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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0361200 |
| Transcript ID | LotjaGi4g1v0361200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inositol transporter; TAIR: AT1G30220.1 inositol transporter 2; Swiss-Prot: sp|Q9C757|INT2_ARATH Probable inositol transporter 2; TrEMBL-Plants: tr|A0A151REP7|A0A151REP7_CAJCA Putative inositol transporter 2; Found in the gene: LotjaGi4g1v0361200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73995116..73998190) extracted from Lotus japonicus Gifu genome v1.2.
GAGTTACTATGGTTGAACTATGTTGTAACACTACCGAGTCTAGTCTGTGACCCAAAACTAGTCTGCGTAGACTCGCGAGT CTAATGACTGTGGTTGAATCATGTTGAAGCAATGTGACTATTGCAGGAAGCCATAGTGAGTACTGCAATTGCTGGAGCAA TTCTAGGTGCTGCAGTAGGTGGATGGATGAATGATCGTTTCGGAAGGAAATTTTCGATCATCATTGCCGATATACTATTT TTTATTGGCTCTGTGATCTTGGCGTCTGCTCCCAACCCAGCTGTTCTCCTTGTTGGCCGTGTTTTTGTTGGCCTTGGCGT CGGAATGGCTTCAATGGCGTCACCCCTCTACATTTCGGAGGCTTCACCGACTAAGGTTCGCGGAGCCCTTGTGGCTCTCA ACAGTTTCCTCATCACTGGCGGACAATTCCTTTCCTACCTCATAAACTTGGCCTTCACTACGGTGAGAAACTACCCTTAA CCATGTTCCAAAATACTCTTTTTTTATACTCGCTACAATGCTACTTGTTTTAATGATTTGTGATATAAATTATTATAATG TTCAGTAGTTCATATCAAATTCCTTTTAATCTTGTGTATGGTAAAAAATTTGAGCGCTAGCCCCACGAGAATATGGATTC TTGTCCTTGATAAGCTTAGTTTATGATGTTGTTAATCACTCAAATTTTCTTGTATGTTGAATTGAAATTTTGTATCTCAT CAACTTGGCCCTCACTAAGGTGAGAAAAACTACCCTTATCAGATATCATGTTCCAAAATCTTCTTTTTACTTGCTACTTT GTTTTAATGATTGGTGATATAGTGTAGTAAAATGTTAAGTAGTTCATGTTTGATCCATTTAAGTAAAGTCTCAGGTTCAA GTCTTGTATATGAAAATAAAAAATTTCATAAGAGAGCTAGCCCCACAAGATCGTGGATGCATAGGGCTCGAACATGATTG TCTCTAATAATGTTAATGAAACTATTAAACATGTTTAGTTTATGATGCTGTCTTACATGAATAATCACTCAAATTTTCTT GTATGATACTATTAAAGTTGTGCTGCACCTTATTATGTGGTGATTGAAATTGTGGTTACTTTTTTATTCAGACACCAGGG ACATGGAGGTGGATGCTTGGGGTAGCTGCAGCACCTGCTGTAATCCAAGTGGCCCTAATGTTTTTCCTCCCAGAATCACC GCGTTGGCTCTTCCGAAAGGTTAGTTGAATCAGCACATTCATCATGCATCTGACTTGTTCTATTTGATTTTTTTTTGTCT GAGAAACAACTCACTTTTCTGCTGTTCTGTTTTGTCATTCCAGGGAAGGGAGGAGGAAGCAAAAGAAATTCTGAGAAAGA TTTACGCCCCTGACATGGTCGAAGCCGAGATTCAAGCTCTGGAGGAGTCAGTTGCCTTGGAAAAGAAGGAATCAGAAGGC GAAAAGGTCACCCTGATGACACTGCTGAAAACCAAATCTGTGAGGAGAGGTTTGTATGCAGGAGTGGGCCTCCAATTCTT CCAGCAGTTTGTGGGGATCAACACTGTCATGTACTACAGCCCGACCATTGTTCAGTTAGCTGGTTACGCGTCGAATCGGA