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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0360300 |
| Transcript ID | LotjaGi4g1v0360300.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxisomal (S)-2-hydroxy-acid oxidase; TAIR: AT3G14420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q9LRR9|GLO1_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; TrEMBL-Plants: tr|I3S358|I3S358_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0360300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73919289..73924073) extracted from Lotus japonicus Gifu genome v1.2.
CAGAAGATGGACTTGATAACTAATGTCTGTGAGTATGAAGCAATTGCAAAGCAAATATTGCCAAAGATGGTGTATGACTA CTATGCATCAGGGGCAGAGGACCAGTGGACTTTGAAAGAGAACCGAAATGCCTTCTCAAGGATTCTGTAATCTACTTTTC TCTGGACTTGGGACCTCAATTCATCTTTCTGGCACCCTAGAAACTTCTTTTTTATTCAAAATCTAAGTTCACTTCTCCTT TGATCACCATGGACACATCATGATTTTCCCCTGTTATGAGATTGGAACTAATGTTTCCTTTATTTAATTTTCATCTTCCT CTTAGCCATGTTCTCTTTTAGCTGAAGCCATTTCTTAATATATGTTTGGTGTACTTAAAACAGGTTCCGGCCCCGTATTC TTGTTGATGTAAGCAGGATAGACTTGACAACAACTGTATTGGGCTTCAAAATATCAATGCCTATCATGATTGCCCCTACA GCCATGCAAAAGATGGCTCACCCTGAAGGTATGTCTTCAAACTAATTGGTCCTTGTTACATTAAGATGTTGCCTTTGCTT CAAGTATTTTGTTGTTGTTGCTAATTTGTTATGTATAATACAATACTCTCAGAAAGGCTAAAATACAGACTTATGCGTTC CCATACCTTAAGTTGGAATGATCATAGGAAGAGGTCTAGAATGCCATAATCTGTAGTTTCCTTGCATTTAATTAAATGAG GAGGTATCGTGTGTCTCCCAGTATAAAGAAAGCGATATACCGAAAGCTTATGGAGCAAGTACATACTGAAACTAATGAAG GTTTTGTGTACTTTATCTCAGTGATTGCAGAAACAACAGAGAAACAAAAGGAATACCATAATTTCTTGTTGTCCAATTTC AGTCTTGTTTTCTGTTTGGTTGGTTTTGTTGTAGTTCTTTCATTATCCTTCTAGTAAAGGATCTTGTTCTCCTCTCCTTG TTTCTCTCTTCTTTCCTAACGAATTTTATTTAAATCCATATGCACTGTTACAACGTGAACACCAGAAAAATATTCCACAA ATGATTGAACCGGATAATTTTTGTCGGGGCTGTATCGAATTTTACTCTGTGTAACCAACTTGACTGTTATCACTGGACTG AGAGCTCAAGTACATAAGGCAGGATTGAAGAGGTTTTACTAAATAATAATGCCACAAGAACTTTCCTTTCTGAAGAAAAA ACTTCTCCGCTGATATCCTTTCTTAAACAGGACTACAATCCACATGAAGCAAAATAAGTTGTGAGAAAAATCTATCTCAT ATTAGCCTTTTTGGGTGAAAAGTCCATGAAGTTAAGACCAAGTCAAAATTGTTTTCTTAAATGTTTGCAATGAATTCAAG ACGAACTCAGGAAAACTAGTATTTTCAAATGAAACAGAAAAGGTTTGGGTTTGGGGTACTTCTTGAAAATGTGCTTTATT TTATTTTTAAAGAAACAGAATGCTCCAATAGTGTACATCATCCTACTGTTGAGATTGTTATTCCTAGTATATACTTCAAA AATCAAATTATAAATGCATCAGAAGTCGCTGATTCTGCTACAATTGATGAAAGCTTCTAAATTATAACAAACTATGCAAC TTTTGTGCAGGAGAATACGCTACCGCTAGAGCAGCATCAGCAGCTGGCACAATCATGGTTTGCTTCCCATCCCATCATAT TTGTTCTCTAATTTAGCTTTATTGCCAAACAAGATTCTTTGTAGCTTTCATAGTATTTTACTCTAAAATGAAATGGTGGA GGCCTACTTACCTGCATGCATTTGTTGTAGTTGTTTACTTTCTGGCAGATTAATTTTCATTATATTTTGTCACAGACATT ATCCTCATGGGGTACTTCTAGCGTTGAGGAGGTTGCTTCAACAGGACCTGGCATTCGTTTTTTCCAACTCTATGTGAGTA TATTGCCTTTATGTCTTCTTCTCATTATTAAGTTTCCTGGGATGCTAGTCACAAGTCTCTCCCTTGAACACAATAACATT