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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0361300 |
| Transcript ID | LotjaGi4g1v0361300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT1G30220.1 inositol transporter 2; Swiss-Prot: sp|Q9C757|INT2_ARATH Probable inositol transporter 2; TrEMBL-Plants: tr|A0A151RF36|A0A151RF36_CAJCA Putative inositol transporter 2; Found in the gene: LotjaGi4g1v0361300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74010182..74015472) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAATTTAACTAGACGATGCAATCGTCGTTATCATCGCCACGCAGCTAGTAATATGGCACCATTCCCCCTCTATAAAC GCAGCTCAAATCACTCCCTCTCTGTTACCCCTGCCTGACACTCACAGACATCATCACCACTTAATTAGTTCTTCTATACA TTTTTCAGCCAACTTTGATTTGATAATTTCAATTCCTCTTCATATTATTTTCTATTTTAATTGTGTTCGATTGAGAAAGC AATAAACATTTATAGTTTAGAGTTTTGATTGAAGTGAAGTAAAAGAAGATGGAAGGAGGAGTGGTGGAAGCTGATGTGTC TGCTTTCAGAGAATGCTTGTCTCTTTCATGGAAAAATCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGTGGCT TTCTCTTTGGCTATGACACTGGTATGTTAATACATTTCTAATCTCTTTTTCTTTTTTCTTTTTTTTCTATTTTTGGGTCA CGCACTGATCAAATTAGGATGCTGTACATGTATACAGGAGTTATATCTGGAGCCCTCTTGCACATCAGAGATGATTTCAA AGCTGTGGATAGAAAGACTTGGTTGCAGGTATTGGATTATTGTGCTCTCTTCATCTCCAAGATTATTGCTAACCAAACAA TTTGTCACTGGAAAAATTATATATGTTCACAAATCGGTTCCACTTAGATCATATAAGAAGAGAATAGAGATGAATGTGTA ATATGAAGAAGAATTAAATAAAAATGAGATGAAATAAAAAGTGAGGTGTAAATTTATAAAAATTTGTTTATCTCCTTTGT ACATATCTCTTCATTCTAGAGAATCGTATTTTTTTTTAAACATAAATTCCTGATTGTCACAAGATTAATTCATCATGACT AATAAGTTTTTCTACAAATCTATGAGTTCAGAATTAAATTTAAACAAAACGAAGTGATGAATCAGGCCACTACGTTAATC CATTAGAGGGTGCCCTTATTGGTCATTATTTTTTGTTAAGGCGTCAACTTGTACATAAAAAATAGGGCGGTTACGAGACA AATATATAAATAAATAAATTAAACTTCTTGCATGGTTTGTTTTTTTGTCAATAATTGTTTTTTTTGTTTTCATGCAAACT CTTCGCACATCTTTGGTGAGAAGTATGTTTCAGGCAAAATAAAAATAAGTCAAGTATTGTGTGGAGCTGTCACCCAGTCA CATACTCACATATATGTATAGTGTATTTGGAATAAATTAAAATTTGCAAAATTGAGTTTATAAAATTGATTTCACACCAT TCTTAATTAATGTAATTTCTTTTACCATAAAAAAGTGGATATTGCTTCCTGCAAAATGTATTCACTATCTTTGGATTTTT TATCTTTTATTTTACATTTGGAAAAATACACTATCTTTGGATTTTAAAATATAGAATGCTATTTCTATCTTTAACAGAAG TTTTTCTTTACATGGTTTAAGCTTTAAGATTTAGGATTCATTGATTTACCTTGCACAATTTTACAAAATCTACAAAATCC