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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0351500 |
| Transcript ID | LotjaGi4g1v0351500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450 family protein, putative; TAIR: AT3G06150.1 cytochrome P450 family protein; Swiss-Prot: sp|Q96HM7|PED1B_HUMAN PC-esterase domain-containing protein 1B; TrEMBL-Plants: tr|K7L3U9|K7L3U9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0351500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73035316..73037315) extracted from Lotus japonicus Gifu genome v1.2.
ATCAGTCACTCACATTACATTGAAAATCTGAAAGCCACATGTGAGTATTCCATTCAACTAGAACTAGTGTTTTATTTTTT CTTACTACTTTTCCTGTTTTCTCGAGAAAATTGACAATTGTTGTGCCTTTAAAGTGACTTTGGACTTTGAATGTAGTGTT TTTGTCGTTAAAAGATAGCAACTGTTGCGGTTTTGGGTGGAGGGTTTGTTTGTTGGTTGCTGTTCTTGTTTTGGAAGCTA GTTTGTGTGTTTGAGTGATGGCATTGAAGGTAAAGGTAGTGATTTCGCCACCACCAAATCAATGGCCTCTATGGTCCATT CCAGTACTTCATTGGCGTGTTGGGTTGCTCACTGCTTTGGTTTTGGTTGGAATGGTCCTGGTTTGGAGCATTGATGGCTG CACTGTTAAGACCTTCATTCAACTTTGGAGGTATCGTCAAGATTATCAAAATTCACCTTTTGTCTCTCCATATGATCCTG TTAGTTCAGATCAAAGCCAATCCAACACTGAAAAACTTGGCAAAAGCTCCATAAAATCTCTTCTAGTTAAGGGGCATTCT TCAAGTTGGGTTTCAAGTGAATTAGAGCCTAATTTGACTTCAAATCTTCTAGCTCGATGGTCGGCTCGTGGAGGCGAGCC TTGTAAAGATTCCAAGACGGTGGAGATTGCAATTCCTGGGTTGGATGGTGGTGGGAAATTGATGGAGTTATCAGCTGGAG ATGTTCATGAGTTTGGTTTTCAAGCATTGGATGAGTCAGGGAAGGTTCATTGTTCAGGTGGAGATTACTTTGAGACTGAT CTTTCAGGGGAATCATGGAAATCTAGGCCTCTGGTGAAGGATTTCAGCAACGGTTCTTACTCAATCTCGCTGCAAGTTCA TCCTGATTTTGATGGGGTTTACAATCTCACCATAATCCTGCTTTATAGACACTTTGAAGGCCTAAAATTCACACCATGGA GATTTGCCTATGACCGAGTTCTCCGTAATGTTACAATCAGATTCTACAAAAGCAGTGTTCAGATGATGCCAGGATTGCAG ACTTGCAAAGCTTCTGATTTTGCCAGGGATGTTTGGTGTGGAAGGTGGACAAGACATGGCAAGAATGATGACTGCAACAT TGGTAATGATGGTAGATACCGGTGCCTCGCGCCGGATTTTCCTTGCACAGCTCCTTGGTGTGATGGTTCCTTAGGAATTT TGGAGAGTAATGGTTGGGTGTACTCAAGTCACTGCTCTTTCAAGATGTATTCAGCTGATTCTGCTTGGAATTGCTTGAAG AATCGATGGATTTTCTTCTGGGGTGATTCAAATCATGTTGACACAATCCGTAACTTGCTCAATTTTGTGTTAGATTTGCC TGAAGTACATTCTGTCCCCAGAAGATTTGACATGAACTTTTCAAACCCAAGAGACTCATCTCAAAGTGTTAGGATCACTA GCATCTTCAATGGTCATTGGAATGAAACGCAAAACTATCTGGGGTTGGATTCTTTGAGAGATGAGGGGTTTCAAACTTTG TTGAAGAAATACTTCTCTGGGGAAACAATCCCAGACACTATGATCATGAACTCTGGCTTGCATGACGGTGTCCACTGGCG TAACATTAGAGCATTCTCTGTTGGAGCAGACTATGCAGCATCCTTTTGGGGTGATGTTATGAAGACAGTGAAGCAGAGAG GGTTGGCATGGCCAAGAGTGTTTTACAGGACTACTGTTGCAACTGGTGGATATGCTAGATCCTTAGCATTTAATCCTAAC AAGATGGAGGTTTTCAATGGTGTGTTCTTAGAGAAACTGAAGCAAGCAGGAGTTGTATCTGGGGTGATTGATAATTTTGA CATGACTTTTCCATGGCATTTTGATAATAGATGCAATGATGGAGTTCATTATGGAAGAGCTCCATTAAAGATGAAGTGGC GAGATGGTCAAATTGGGCATCAGTATTTTGTGGATCTCATGTTAGCTCATGTTCTTCTTAATGCACTTTGTGCCAGATAG
