54 | 73 | 20 | 2.9E-18 | ||
| Phobius | 58 | 76 | 19 | - | – | |
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 77 | 87 | 11 | - | – | |
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 88 | 108 | 21 | - | – | |
| Phobius | 109 | 113 | 5 | - | – | |
| TMHMM | 114 | 133 | 20 | - | – | |
| Phobius | 114 | 132 | 19 | - | – | |
| Phobius | 133 | 259 | 127 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| PRINTS | 206 | 216 | 11 | 2.9E-18 | ||
| TMHMM | 233 | 252 | 20 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 260 | 281 | 22 | - | – | |
| Phobius | 282 | 292 | 11 | - | – | |
| Phobius | 293 | 317 | 25 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| PRINTS | 296 | 317 | 22 | 2.9E-18 | ||
| Phobius | 318 | 328 | 11 | - | – | |
| PRINTS | 319 | 331 | 13 | 2.9E-18 | ||
| Phobius | 329 | 349 | 21 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 350 | 366 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0347800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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