TTTGAGGATCGAATTAAGGACAATTTTTTAATTTAATAGCAGCCAGTAGATATGGGTCATGACCGCAGCAATGTGATATT GTAGTTTCACGAAATTTTTGTGTCAATTTTCATGATCACTCATGCTATAGCATTTAACATGCAACAAAATTGTGCTAAAC AGGATGAGTAAGCTTATATTTGGATAGTGTAAGTATTAGTGCAAATACAGTTAGCACTTTGAGCTAAAAAAAGTGAATGA AACTATTTTTATGAATTGTATTTGAAGTTTAACGTTGCTCTCAATTGATAACCAAACAAACTAAATATAATTCCTTCTAC CAATTGTTTCATTCTTGTTTTTCTTCTTCTTTCTGTAAGAAACAGAGTATTTAATCATGCACTTGTTTTAACTTTGCAAC ACATAAGTATCACACTATCACCTGCAATATTTTAGTAACAGAATCAAGAACATTCAAACTGGCTTGTGAAGTGCACCATA AAAATTTAGACTAAAAAGCAATGGTGTTCATCATAATGCAGGAAGCAATAGTGAGCATGGCCCTTGCTGGAGCAATCATA GGTGCTTCAGTTGGTGGATGGGTCAACGACCGATTCGGAAGGAAAAAAGCAATCCTATTTGCAGACGCCCTCTTCTTCGC TGGGTCTGTGATCATGGCTGCTGCTACAAACCCATCCATTCTCATCGTCGGTCGAGTTTTTGTTGGCCTTGGTGTTGGAA TGGCCTCCATGGCAGCCCCATTGTACATCTCTGAAGCTTCTCCGACGAGGGTTCGAGGAGCCCTCGTTAGTCTCAATGGA TTTCTCATCACTGGAGGACAATTCCTCTCCTATCTCATCAACTTGGCCTTCACAAAAGTGAGAAACTTCAACTTTCAGCA TGTTTTCTTAGACTATTTTGCTGATGTTGTGACTTGTGGGGTATGAAGTATTTTGAACTTTCTTAGAATGTTTTGATAAA CACATTGAAATTGTTCTGTCCAAATACCTAGGGTCAGACTCCGCGATTAAGACACTAATTAAGCCTAGTTCTCAGGATGA TCCGGTGATGAGTGAACATATCTGCTTCTGTTTCATTCTCCCTTCTTATATGTAGGTCTTAGATTTGTCCTTTAGGTTGC TAGTAGTAATTTAGCCGTTTCATGAATAGTTGATTTAATTTGGGTGTTACGATTCCCCTAACTCATGGTTATCCAATATC CATTAGCTGGATCATAACTAATCCTCTAGGCTATGCTATCATAGGCGATAGCTCGGTAGGTACACAATCCTCCAAGTCCT AAGCATTTTGCTTAGTGGATTCCTAGTGCATATTAATTTGGAAATCTTTCTACAATTGATTTTAAAGTCAAAATCAAGAA ACTTCTGTGAGTATAGATTCTGGGTACCATAATTGATTCGAGAAAAAAATAAGCTGATTCAGACTTACTATCATTCAAAT TCAGGGGATGGTTACACTTTTAATTACATTATCTAGAGTGTTGGTCCAATATACTAGTGTTTTAAACTTTGGTTGTTTGA TAATCAATTCAGGCACCAGGAACATGGAGGTGGATGTTAGGAGTAGCAGCAGTACCAGCTGTGTTACAAATCATACTGAT GATCATGCTACCAGAATCACCACGTTGGCTGTTCAGAAAGGTTCTAGCTTCTATCATAAATTCATTGTTTTGAATAGTTT TTTTCCTTTTCTTATTAAGAGATTGTATGTTTACTTGCTTTTGTTTTTTGACTTTAAATGGAATAACAGGGAAGAGAAGA AGAAGGTAAAGCAATTATAAGGAAGATTTACCCGCCCCAGGAAGCCGAAGCCGAAGCCGAAATTGTCACTTTGAAGGAAT CAGTAGAACTTGAAATCAAGGAAGCAGAAGTTTCTGATAAAATCAGCATAATCAAAATGCTGAAGACTACAACTGTGAGA AGAGGTTTATACGCCGGAATGGGGCTTCAAATTTTCCAGCAGTTTGTGGGGATCAACACTGTCATGTACTACAGCCCTGC CATTGTTCAGTTAGCCGGTTTTGCGTCCAATCGAACTGCGCTTCTTCTGTCACTCTTCACGGCCGGGCTAAATGCGTTTG GCTCTATTTTGAGCATATACTTCATAGACAAGACAGGGAGGAAGAAGCTTCTGCTGTTCAGTTTGTCTGGGGTTGTTTTG