CAGCCCTGCTTCTATCTCTGATCACTTCTGGGCTGAATGCATTTGGTTCAATTCTGAGCATTTTCTTCATTGACAGAACT GGGAGGAAGAAACTTGCTTTGATCAGTTTGTGTGGTGTTGTTTTTTCCCTGGTCCTAATCACTTGGTCATTCAGATTGAC TGAAACTCATTCCCCAATGATCAGTGCAGTGGAAACCTCTAGCTTTAATAGCACCTGCCCTGCTTTCAGCCATGCTGTGA ATCCTGCTGAATGGAATTGCATGAAGTGCCTCAAGGCTTCACCAAAATGTGGTTTTTGTGCATCTGCATCTGACAAGGTA AGAAGTTTGTCATCTTCGCATCTATATTTTTATACAATTAATATATCGCGGATCAATTTTTTTTGTCTCACCAATAAAAT TTTACTCGGGTATGTTTGTAGTCACCCCAGTCCCCACCCTTGTTTTTTAAGTGACATGTCAAATTTTCGCTGAAATTCAA CAGTAGATCAGGTTTCCCTGCTCTTGAATTTCTTTAAATTCATTGTAGTCAGGGCTCAACAATCGTGAGTGATCATGATC AAACGGCTATAGAGATTTGACTGTAGCGAATTTAGCGGAATTCGACCGCAGGAAATTCAAATCCAGAGAATATTTTCACA TATGCATTGTAATCAACATTCTCTCAAATTATGTAACACTCCTATGCTAATTTCTCACACTATTATCTTTGCAGCTTTCA CCTGGGGCATGTTTGCTCTCTGATGACAACACAAGGACTCAATGTCAAAAAGTTCACCACAGGCCTTGGTACACTCAGGG ATGCCCAAGCAAATTGGGTTTTCTTGCATTGGGTGGCCTTGCACTTTACATCATATTCTTCTCACCAGGGATGGGAACTG TTCCATGGGTTGTCAACTCTGAAATCTATCCTTTAAGGTACCGCGGAATCTGCGGCGGGATTGCTTCAACAACAGTTTGG GTTTCAAATCTGGTTGTTTCCCAGTCCTTCTTGTCCCTGACACAAACCATTGGAACTGCATGGACATTCATGATGTTTGG AATTATTGCTATTATTGGCATTTTCTTTGTGCTCATTTTCGTGCCGGAAACCAAGGGAGTTCCAATGGAGGAAGTTGAGA GTATGCTCAATAAAAGAGCTGTGCATTTGAAGTTTTGGGAAAAGACAAGTGGTGGGGAGAAGAATTGACTCAGTTTGAGG CCATTTATATTGGTTTTCAAGTTTGTTAGTGAAGAACTTTCTAGTCTAGAAAACTATGAATCCTTGTTGATGATTTATGA TATTTTATCTCTAAGATTTGCAGACTTCATATTAGTTTTCATTATGTTTTGACTGGATTGCTTTCTTGAAATCCTTATGA AATCTCCGAAGCTTGAACATTATGGATTAAATTTTAAAATAATTATTTGCATATAAAATATTGATAAGTATTTAGTCATA ATCTTGTGCTTTAGTATTTTTTTTCTTCAATGTGG
CDS sequence (LotjaGi4g1v0361200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCGAAGCCGAGATTCAAGCTCTGGAGGAGTCAGTTGCCTTGGAAAAGAAGGAATCAGAAGGCGAAAAGGTCACCCT GATGACACTGCTGAAAACCAAATCTGTGAGGAGAGGTTTGTATGCAGGAGTGGGCCTCCAATTCTTCCAGCAGTTTGTGG GGATCAACACTGTCATGTACTACAGCCCGACCATTGTTCAGTTAGCTGGTTACGCGTCGAATCGGACAGCCCTGCTTCTA TCTCTGATCACTTCTGGGCTGAATGCATTTGGTTCAATTCTGAGCATTTTCTTCATTGACAGAACTGGGAGGAAGAAACT TGCTTTGATCAGTTTGTGTGGTGTTGTTTTTTCCCTGGTCCTAATCACTTGGTCATTCAGATTGACTGAAACTCATTCCC CAATGATCAGTGCAGTGGAAACCTCTAGCTTTAATAGCACCTGCCCTGCTTTCAGCCATGCTGTGAATCCTGCTGAATGG AATTGCATGAAGTGCCTCAAGGCTTCACCAAAATGTGGTTTTTGTGCATCTGCATCTGACAAGCTTTCACCTGGGGCATG TTTGCTCTCTGATGACAACACAAGGACTCAATGTCAAAAAGTTCACCACAGGCCTTGGTACACTCAGGGATGCCCAAGCA