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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0357900 |
| Transcript ID | LotjaGi4g1v0357900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein OBERON 3; TAIR: AT1G14740.1 class I heat shock protein, putative (DUF1423); Swiss-Prot: sp|Q94B71|OBE3_ARATH Protein OBERON 3; TrEMBL-Plants: tr|I1K3D1|I1K3D1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0357900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73657435..73661405) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATTAGAACAAAATAAAAAGTCCTACTACTTGCAGTTGAGAAGAAAACCAGAAGTTGCAGTCAAAAAAGAGGATCTC TCTCCACTTGAGAGCAATTCTCTCCATTTTCAAGGGATAAGACTGTCATTCCCAAATGCAGAAAAGCATCGCCGTTTTTG CATAAACAATGTGAACACATGAAAACTCAAAATCCAGCCGTTGCTTCTTCCTGTGCTGCAATCATGTCTCTGTCTCTGTG TTTCTCAATAACCAAACCAATCCAACATCAAACTTGAGATTCTCAAAATCATATAGCCTTGGTTTTCTCTCTGTCTCTTC TCTTTCTTTGTGAAATCTCTCTCTCTTTCTCTCTGTGTTGTTCATTTGACCATGATTGGAAGTAAAGATCTTCCTCATGG TGGTGTTGACTCAGAGGGTGAGAACTCCAGAAACAACCTCTCAAGACACAATTTTGAGCCTAGAAAGGACTACCCAGATG AAAAACTAGGATACCCAGAAAACAAAGGTGTTGAATTTCTCAGAGATTCAATGATGGGTAGTGGTGGTGGTGGTGGAAGC TCAGGGTTTCAAGAACTCACCCTCAGCTACCTTTGTGATAGCTCCAAATTGAATCTTGCTGATCCTGGTGGTAAAAGCTT GCTGAATTCCTTGACACACAAAGGTAAAGAGGTTGTTGTTTCTGAGGTTGCAAATCAAGATGGGAAATGGGTGGAGAGAG ATTTTCTTAGCTTGAGTGAAACCAGAGAGGATTCATCAAAGCGATCTCTTGAGGAAGATGATGTTGAGAGGGGGAGTAAC AGGGAGAAGAAGCCAAAAATGGAGACACTGAATCTATCTCTTGCTTTGCCTGATGTGTCACTTTCTCTCACAGCTTCAAA CGCCTTGCAGAACATTGATCATCACCAACAACAACAACAACCTGTGAGGACTGTGCCTAATAGGCCATCAACTACACATA CTTCTTATTCAAATGATTACACTGCAGCTTCTTTGTCTTACTCTTATTCCCACCAATTCTCACACAACCCAAGTTGCTCT CTCACCCGCAATTCAACTGAGAATTTTGAGTATTCAATGAGCAAAGATAACCAAATTTGGAATTGTGGGGAAGGGACTAA TGGGTCTGTTCATAGCAGGTTCAAGCCAGTAGGAGATGGGGTTGGTTTCTCCAATCATGGTGGTGGTGTTCTCAGTTCTT TCATGCAAGGTAATAGTCAGTATAAAACTAATAGTTCAGATACTCATTCTTTTTTCCCTTCAGAATTGCCTGCAAGACCA AGATTTGAAGCTCAGTCAGGGGATTCAAGGGGGAGGAATTCTGAGAATCTGAGAGTCTTGGAAAGCTTAGATGGTGGGAA GATGAGGAAAATTTCTAGACCTGAGAGAATTGTGAGGGAAATTGTTTCAGAGTCTATACCAGTCATGGCATTGACAATTC CTGAGCTTACTGATGATGTCATAGCATCAACAAAGGAATACTTGAAGAATCTCATTGAGAAGCCTGAGAAGAAAGATGAA TTGGTTAGCCTTCAAAACAGGCTTGAGAGAAGATCTGATCTTACCAAGGAGACTCTTACAAAGTGTAGTAAATTGCAATT GGAGATTTTAGTCACTGTGAAGATGGGGTTGACAAGCTTCTTATCTGGAAAAGTTCATTTGTCTGAGATGGTGGAGATTT