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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0363000 |
| Transcript ID | LotjaGi4g1v0363000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G68170.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|F4HVM3|WTR10_ARATH WAT1-related protein At1g68170; TrEMBL-Plants: tr|I3SXQ5|I3SXQ5_LOTJA WAT1-related protein; Found in the gene: LotjaGi4g1v0363000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74194735..74199019) extracted from Lotus japonicus Gifu genome v1.2.
TTGTAGCACCAAGTACGATAACAGTGAAGGAGTGATGGGGCACTTTTTGGCATGCAAATGTAGTTCCCCGGCCCTCTCCT ATAAATACCCCTTTTGTGATGAGCTATAATTCCACAACCTCATCTTAAATAAATAGAGATTATTAGCTTCTCTCTCACTC TCTCTAGCTATTTCCTTTAATAATCTCAAAACTCCCTTGTAGCTAACACCATGATGAGCGGGGAATCCAATTTATACAAA GGACTGAAACCAGTGATACTAATGGTGTTTGTGCAGGTTGCATATGCTGCAGTGAATATCATCTACAAGCTCGCCATAAA GGATGGAATGAACATGCCGGTGGCTAATGCCTACCGCCTCATTTTTGCATCGGCTGTCACTATCCCTCTTGCTTTTATCT TTGATAGGTTGATGATGACTCCATGCATTTTTTTATTGCTTTTACACTCACTAGTCACTACTCACTAATCGGACTATAGT TTGGGAAATATTTAATTTTCATGCATGAACCTTATATGAAAACGTTAAGTTAGATTATTATATTCTTGGAGAGTGTGGTT ATAGTGAAGTGAACTATACATGAGATTATCTTCAATATTCCCTTTTAATTTCTCTCAATTTTGCACACTGAGTGTAGTTC TCCTAAGATAAGTCAATTACTTAAATTCAAATAGATTAAAAAAAACAAAAAGAGAAAGAGAGAAAGAACGAATGTGAAAG TGGAAATAATATAAGAATGTAAATGCATCATAGCTCCTATATAAGTGATATATCAATCGGATAACTGTCAAAATTGTATT TTTGCACTGTACACATAACATTTTCGTTAATACATGCATATAATTAATTTTTTTTATAAGCACATGCATATATATAATTA ATAATTGTTTGCTGTATCCTATATATAGGAAGAGAAATATTCTACAGCTTCTGAATATGAGATTCACGAGAGGAAAATGG TTTTTCCCTTTTTTTTTCTCAATACAGGAAGAAGAGGCCAAAAATTACATGGAGGGTACTTTTTTTGGCATTTCTTTGTG GATTGTTTGGGTATGCTACGTAAATTATTGACTTTACCTCCATGAGTATATGGTATCCATGTTAAGGTTTTTTTTTATAA ACAAAGAAATATATTGAATGAAGTATAAGGGGTACTTCAACACAATATAAAGAAGAATAGTGAGAAAGAAGAAAAATAAT TATAAGGTAATGAATTACAAATACTCATATATATGGTACAGTTATGTAATGTTTCTATTTCAGGGGAAGTTTATTTCTAA ACCTTTATGCCGTGGGTCTGGCTTTGACGTCAGCAACGTTTATGTTGGCCATGGTCAACCTTATTATAGGCATTACCTTC ATCATGGCTACAACCTTCCGGTATGTACACTTATCTTGCAATTTTAGGAAGGTTACCTTCTTCATATATGATATGAAAGA TATTAATTGTATGGTTTTGATTTTTTTTAACTTAAAAAGAGAAATACGGTGTAATTTAGGAAAGTTAATAATTTCTTTTA TAAATTTATTGTTAGTAACTATTTTTTTTTAATCATAGAAAATTAGATAAAAGTAACTTAAGACGAGATAATTAATGATA AAAGACCGGGTTAGCACTCACCGCACATTAGGTCAATATTAAATGATAGTGGTTTACCCTCTCAACTTATAATGCTTTTA ATTAATTATAAATAAAACTCACATTAATCAGTGTCCATTTTGTTGTATATGCGTTTGATTTTCTGTAGATTGGAAAAATT AAATTTCGGAGTACCAGAAGGGAAGGCAAAGGTGATAGGAACATGCGTTGGAATTAGTGGGGCAATGCTCATGACCTTTC TCAAAGGGGTGGAAATTAATATTTTTCCTTCCCAAATTAACCTTTTGCATCCACATCGGGACCAAAATAAGCATATGGGG