GCTTTGGTTGTTTTAACTGTTGTGTTCCATCAGAGCACAAGTCACTCTCCAATGGTTAGTGCATTTGAAACCTCTCAGTT CAATAATACTTGTCCAGATTACAGTTCAGCTGTGAACCCTGGTGGATGGGATTGCATGAAATGCTTGAAGGCTTCTCCAG ATTGTGGCTTTTGTGCTAATGGAGCTAACAAGGTAAACTTGTTCTCTTCCCTTCCTGATTGAGTATTCCAAATGATTTCA ATAGTTCATCATTTCCCATACTTGATATATCTTACTTCAAATCTATAGTTAGCAGCATAGTTATCACTTTTCAGCAATAT GATATCATTATCAACTCATAGGATGGGAAAATCGTGTAGTAAATAAATAAGCAAATTACTGAAATTAGTCTTGAAGTTAT TCTCTTCTTGCAGCTTAATGCATGTTTGTTCTATAATTGATTCTAAAGGCAGAATCAATTCTAGGGAGAAGTGCGTGTTA ACGTGCGTGTTAGCATGTCATATGTCTCCAAGATTAAGGAATTTTAGGGACTAAGTTGCTAATTTAGACAAAAACTGCCA TAATCTTTATTATATCTCTAACATAGCACCAATTATATGCAGCTTCTACCTGGGGCTTGTTTGATCTCCAATGACAGCAC AAAGGACCAATGCCATAAAGAACACAGGCTATGGTACACAAGAGGATGTCCTAGTAAATCTGGATGGCTTGCAATAATAG GCCTTGCACTCTACATCATATTCTTCTCACCCGGGATGGGAACCGTGCCCTGGGTTGTCAACTCTGAGATTTACCCTCTA AGGTATCGAGGAATCTGCGGAGGAATGGCGTCTACATCAAATTGGGTCTCGAATCTCATCGTTTCTCAGTCATTTCTATC CTTGACACAAGCGATTGGGACGTCAAATACATTCATGATATTCATATTCATCACTGTTGCTGCCATTGTCTTTGTGATTA TTTTTGTGCCGGAGACGAAAGGGCTTCCCATGGAAGAGGTGGAGAGGATGCTAGAAGGGAGAACTCTTAACTTCAAGTTT TGGCAGAAAAATTCTAAATCTGGAAAAGAAGTGTTGAAACAAAAGACTCAGTCAACTTAAGTTAATTGTGCTGTGTATAA TCACCTATAATCAATAATGTGTGTGTATGTAGGTTCAGAAAGAAAGCAGTAATAAAATAGTGTAATGTAGACTAGCAATG TAGATTTGATAAAAGTTCATCTTCTGTCAATGAAAAAAGGGTTTTATGTGTATATGATTTGGTCTGAAGAATTATTATTT GGAAAGAAGAAACCCAAAATAGTTGGCTGACAAATCATTTGTGACAAAACCTTGTTTTTGCGAGAGTTTTTAACAGTCAC AAATGCTATGGAGGTAAAAACTCCTACAGATACATATGTCAGCCGCATAGCAATGTTTATCACATTTATTATTTCTCTCT ACTGTTATATTCTCTCTCCGGTGTCTATACAATAGAGTGGTCTATGAGTCATTTTTGTAAACTTTTTAGAATCCATGTGC AGCTGCTGCTGCTCTAGTTGTATGGCCAGACATGACAATTCTTGTTATCAATGGAAGCCAATGTCAAGAGGACCGGTAGA ATGTATCTTAG
CDS sequence (LotjaGi4g1v0361300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGAGGAGTGGTGGAAGCTGATGTGTCTGCTTTCAGAGAATGCTTGTCTCTTTCATGGAAAAATCCTTATGTTCT TCGCCTTGCTTTCTCTGCTGGAATTGGTGGCTTTCTCTTTGGCTATGACACTGGAGTTATATCTGGAGCCCTCTTGCACA TCAGAGATGATTTCAAAGCTGTGGATAGAAAGACTTGGTTGCAGGAAGCAATAGTGAGCATGGCCCTTGCTGGAGCAATC ATAGGTGCTTCAGTTGGTGGATGGGTCAACGACCGATTCGGAAGGAAAAAAGCAATCCTATTTGCAGACGCCCTCTTCTT CGCTGGGTCTGTGATCATGGCTGCTGCTACAAACCCATCCATTCTCATCGTCGGTCGAGTTTTTGTTGGCCTTGGTGTTG