TCTTGTATAGGAGATGTAGAAATGTGACCTGCAAGCACTTGCTTCCTGTTGATGACTGTGACTGCAAGATTTGCTCAGGG AACAAAGGGTTTTGCAGCTCTTGCATGTGTCCTGTTTGTTTGAACTTTGATTGTGCAAGCAACACTTGTAGTTGGATTGG TTGTGATGTTTGTTCTCACTGGTGCCATGCTGCTTGTGGTATTCAGAGGAACCTCATCAAGCCTGGGCCTAGCTTGAAGG GGCCTTCAGGGACCACAGAGATGCAGTTTCATTGTATTGGCTGTGGACATGCCTCGGAAATGTTCGGGTTTGTTAAAGAT GTGTTCTTGTGTTGTGCAAAGGATTGGGGGCTTGAAACCTTGATGAAAGAGTTTGACTATGTGAGGAGGATTTTCAGGGG AAGCGAAGATCGCAAAGGGAAGGAATTACATTATAAAACTGATGACATGCTGTTAAAGCTTCAAACTAAAATGGTGTCTC CTTCAGATGCCTCCAACTACATCATTCAATTTTTCAGCTGTAAGTGTCTGGACTCTGGACTATGGTCTTTCCTTTTTACA TTCAAATTTATGTGTTTATTTGCCTCATACAGCATTAGAATGGTGATGATGCACTATGAATAAATCATAATTTGCTTAGT CTTAGAACCAATTCATTTTATTCAATGGATTAAGTAAATCCCTTGATGTGTTAAATTTCAGCTCTTAACCTTTATATTAC TGTACTTAACATTCACCTGATATCAAGGGTTTGGTTTATCATCATTTGGTTATTAGAAGTGAGTAAAAAACCAGTGGTCT TTTTTTTATGATTTGGTAGGATGGTGAATAAGTGACTTGATGTGGTGGGAAAGCATTATATTGATAAATGTGTTGTGCTT CTGAGAGATAAGATATACAATATGTCACAGATTGATAAAATTAGAAAACCCAATGCATTATGCTCTTTGATGCATATTAC TCATTGAACTTGGAGCCCCATTGAGCATCCATGCCTATTTCCATCTTTTTCCTACCTGGTTAAGATATTTACATCTCAGC ATTGGTATTTGAATTTGAAGTGTTTCACTGAGACAAGATGTATTGAAAGAATGTCATTAGTTTCTGAGAACTGCAGCAGT TATCATTATTACTGCTTTCATCCATTTTCATTACATCATAGAGGAATAGTGGAGGAACTGGAAAGATGTATATAAACCTG AGTTGCTTGTAAGGCACAGTTGCAAGCTCTTTGGTTTTGTTGAATGTGTCTGATGAAATAATTCAAACCACACATGACTC TGATTATTTTATTACACATCCTCTTGTATAGAAGGCCTTTTCCTGCTTTAGCTTGGTTCTTGCTATTTGCTAAGCGTTTT GTGATAAGTTCTTGTTTGATTTAATTAATTAGATTATTAACATTGAAATCTGATATCTAACTATTGAGAGATGCTTTTAT TTTTTTCGATAAATAGATGCGGACAGCATGCCGAATTTTCCCGCTTCTGGTATTTCCTCAAAGGATTTGACAGCCTCTCA AGCTAACCTTCCAAAGGACACACCATCTCTTTCAAAATCTAACTCTCTAGTACCAAGCTACGCTTATGACTTGAGCTATT CGAGGTCACATTCTGATGCCGTGACCAATGATCTTCATCAGAAAGACCTCAAAGCTTCCCTATTAAGTGAAGCAAAAAGT GATGCCGATATCCAATTGGCGGCCTTATTGAGAAGAGGCGGTGTTGAGAATTTGGAGAGCATCGTGCGGATAAAGGAGGC CGAAGCCAAAATGTTCCAAACCAAGGCGGACGAAGCAAGGAGAGAGGCAGAAGGGTTCCAGAAGATGATCAGGACAAAGA CTGCACAGATGGAGGATGAGTATGCTGCAAAGCTTGGTAAACTCTGTTTGCACGATACTGAGGAAACGCAGAGGAAGAAA CTGGATGAGGTGAAAGTCTTGGAGAGTTCCTATGTTGATTATTATAAAATGAAAAAGAGAATGCAAGATGAGATTGACGG TTTGTTGCAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTGAATTTGATTATTTTTTGCTGTTTTTCTTGTGTTTTCGA GGATGCTGCTAAAAATGTGTGTAATTTATTGATCTGATTATATGGTGTTCTGGTTGTTTCCAGAATCAATTATTTTCAAT TGTAAAATCGAAGTTTTTGGCATTTAATCTTTCTTTCATAATTTGAGAGGTCATACATACGAAACTTATGAGCAAGTTGT GCAAGAGCTTTGCACTTGCATTTGAGAAAACATCTTAATTAAGCGTTTATG