CAACATCATGTAGACTTTAGTAATAAACTACTTGGGGTTCCAAGTGCCATTGCAAGTTGCTGCTCTTTTTCTTTGTGGTT AATCATTCAGGTTAACTGATTTTTTTTTTTTCACTATAGTCATTTCATATATCAATATTTTTTATGTGAATGAGTTGTTT GAGTTGTGTTCGCTTCTATTGTCATCTATGGGCACAGGCTCAAGTGAACAAAGAATTCCCCAGCCATCACTCAAGCTCAG CGTTGATGTGCACAATGGGAGCGATACAATCCATTGTTGTTGCTCTTTGTTTTGAAAGGGATTGGAATCAATGGAAGTTG GGTTACGATATCAGACTTCTAACTGTGGCTTATTCGGTATGGTTTATTTTGACACTACGTACAAGTTTTTGAGATGTGAG CAAATTCTCAAGTAAATAAATTAATAAAAAAAAGCACTGTATAGGTTCAAGCATATGAAAACTCACGAATTATATTTGTA CCAGCAATTTGATGGTATTGAACACAAGGATAGAAAAATAATGGGCAAGTAATGTTGATTTTGTGGCATAGTTATATTTT GTTGATTTTTTAAAATTCTATATTATGTTAGTAATACAATCCATGTACCTGATTCTGGAGTTTAATGGTCTCTCTCATTG TAACATATATATAGGCTATAGCATCACTCTTTGTTTAAATGAGTAATTTTCATGCAGGGAATTGTGGCCTCTGGTTTGGT AGTCATTATGATTTCCTATTGCGTAAAGATGAGAGGGCCTCTATTTGCATCTATTTTCAATCCTCTACAACTTTTACTTG TCGCTATCGCTGCTTATTTGTTGTTGGATGAGAAGTTATATCTAGGAAGGTATAGTCTATATAAATCTTTCTTCATGTTC ATGGTTTGATATACTATATATGATGATTTAGTATGGTTTTAATTAATTATGCAGTGTTCTTGGAGCTGGGCTGATCGTGT GTGGCCTATACACTGTGCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGACTCAGTTAATTCCATTGGAAAACACCAAA CAGCCCGAAGTTACTGAGATTGCTGTTATGTCTATGACCATAGATCATGATAAATGGGTCCATAGCAATCAAAATCAAAC TAGTGCAACCTGGAATGTTGCTAATGATCAATAACTATTTGTCGAAAATAAAAAAAATGGAACACGTCACTACTGAAATA TGTCGCAACCAAGGTCGCGAAGATGTAACTTTTTTTAATGAAAACAGTGGAGTCACTTTAAATAGGAAACATTTGAAAAT GTGATAAGAATATGAGATCTGTGACACTAAATTTGGGTTATGGAGTTGATTGCGCGTATAAGATGTATTAGCAACCTACA AGGCTACAACGACTGGTTATTGAAACTATAATTAGTTTGAAGTTGGTTTAACTTGAACATAAATAAACTGGACCCGATTG AAGAGAGAAAAGCCGAGGAACTTACGATACATTGGTTGCTCTAAGTAATATAAGTCTCTCCACTGTTGGAATAAACAAGA ACTGGTTTACTTGTTTCCTGCTATTTGAAAATTTATGGAAGTGCATCAGCTTTATAACTACCAATTGACAAAGAATTGAA GGCAACATATGAACCTTGCAAGGAGCAGTTCTTGCCTGAGTACAGTGCTTACTCACCAAAGTAACTAAAGAAGTGTATGA GTGATTTACAAGTTATTCAAATTGACAGAACAAATTAGCACATTCTGATAGTATAGAGCATGCAGTTTTATAAAAAATTC ACACCTTTGTAATGCATGAAATCAATCCTTGAACAAATCTAGGAGCAGTGCAGTTTACTCCAACTACAACCACTTGTCTG CATGAATCCACTATCAAAGCACATTCTAAGATAGAATCACTATTAGCAACATTTCTTTAGTCCTTATGACTAAAAGAAAA TCACGCAGGAATGTCTATGCTCTCTTCCTCGAGAAGTTTAGCAAAAGCATGTATTTAATTGTAAGCAAAATCAATAAGGT TGCAGTGAATAGTTCTCAACTTTCTATGGTATTAGCAAATGATAGTATTTCAATAAGATGTAGGGTCATTGGCATTAAAC TTTATGAGCAAAATTTGATCCATAGATTACATTATTCTAAATACCAAAAAATCTCAAGCTTCAAAGAACAATGAGATGTT AAAAAAGGAGCAAAACAAACCGCAAATGCTAGATTAATTTTGTTACAACTAACATTTCTTACTTGTAATTAAGGCTTTCT CTGCCTCCCTCTCAATCCGAATAATTCCATGATCTGATGTTGCATTACAGGATAACACAATAGGCTTAAATCTTCCATCA ATAGGAATAGCAGTCCTCACTTCAGGAGGAAATCTCCGTCGTCTG