TCCATGTCATGAAAAAATTTCCAAGCATCTCAGTTTGACTGAGGAATTCACTTTTAAAACATGACTTGTCACATAGTTCC TTTTCTTGTTGCACTTTTAGTAATCTTTCAATGTGTTGGCCTGCATACTGCCCACATGGCAATTTATTGCTTTGACTTCG CTTCCTACAATTTTTACTTGAAAAGATCATAATGGTTTCACAAGACATTTCTTTTCCTTCCACTAAGTAGCTTCTTACTC TTATGCAATAATTTCATCCATACTCCCTTTTAGTAACAAAATGTTATCCTATTTGCTAAAGTTAAACAAGCACTGATATG ATTATCCGAAATTCTCAACTAACATGTTTTGTAACCTAATATGTTGCTGTTCTATTCTTCTCTTAGGTGATTAAAAACAG AAATGTGGTTACTCAGCTGGTGAGAAGAGCTGAAAAGGCTGGTTTCAAGGCAATTGCCCTTACTGTGGACACTCCACTTC TTGGTCGTAGGGAGGCTGATATAAAAAACAGGTTAGCAATCATTTGGAAATATAAATGGGAAGAGTCTTTAACTTTACAT GGGTCACCAATCACCATGGTTGAATTGATAAATTATCTACTTTTAGTCTTAACTCTTTAGATATTTACTACTAGCTTGTT TGATGGGCATTTGTACAGATTTACATTGCCATCACACCTGGTATTGAAGAATTTTGAAGGATTGGATCTTGGAAAGCTGG ATGATAAGGTCAGTATTTAGAATGAAATTTAGAAATCAGATTTTGTTTTATTATTGATAGAATTAGTTATTACTGTTGTT TTTTACTGTTTGCGCTTACCTTGCAGACTAATGACTCTGGTCTAGCCACTTATGTTGCTTCGGAGATCGACCGGTCACTC AACTGGAAGGTGATATGGATATTTCACTTATATGATTTCCTAATCCTTGACATTGAATGTAGAAGTAATACTTTGATAAC ACTTGTCAACAGGATGTGAAATGGCTTCAAACAATCACCTCATTGCCAATTTTAGTGAAGGGTGTACTTACCGCTGAAGA TAGTAAGGCTGTCAAACAGATATACTCAGATGCTGCCTGTCCATTTGTCTTTATTAGGGTTGGTTGTTCTCTCAATCTTG AAAGTAATCCAATATCCTATAAATGCAGCTAAGATGGCTATAGAAGCTGGGGCTGCTGGAATCATTGTTTCCAATCACGG AGCTCGCCAACTTGACTATGTCCCTGCAACTATTATGGCTTTGGAAGAGGTACTGCATCCTAAACATTTCTGGAATTTTT TTGGATTAACTGAAATAGAATGAATCACTTCTTGACAGAATGACAGTCTCATTAAGGCCCCTAGTGGTAGCATCCCACAT TTCTTGATTGTCTAATTTTGGTTTCTAGTGCTTAGAAGTCTTGGTTATGGAACTTGAGACTTGCCGATTCTTTGTTCGAT CTAAGTCAGCCATGTATTATGAATTAAAACTTAGAAGCTGTTATATTTTGAATCATTCTAAGATTCTTTTTTTTTCTGCC TTGTTTTCTTACTCAGTGGTTTCATTTCTTTTCTTTTCAATTTTTCATTTCGTCATGATACAAAATAAGCTTGCTTTGTT TGTAAAGACGCGTGGAGAATTTTATATGATATCTCTTACAACCTTCCTTAAACAAGAGCTCTTTTAGACTTAAAGTACAA GCTCGCTTATCTGGGGTTAGAATTCAACTTTTTCATGAGAAGAATGAGGGCGAGAGTAATTGAATTTAGACCATAGTCTT GGAGAATTTGTTACCGTGTCACGAACCAACTCTCCTGAAAGTTTAAGCTGTTTACGTTTTTATATTATCTCTAAAAAGGT CATATTGAATAATTTCCTCTTTCTGTTTGTTAACATAATGGAAATATTGCTGCTAGTTTTCCATCATTTTTAATCTCTTA GCTATGAGTAGAAATTCTATTTTTAAAATATTGTTTTCTTCAACCTCATTGCATGAATATTCTCCCCCCCCCCCCCCCCT CCCAACACACTCACAGACACCCAAAATAAAGATAATCCTTTTTAATTAAGTTTTTGTTTGCTTTGCCTTGAATAGGTTGT GAAAGCTGCACAAGGAAAAATTCCTGTTTTCCTGGATGGCGGAATCCGCCGAGGGACAGATGTTTTTAAAGCATTAGCTC TCGGAGCATCCGGTGTATTTGTGAGTATATGAAAGTTTGATTCACCACCATAGAAACTTAACTGTTGAATGCTTAAAGTG ATACTGATTGATACACACAGCTTGTTTACCTGACTGAAGCCTATCATCATCATCATAGAGATGTAGTCCGGGATACTAGC CCCCAAGTTCCATATAGAAGCATATGTTTCAGACTTCAGAAATTTTGTCAGAATATGAATGTACCAACTGCCAAGGAAAC TTTTGGAATATGCTACTCCTCTCTCTTTTTCTCTGTTTTTCAAGTTTGACCAAAACTTTGCCAATTTGGTCCAAAGATCA GATGCTTCAGAAAAATGTTGAATAATCTATTATTGTAGTACTAGTGTTTCATTAGAGGAGGATGGTCTAATATGATCTAG CTAACTATTACTGTATTCATCTTTCATCTCAAATTTCAGATTGGAAGACCAGTGCTGTTCTCATTGGCTGCTAATGGTGA GGCTGGTGTAAGAAAAGTACTTCAGATACTCCACGATGAGTTTGAACTAGCGATGGCATTATGCGGATGCCGTTCACTCA AGGAGATAACTCGTGATCATGTTGTGACTGAGTGGGATCGCCCAAGAATTGCTCCCAGATTATGA