CDS sequence (LotjaGi4g1v0357900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGGAAGTAAAGATCTTCCTCATGGTGGTGTTGACTCAGAGGGTGAGAACTCCAGAAACAACCTCTCAAGACACAA TTTTGAGCCTAGAAAGGACTACCCAGATGAAAAACTAGGATACCCAGAAAACAAAGGTGTTGAATTTCTCAGAGATTCAA TGATGGGTAGTGGTGGTGGTGGTGGAAGCTCAGGGTTTCAAGAACTCACCCTCAGCTACCTTTGTGATAGCTCCAAATTG AATCTTGCTGATCCTGGTGGTAAAAGCTTGCTGAATTCCTTGACACACAAAGGTAAAGAGGTTGTTGTTTCTGAGGTTGC AAATCAAGATGGGAAATGGGTGGAGAGAGATTTTCTTAGCTTGAGTGAAACCAGAGAGGATTCATCAAAGCGATCTCTTG AGGAAGATGATGTTGAGAGGGGGAGTAACAGGGAGAAGAAGCCAAAAATGGAGACACTGAATCTATCTCTTGCTTTGCCT GATGTGTCACTTTCTCTCACAGCTTCAAACGCCTTGCAGAACATTGATCATCACCAACAACAACAACAACCTGTGAGGAC TGTGCCTAATAGGCCATCAACTACACATACTTCTTATTCAAATGATTACACTGCAGCTTCTTTGTCTTACTCTTATTCCC ACCAATTCTCACACAACCCAAGTTGCTCTCTCACCCGCAATTCAACTGAGAATTTTGAGTATTCAATGAGCAAAGATAAC CAAATTTGGAATTGTGGGGAAGGGACTAATGGGTCTGTTCATAGCAGGTTCAAGCCAGTAGGAGATGGGGTTGGTTTCTC CAATCATGGTGGTGGTGTTCTCAGTTCTTTCATGCAAGGTAATAGTCAGTATAAAACTAATAGTTCAGATACTCATTCTT TTTTCCCTTCAGAATTGCCTGCAAGACCAAGATTTGAAGCTCAGTCAGGGGATTCAAGGGGGAGGAATTCTGAGAATCTG AGAGTCTTGGAAAGCTTAGATGGTGGGAAGATGAGGAAAATTTCTAGACCTGAGAGAATTGTGAGGGAAATTGTTTCAGA GTCTATACCAGTCATGGCATTGACAATTCCTGAGCTTACTGATGATGTCATAGCATCAACAAAGGAATACTTGAAGAATC TCATTGAGAAGCCTGAGAAGAAAGATGAATTGGTTAGCCTTCAAAACAGGCTTGAGAGAAGATCTGATCTTACCAAGGAG ACTCTTACAAAGTGTAGTAAATTGCAATTGGAGATTTTAGTCACTGTGAAGATGGGGTTGACAAGCTTCTTATCTGGAAA AGTTCATTTGTCTGAGATGGTGGAGATTTTCTTGTATAGGAGATGTAGAAATGTGACCTGCAAGCACTTGCTTCCTGTTG ATGACTGTGACTGCAAGATTTGCTCAGGGAACAAAGGGTTTTGCAGCTCTTGCATGTGTCCTGTTTGTTTGAACTTTGAT TGTGCAAGCAACACTTGTAGTTGGATTGGTTGTGATGTTTGTTCTCACTGGTGCCATGCTGCTTGTGGTATTCAGAGGAA CCTCATCAAGCCTGGGCCTAGCTTGAAGGGGCCTTCAGGGACCACAGAGATGCAGTTTCATTGTATTGGCTGTGGACATG CCTCGGAAATGTTCGGGTTTGTTAAAGATGTGTTCTTGTGTTGTGCAAAGGATTGGGGGCTTGAAACCTTGATGAAAGAG TTTGACTATGTGAGGAGGATTTTCAGGGGAAGCGAAGATCGCAAAGGGAAGGAATTACATTATAAAACTGATGACATGCT GTTAAAGCTTCAAACTAAAATGGTGTCTCCTTCAGATGCCTCCAACTACATCATTCAATTTTTCAGCTATGCGGACAGCA TGCCGAATTTTCCCGCTTCTGGTATTTCCTCAAAGGATTTGACAGCCTCTCAAGCTAACCTTCCAAAGGACACACCATCT CTTTCAAAATCTAACTCTCTAGTACCAAGCTACGCTTATGACTTGAGCTATTCGAGGTCACATTCTGATGCCGTGACCAA TGATCTTCATCAGAAAGACCTCAAAGCTTCCCTATTAAGTGAAGCAAAAAGTGATGCCGATATCCAATTGGCGGCCTTAT