GAATGGCCTCCATGGCAGCCCCATTGTACATCTCTGAAGCTTCTCCGACGAGGGTTCGAGGAGCCCTCGTTAGTCTCAAT GGATTTCTCATCACTGGAGGACAATTCCTCTCCTATCTCATCAACTTGGCCTTCACAAAAGCACCAGGAACATGGAGGTG GATGTTAGGAGTAGCAGCAGTACCAGCTGTGTTACAAATCATACTGATGATCATGCTACCAGAATCACCACGTTGGCTGT TCAGAAAGGGAAGAGAAGAAGAAGGTAAAGCAATTATAAGGAAGATTTACCCGCCCCAGGAAGCCGAAGCCGAAGCCGAA ATTGTCACTTTGAAGGAATCAGTAGAACTTGAAATCAAGGAAGCAGAAGTTTCTGATAAAATCAGCATAATCAAAATGCT GAAGACTACAACTGTGAGAAGAGGTTTATACGCCGGAATGGGGCTTCAAATTTTCCAGCAGTTTGTGGGGATCAACACTG TCATGTACTACAGCCCTGCCATTGTTCAGTTAGCCGGTTTTGCGTCCAATCGAACTGCGCTTCTTCTGTCACTCTTCACG GCCGGGCTAAATGCGTTTGGCTCTATTTTGAGCATATACTTCATAGACAAGACAGGGAGGAAGAAGCTTCTGCTGTTCAG TTTGTCTGGGGTTGTTTTGGCTTTGGTTGTTTTAACTGTTGTGTTCCATCAGAGCACAAGTCACTCTCCAATGGTTAGTG CATTTGAAACCTCTCAGTTCAATAATACTTGTCCAGATTACAGTTCAGCTGTGAACCCTGGTGGATGGGATTGCATGAAA TGCTTGAAGGCTTCTCCAGATTGTGGCTTTTGTGCTAATGGAGCTAACAAGCTTCTACCTGGGGCTTGTTTGATCTCCAA TGACAGCACAAAGGACCAATGCCATAAAGAACACAGGCTATGGTACACAAGAGGATGTCCTAGTAAATCTGGATGGCTTG CAATAATAGGCCTTGCACTCTACATCATATTCTTCTCACCCGGGATGGGAACCGTGCCCTGGGTTGTCAACTCTGAGATT TACCCTCTAAGGTATCGAGGAATCTGCGGAGGAATGGCGTCTACATCAAATTGGGTCTCGAATCTCATCGTTTCTCAGTC ATTTCTATCCTTGACACAAGCGATTGGGACGTCAAATACATTCATGATATTCATATTCATCACTGTTGCTGCCATTGTCT TTGTGATTATTTTTGTGCCGGAGACGAAAGGGCTTCCCATGGAAGAGGTGGAGAGGATGCTAGAAGGGAGAACTCTTAAC TTCAAGTTTTGGCAGAAAAATTCTAAATCTGGAAAAGAAGTGTTGAAACAAAAGACTCAGTCAACTTAA
Protein sequence (LotjaGi4g1v0361300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGGVVEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLHIRDDFKAVDRKTWLQEAIVSMALAGAI IGASVGGWVNDRFGRKKAILFADALFFAGSVIMAAATNPSILIVGRVFVGLGVGMASMAAPLYISEASPTRVRGALVSLN GFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAVPAVLQIILMIMLPESPRWLFRKGREEEGKAIIRKIYPPQEAEAEAE IVTLKESVELEIKEAEVSDKISIIKMLKTTTVRRGLYAGMGLQIFQQFVGINTVMYYSPAIVQLAGFASNRTALLLSLFT AGLNAFGSILSIYFIDKTGRKKLLLFSLSGVVLALVVLTVVFHQSTSHSPMVSAFETSQFNNTCPDYSSAVNPGGWDCMK CLKASPDCGFCANGANKLLPGACLISNDSTKDQCHKEHRLWYTRGCPSKSGWLAIIGLALYIIFFSPGMGTVPWVVNSEI YPLRYRGICGGMASTSNWVSNLIVSQSFLSLTQAIGTSNTFMIFIFITVAAIVFVIIFVPETKGLPMEEVERMLEGRTLN FKFWQKNSKSGKEVLKQKTQST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 5 | 564 | 560 | 5.7E-278 | – | |