CDS sequence (LotjaGi4g1v0360300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTGATAACTAATGTCTGTGAGTATGAAGCAATTGCAAAGCAAATATTGCCAAAGATGGTGTATGACTACTATGC ATCAGGGGCAGAGGACCAGTGGACTTTGAAAGAGAACCGAAATGCCTTCTCAAGGATTCTGTTCCGGCCCCGTATTCTTG TTGATGTAAGCAGGATAGACTTGACAACAACTGTATTGGGCTTCAAAATATCAATGCCTATCATGATTGCCCCTACAGCC ATGCAAAAGATGGCTCACCCTGAAGGAGAATACGCTACCGCTAGAGCAGCATCAGCAGCTGGCACAATCATGACATTATC CTCATGGGGTACTTCTAGCGTTGAGGAGGTTGCTTCAACAGGACCTGGCATTCGTTTTTTCCAACTCTATGTGATTAAAA ACAGAAATGTGGTTACTCAGCTGGTGAGAAGAGCTGAAAAGGCTGGTTTCAAGGCAATTGCCCTTACTGTGGACACTCCA CTTCTTGGTCGTAGGGAGGCTGATATAAAAAACAGATTTACATTGCCATCACACCTGGTATTGAAGAATTTTGAAGGATT GGATCTTGGAAAGCTGGATGATAAGGATGTGAAATGGCTTCAAACAATCACCTCATTGCCAATTTTAGTGAAGGGTGTAC TTACCGCTGAAGATAGTAAGATGGCTATAGAAGCTGGGGCTGCTGGAATCATTGTTTCCAATCACGGAGCTCGCCAACTT GACTATGTCCCTGCAACTATTATGGCTTTGGAAGAGGTTGTGAAAGCTGCACAAGGAAAAATTCCTGTTTTCCTGGATGG CGGAATCCGCCGAGGGACAGATGTTTTTAAAGCATTAGCTCTCGGAGCATCCGGTGTATTTATTGGAAGACCAGTGCTGT TCTCATTGGCTGCTAATGGTGAGGCTGGTGTAAGAAAAGTACTTCAGATACTCCACGATGAGTTTGAACTAGCGATGGCA TTATGCGGATGCCGTTCACTCAAGGAGATAACTCGTGATCATGTTGTGACTGAGTGGGATCGCCCAAGAATTGCTCCCAG ATTATGA
Protein sequence (LotjaGi4g1v0360300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLITNVCEYEAIAKQILPKMVYDYYASGAEDQWTLKENRNAFSRILFRPRILVDVSRIDLTTTVLGFKISMPIMIAPTA MQKMAHPEGEYATARAASAAGTIMTLSSWGTSSVEEVASTGPGIRFFQLYVIKNRNVVTQLVRRAEKAGFKAIALTVDTP LLGRREADIKNRFTLPSHLVLKNFEGLDLGKLDDKDVKWLQTITSLPILVKGVLTAEDSKMAIEAGAAGIIVSNHGARQL DYVPATIMALEEVVKAAQGKIPVFLDGGIRRGTDVFKALALGASGVFIGRPVLFSLAANGEAGVRKVLQILHDEFELAMA LCGCRSLKEITRDHVVTEWDRPRIAPRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 340 | 340 | 114.105 | ||
| PANTHER | 1 | 194 | 194 | 2.8E-210 | – | |
| PIRSF | 1 | 340 | 340 | 1.7E-133 | ||
| PANTHER | 1 | 194 | 194 | 2.8E-210 | – | |
| Gene3D | 3 | 347 | 345 | 1.3E-150 | ||
| SUPERFAMILY | 4 | 337 | 334 | 3.91E-109 | – | |
| CDD | 9 | 332 | 324 | 2.12513E-166 | ||
| Pfam | 14 | 336 | 323 | 1.3E-128 | ||
| SMART | 41 | 336 | 296 | 0.0061 | – | |
| PANTHER | 195 | 345 | 151 | 2.8E-210 | – | |
| PANTHER | 195 | 345 | 151 | 2.8E-210 | – | |
| ProSitePatterns | 233 | 239 | 7 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0360300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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