TGAGAAGAGGCGGTGTTGAGAATTTGGAGAGCATCGTGCGGATAAAGGAGGCCGAAGCCAAAATGTTCCAAACCAAGGCG GACGAAGCAAGGAGAGAGGCAGAAGGGTTCCAGAAGATGATCAGGACAAAGACTGCACAGATGGAGGATGAGTATGCTGC AAAGCTTGGTAAACTCTGTTTGCACGATACTGAGGAAACGCAGAGGAAGAAACTGGATGAGGTGAAAGTCTTGGAGAGTT CCTATGTTGATTATTATAAAATGAAAAAGAGAATGCAAGATGAGATTGACGGTTTGTTGCAGAGAATGGAGGCAACAAAG CAGCAATGGGTTTGA
Protein sequence (LotjaGi4g1v0357900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGSKDLPHGGVDSEGENSRNNLSRHNFEPRKDYPDEKLGYPENKGVEFLRDSMMGSGGGGGSSGFQELTLSYLCDSSKL NLADPGGKSLLNSLTHKGKEVVVSEVANQDGKWVERDFLSLSETREDSSKRSLEEDDVERGSNREKKPKMETLNLSLALP DVSLSLTASNALQNIDHHQQQQQPVRTVPNRPSTTHTSYSNDYTAASLSYSYSHQFSHNPSCSLTRNSTENFEYSMSKDN QIWNCGEGTNGSVHSRFKPVGDGVGFSNHGGGVLSSFMQGNSQYKTNSSDTHSFFPSELPARPRFEAQSGDSRGRNSENL RVLESLDGGKMRKISRPERIVREIVSESIPVMALTIPELTDDVIASTKEYLKNLIEKPEKKDELVSLQNRLERRSDLTKE TLTKCSKLQLEILVTVKMGLTSFLSGKVHLSEMVEIFLYRRCRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFD CASNTCSWIGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKE FDYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYADSMPNFPASGISSKDLTASQANLPKDTPS LSKSNSLVPSYAYDLSYSRSHSDAVTNDLHQKDLKASLLSEAKSDADIQLAALLRRGGVENLESIVRIKEAEAKMFQTKA DEARREAEGFQKMIRTKTAQMEDEYAAKLGKLCLHDTEETQRKKLDEVKVLESSYVDYYKMKKRMQDEIDGLLQRMEATK QQWV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 44 | 44 | - | – | |
| MobiDBLite | 19 | 44 | 26 | - | – | |
| PANTHER | 22 | 804 | 783 | 0.0 | ||
| PANTHER | 22 | 804 | 783 | 0.0 | – | |
| MobiDBLite | 124 | 151 | 28 | - | – | |
| MobiDBLite | 177 | 200 | 24 | - | – | |
| MobiDBLite | 281 | 320 | 40 | - | – | |
| MobiDBLite | 281 | 295 | 15 | - | – | |
| PRINTS | 355 | 377 | 23 | 1.1E-55 | ||
| PRINTS | 394 | 409 | 16 | 1.1E-55 | ||
| PRINTS | 433 | 454 | 22 | 1.1E-55 | ||
| Pfam | 442 | 565 | 124 | 1.2E-36 | ||
| CDD | 472 | 531 | 60 | 2.41886E-30 | – | |
| PRINTS | 479 | 499 | 21 | 1.1E-55 | ||
| PRINTS | 552 | 571 | 20 | 1.1E-55 | ||
| Pfam | 666 | 793 | 128 | 3.1E-40 | ||
| PRINTS | 700 | 720 | 21 | 1.1E-55 | ||
| Coils | 706 | 740 | 35 | - | – | |
| PRINTS | 739 | 761 | 23 | 1.1E-55 | ||
| Coils | 782 | 802 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0357900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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