CDS sequence (LotjaGi4g1v0363000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGCCATGGTCAACCTTATTATAGGCATTACCTTCATCATGGCTACAACCTTCCGATTGGAAAAATTAAATTTCGG AGTACCAGAAGGGAAGGCAAAGGTGATAGGAACATGCGTTGGAATTAGTGGGGCAATGCTCATGACCTTTCTCAAAGGGG TGGAAATTAATATTTTTCCTTCCCAAATTAACCTTTTGCATCCACATCGGGACCAAAATAAGCATATGGGGCAACATCAT GTAGACTTTAGTAATAAACTACTTGGGGTTCCAAGTGCCATTGCAAGTTGCTGCTCTTTTTCTTTGTGGTTAATCATTCA GGCTCAAGTGAACAAAGAATTCCCCAGCCATCACTCAAGCTCAGCGTTGATGTGCACAATGGGAGCGATACAATCCATTG TTGTTGCTCTTTGTTTTGAAAGGGATTGGAATCAATGGAAGTTGGGTTACGATATCAGACTTCTAACTGTGGCTTATTCG GGAATTGTGGCCTCTGGTTTGGTAGTCATTATGATTTCCTATTGCGTAAAGATGAGAGGGCCTCTATTTGCATCTATTTT CAATCCTCTACAACTTTTACTTGTCGCTATCGCTGCTTATTTGTTGTTGGATGAGAAGTTATATCTAGGAAGTGTTCTTG GAGCTGGGCTGATCGTGTGTGGCCTATACACTGTGCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGACTCAGTTAATT CCATTGGAAAACACCAAACAGCCCGAAGTTACTGAGATTGCTGTTATGTCTATGACCATAGATCATGATAAATGGGTCCA TAGCAATCAAAATCAAACTAGTGCAACCTGGAATGTTGCTAATGATCAATAA
Protein sequence (LotjaGi4g1v0363000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLAMVNLIIGITFIMATTFRLEKLNFGVPEGKAKVIGTCVGISGAMLMTFLKGVEINIFPSQINLLHPHRDQNKHMGQHH VDFSNKLLGVPSAIASCCSFSLWLIIQAQVNKEFPSHHSSSALMCTMGAIQSIVVALCFERDWNQWKLGYDIRLLTVAYS GIVASGLVVIMISYCVKMRGPLFASIFNPLQLLLVAIAAYLLLDEKLYLGSVLGAGLIVCGLYTVLWGKSKEMKKKTQLI PLENTKQPEVTEIAVMSMTIDHDKWVHSNQNQTSATWNVANDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 249 | 249 | 2.2E-128 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 249 | 249 | 2.2E-128 | – | |
| TMHMM | 2 | 19 | 18 | - | – | |
| Phobius | 6 | 21 | 16 | - | – | |
| Phobius | 22 | 32 | 11 | - | – | |
| Phobius | 33 | 51 | 19 | - | – | |
| Phobius | 52 | 86 | 35 | - | – | |
| TMHMM | 87 | 106 | 20 | - | – | |
| Phobius | 87 | 106 | 20 | - | – | |
| Pfam | 88 | 226 | 139 | 8.6E-14 | ||
| Phobius | 107 | 117 | 11 | - | – | |
| Phobius | 118 | 137 | 20 | - | – | |
| TMHMM | 119 | 139 | 21 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| SUPERFAMILY | 145 | 231 | 87 | 2.88E-12 | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 157 | 176 | 20 | - | – | |
| Phobius | 177 | 182 | 6 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 183 | 202 | 20 | - | – | |
| Phobius | 203 | 207 | 5 | - | – | |
| TMHMM | 208 | 227 | 20 | - | – | |
| Phobius | 208 | 228 | 21 | - | – | |
| Phobius | 229 | 283 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0363000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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