CDS sequence (LotjaGi4g1v0351500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTGAAGGTAAAGGTAGTGATTTCGCCACCACCAAATCAATGGCCTCTATGGTCCATTCCAGTACTTCATTGGCG TGTTGGGTTGCTCACTGCTTTGGTTTTGGTTGGAATGGTCCTGGTTTGGAGCATTGATGGCTGCACTGTTAAGACCTTCA TTCAACTTTGGAGGTATCGTCAAGATTATCAAAATTCACCTTTTGTCTCTCCATATGATCCTGTTAGTTCAGATCAAAGC CAATCCAACACTGAAAAACTTGGCAAAAGCTCCATAAAATCTCTTCTAGTTAAGGGGCATTCTTCAAGTTGGGTTTCAAG TGAATTAGAGCCTAATTTGACTTCAAATCTTCTAGCTCGATGGTCGGCTCGTGGAGGCGAGCCTTGTAAAGATTCCAAGA CGGTGGAGATTGCAATTCCTGGGTTGGATGGTGGTGGGAAATTGATGGAGTTATCAGCTGGAGATGTTCATGAGTTTGGT TTTCAAGCATTGGATGAGTCAGGGAAGGTTCATTGTTCAGGTGGAGATTACTTTGAGACTGATCTTTCAGGGGAATCATG GAAATCTAGGCCTCTGGTGAAGGATTTCAGCAACGGTTCTTACTCAATCTCGCTGCAAGTTCATCCTGATTTTGATGGGG TTTACAATCTCACCATAATCCTGCTTTATAGACACTTTGAAGGCCTAAAATTCACACCATGGAGATTTGCCTATGACCGA GTTCTCCGTAATGTTACAATCAGATTCTACAAAAGCAGTGTTCAGATGATGCCAGGATTGCAGACTTGCAAAGCTTCTGA TTTTGCCAGGGATGTTTGGTGTGGAAGGTGGACAAGACATGGCAAGAATGATGACTGCAACATTGGTAATGATGGTAGAT ACCGGTGCCTCGCGCCGGATTTTCCTTGCACAGCTCCTTGGTGTGATGGTTCCTTAGGAATTTTGGAGAGTAATGGTTGG GTGTACTCAAGTCACTGCTCTTTCAAGATGTATTCAGCTGATTCTGCTTGGAATTGCTTGAAGAATCGATGGATTTTCTT CTGGGGTGATTCAAATCATGTTGACACAATCCGTAACTTGCTCAATTTTGTGTTAGATTTGCCTGAAGTACATTCTGTCC CCAGAAGATTTGACATGAACTTTTCAAACCCAAGAGACTCATCTCAAAGTGTTAGGATCACTAGCATCTTCAATGGTCAT TGGAATGAAACGCAAAACTATCTGGGGTTGGATTCTTTGAGAGATGAGGGGTTTCAAACTTTGTTGAAGAAATACTTCTC TGGGGAAACAATCCCAGACACTATGATCATGAACTCTGGCTTGCATGACGGTGTCCACTGGCGTAACATTAGAGCATTCT CTGTTGGAGCAGACTATGCAGCATCCTTTTGGGGTGATGTTATGAAGACAGTGAAGCAGAGAGGGTTGGCATGGCCAAGA GTGTTTTACAGGACTACTGTTGCAACTGGTGGATATGCTAGATCCTTAGCATTTAATCCTAACAAGATGGAGGTTTTCAA TGGTGTGTTCTTAGAGAAACTGAAGCAAGCAGGAGTTGTATCTGGGGTGATTGATAATTTTGACATGACTTTTCCATGGC ATTTTGATAATAGATGCAATGATGGAGTTCATTATGGAAGAGCTCCATTAAAGATGAAGTGGCGAGATGGTCAAATTGGG CATCAGTATTTTGTGGATCTCATGTTAGCTCATGTTCTTCTTAATGCACTTTGTGCCAGATAG
Protein sequence (LotjaGi4g1v0351500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALKVKVVISPPPNQWPLWSIPVLHWRVGLLTALVLVGMVLVWSIDGCTVKTFIQLWRYRQDYQNSPFVSPYDPVSSDQS QSNTEKLGKSSIKSLLVKGHSSSWVSSELEPNLTSNLLARWSARGGEPCKDSKTVEIAIPGLDGGGKLMELSAGDVHEFG FQALDESGKVHCSGGDYFETDLSGESWKSRPLVKDFSNGSYSISLQVHPDFDGVYNLTIILLYRHFEGLKFTPWRFAYDR VLRNVTIRFYKSSVQMMPGLQTCKASDFARDVWCGRWTRHGKNDDCNIGNDGRYRCLAPDFPCTAPWCDGSLGILESNGW VYSSHCSFKMYSADSAWNCLKNRWIFFWGDSNHVDTIRNLLNFVLDLPEVHSVPRRFDMNFSNPRDSSQSVRITSIFNGH WNETQNYLGLDSLRDEGFQTLLKKYFSGETIPDTMIMNSGLHDGVHWRNIRAFSVGADYAASFWGDVMKTVKQRGLAWPR VFYRTTVATGGYARSLAFNPNKMEVFNGVFLEKLKQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIG HQYFVDLMLAHVLLNALCAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 15 | 579 | 565 | 5.6E-287 | – | |
| PANTHER | 15 | 579 | 565 | 5.6E-287 | – | |
| TMHMM | 23 | 45 | 23 | - | – | |
| Phobius | 24 | 45 | 22 | - | – | |
| Phobius | 46 | 580 | 535 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0351500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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