| PANTHER | 5 | 564 | 560 | 5.7E-278 | – | |
| Gene3D | 18 | 393 | 376 | 2.0E-97 | – | |
| SUPERFAMILY | 19 | 551 | 533 | 7.06E-71 | ||
| TIGRFAM | 20 | 368 | 349 | 1.9E-91 | ||
| Phobius | 29 | 54 | 26 | - | – | |
| ProSiteProfiles | 29 | 543 | 515 | 56.232 | ||
| Pfam | 30 | 368 | 339 | 6.5E-92 | ||
| TMHMM | 30 | 52 | 23 | - | – | |
| CDD | 32 | 541 | 510 | 3.38194E-171 | – | |
| PRINTS | 37 | 47 | 11 | 2.5E-27 | ||
| Phobius | 55 | 65 | 11 | - | – | |
| Phobius | 66 | 86 | 21 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 87 | 97 | 11 | - | – | |
| Phobius | 98 | 117 | 20 | - | – | |
| TMHMM | 98 | 117 | 20 | - | – | |
| Phobius | 118 | 122 | 5 | - | – | |
| TMHMM | 122 | 144 | 23 | - | – | |
| PRINTS | 123 | 142 | 20 | 2.5E-27 | ||
| Phobius | 123 | 144 | 22 | - | – | |
| ProSitePatterns | 128 | 153 | 26 | - | ||
| Phobius | 145 | 155 | 11 | - | – | |
| Phobius | 156 | 178 | 23 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 179 | 183 | 5 | - | – | |
| Phobius | 184 | 206 | 23 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 207 | 274 | 68 | - | – | |
| Phobius | 275 | 298 | 24 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| PRINTS | 286 | 296 | 11 | 2.5E-27 | ||
| Phobius | 299 | 312 | 14 | - | – | |
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 313 | 336 | 24 | - | – | |
| Phobius | 337 | 342 | 6 | - | – | |
| Phobius | 343 | 362 | 20 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 363 | 450 | 88 | - | – | |
| Gene3D | 419 | 558 | 140 | 3.6E-32 | – | |
| Pfam | 447 | 553 | 107 | 2.8E-26 | ||
| Phobius | 451 | 476 | 26 | - | – | |
| TMHMM | 454 | 476 | 23 | - | – | |
| PRINTS | 455 | 476 | 22 | 2.5E-27 | ||
| Phobius | 477 | 487 | 11 | - | – | |
| PRINTS | 478 | 490 | 13 | 2.5E-27 | ||
| Phobius | 488 | 509 | 22 | - | – | |
| Phobius | 510 | 520 | 11 | - | – | |
| TMHMM | 515 | 537 | 23 | - | – | |
| Phobius | 521 | 539 | 19 | - | – | |
| Phobius | 540 | 582 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0361300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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