AATTGGGTTTTCTTGCATTGGGTGGCCTTGCACTTTACATCATATTCTTCTCACCAGGGATGGGAACTGTTCCATGGGTT GTCAACTCTGAAATCTATCCTTTAAGGTACCGCGGAATCTGCGGCGGGATTGCTTCAACAACAGTTTGGGTTTCAAATCT GGTTGTTTCCCAGTCCTTCTTGTCCCTGACACAAACCATTGGAACTGCATGGACATTCATGATGTTTGGAATTATTGCTA TTATTGGCATTTTCTTTGTGCTCATTTTCGTGCCGGAAACCAAGGGAGTTCCAATGGAGGAAGTTGAGAGTATGCTCAAT AAAAGAGCTGTGCATTTGAAGTTTTGGGAAAAGACAAGTGGTGGGGAGAAGAATTGA
Protein sequence (LotjaGi4g1v0361200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEAEIQALEESVALEKKESEGEKVTLMTLLKTKSVRRGLYAGVGLQFFQQFVGINTVMYYSPTIVQLAGYASNRTALLL SLITSGLNAFGSILSIFFIDRTGRKKLALISLCGVVFSLVLITWSFRLTETHSPMISAVETSSFNSTCPAFSHAVNPAEW NCMKCLKASPKCGFCASASDKLSPGACLLSDDNTRTQCQKVHHRPWYTQGCPSKLGFLALGGLALYIIFFSPGMGTVPWV VNSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLSLTQTIGTAWTFMMFGIIAIIGIFFVLIFVPETKGVPMEEVESMLN KRAVHLKFWEKTSGGEKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | - | – | |
| ProSiteProfiles | 1 | 308 | 308 | 17.205 | ||
| Gene3D | 1 | 163 | 163 | 1.1E-31 | – | |
| PANTHER | 2 | 329 | 328 | 1.3E-143 | – | |
| PANTHER | 2 | 329 | 328 | 1.3E-143 | – | |
| SUPERFAMILY | 3 | 316 | 314 | 5.23E-28 | ||
| Pfam | 6 | 139 | 134 | 3.6E-25 | ||
| CDD | 34 | 306 | 273 | 1.3474E-68 | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 40 | 62 | 23 | - | – | |
| PRINTS | 50 | 60 | 11 | 3.4E-9 | ||
| Phobius | 63 | 76 | 14 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 77 | 100 | 24 | - | – | |
| Phobius | 101 | 106 | 6 | - | – | |
| Phobius | 107 | 126 | 20 | - | – | |
| TMHMM | 107 | 126 | 20 | - | – | |
| Phobius | 127 | 214 | 88 | - | – | |
| Gene3D | 197 | 324 | 128 | 2.0E-29 | – | |
| Pfam | 215 | 318 | 104 | 5.0E-26 | ||
| Phobius | 215 | 241 | 27 | - | – | |
| TMHMM | 219 | 241 | 23 | - | – | |
| PRINTS | 220 | 241 | 22 | 3.4E-9 | ||
| Phobius | 242 | 252 | 11 | - | – | |
| PRINTS | 243 | 255 | 13 | 3.4E-9 | ||
| TMHMM | 248 | 270 | 23 | - | – | |
| Phobius | 253 | 274 | 22 | - | – | |
| Phobius | 275 | 279 | 5 | - | – | |
| Phobius | 280 | 304 | 25 | - | – | |
| TMHMM | 280 | 302 | 23 | - | – | |
| Phobius | 305 | 338 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0361200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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