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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0372300 |
| Transcript ID | LotjaGi4g1v0372300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT1G71900.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4; TrEMBL-Plants: tr|A0A072U492|A0A072U492_MEDTR Probable magnesium transporter; Found in the gene: LotjaGi4g1v0372300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75211930..75217778) extracted from Lotus japonicus Gifu genome v1.2.
TTCTATGCATCGTGAAGAGGTGTTTTATGGAACATGGCAACATGAGGTGGTGATTAAACTAAACACAAAAAATATCATTA AATTATAATATTTTGATATGACTAATGAATCGCGCGCACAAAGCACAGCACACAACAGCACATCATCGTTCATCGTTGTA ACAACGATTTAGAAGAGAATTGCGGAACCATCACAATTTTCAGGGTTGTTGTTTTCTGGAACACAAACAAACAACGTAAG ACACCACCACCGAATTCATGTTTCACTTTTCATGCTGCTCAAACAACCATTCTTCTTCTTCTTCTTCTTCTTCGTCTTAA TCTGGTCACACCGATGGTTTTTTAGCTGCGAAAACGAGTTTCCAAGGTGCCAACAAGGTACTTTCCCTTCATTACACGTT ATCATGTTTTTGTGATTTCTGTCTCTTATTGCATTTTTCTGTGATTTTTTTTCCTATTTTGTTAATGGGGTGGTGCTTAT TTATGTGTTTTGATTTTTGAATTGATGGGTTAAGGTTGAGGCATTGGATTGGACATCTTGGAATTGCAATTGATTTGTGA AAAAGAGAATTTGGGTGAAGTTTTGATTCTTTGTCATAGATGGGGATTTCTTCTGACAACGTAACTGGGCTTGTTCTGGC GGTTTCTTCCAGCGTTTTCATTGGCTCCAGCTTCATTGTTAAGAAGATGGGGTTGAAGAAAGCTGGGAATACAGGGAAAA GTGCAGGTTTGTCTCTAATTTGGTTTTTCCTCATACCCCTCTTTTGGTTTTTGGTATTTTTTCATCTGGGTTGTTGAAAA GTTTTGAACTTGCAGTGCATTTGATTTTTGTTTGTTTAATCATTGAATCTGTTTTGCTTTGATTTGATCAGCCTCCGGAG GGCACGCGTACCTGTATGAACCGTGGTGGTGGGTTGGAATGACCTCAAGTAAGTGATTTTCAATTTTTTTCTTCTTTCTT TTTTGGTGCCCTTTACTCAATTCTGGTATATCATGTGGTATTTCTACATGAAATCCTCCTTTTGATGTGGTCTAACATGT AAGCAACCTAGTATCTTTCCTAATTGCGTGTTCTCTAGGACTTTGTCTGGGAGTTTTTAAAGGAGGGGAAGGCTTTGAGA GGAAGGGGAGGGGGGGGGGAGATGGGGAAGGGAGGGTTAGTTATCCCCTTCTAGATTTGCAACTCTAATGAAATCAGCTG AGAAGTGTCTCTTTGAAGCCTACCAATATATTGGAAAGGAAAAACAAAAAATGAGAGCACATGGAGAAATAACAAGGAGA AAGTGATACTTACTCAACTATTTACACCTATAAATGTATTTTAAATCTAAAATTAGAAATATATATTTCAAATGTTTTAA AACATGTATATTATAACTGAACCAATTAATAATTTGAAACATATTATGAACCCCAGTGGCGTATTAAGTAAGCATGCCCC ATGTTACTACACTTAACCAAGTAACATTGTGTTATCTGTACCAAAGAGTATTGCATACTAGGTACCTTTGACCCATTAGG TCTAATGTTTCTTAGATCAAAGAAAGCTATTTCTGTTACTTCCAAGTTCTTTCAAACAAAGTATGCTTTTGAATAATCAG ATGTATCTTGATTCATAACGCCAAGATCGGAATTTTTTTCTCCTTGTTGAAAATAAGAAATAAAGTGAAACAGTGTGTAT TTATAAAATTCAGAATTTGATATGCTCAACCAAGGGATTGGGACTTCAAAAATATTTCCTTTAGTTTTGGATTTAAATGT CTTTCATCAAACAGGAAAATGAGAATTTACTTTATAGCACAAGTGCACTACCACAATGTTCATCAGAATAGGCGCATACT GGCTTTAAATTAATGGAACAATCAAAGTTTAGCATATTGCAAAGTGCATCCTAGTGATTAAGTTATTTGATCCTTAGCTT ATGTTGTTTAGATGCAAGGAGGGGGCATCTCTTCCAGGATGCAATTTTTTGTTCCCGTCATAAGAAACATGGGCTTTGAT TTCTTTATAAGGATTAACATCTCTTGTACATCAGGGAAGATCAGTTATATGAGTGACTACAAGCGACTAGTAAAGTGGTT ATACTTGGTTGTGAGATATATAGATTGCTGAAGCTTTGAAAGTTCAAAACCAGGAATAATTTATCATAGACTATCTCATG AAAGAATTCAGTCAATTAAGGAGTGAGGTTTCGTTCTATATATAACACACCAATATCAGAATATTTAGATGTAGGTTTTT AGTAAGTTCTTCAGAGCGCTCAGTGTTAGAATTCTGAAAATATTTCATTCATATTAATTTACATTCTTACATGATATAAT CCATGGATACTTTAATAGTTCTGTCTTTTATGCTTGCCTTCTATATTAGTAAGTTTCCTCTATGTTCAAACCCTAAAGTA ATGATGAGGGTCACTACCCCTGTTTACACTCAGAAGCAAGAGGAAATTGGGGAAGTGTAATGATCACATTTTGAAGCCTC AATATCATGAATGAATCAGTTAGTTTTTTTGAAGTGATAATCACTGTCAGAATGTCTTGGCATATAACTTCTACCATTCT GTGACTAAAAATAATTTACTTGTTTACATTCTCAGCGATCTTAGGATTCTATCAACTGATTCTACATATGTGTTGATATT TTTGCAGTGATTGTTGGAGAAATCGCCAATTTTGCAGCTTATGCATTTGCTCCTGCACTACTTGTCACTCCTTTAGGAGC TTTAAGCATCATTTTCAGGTAAGAAACATGGCATTCTTTACAACACAAACTCTTCATTTCTTCTCTTCAATACAAATGTG AATGCACATCTTCATCCATCAAATTTTGATCTGGAGCATGCAAGAAATAGTTACAAACTCATATTTCGATGCAGTGCAGT ACTTGCTCACTTTATCTTGGAAGAGAAATTGCACATCTTTGGTGTGCTTGGATGTGCTCTCTGTGTGGTGGGATCTACCA CTATTGTTTTGCATGCTCCACATGAAAGAATTATTCACTCTGTTAAGGAAGTGTGGCAGCTTGCTACAGAACCAGGTATT TTTTTATCCTTGATTGCTTGTTTTCAACATTGTTTCCCATTGAATATTATCACAATTCAAAGCAGGAAGAAGATACACGA ATGGTTTGCATTATGGCCTTAATGAATTTGAGGCATTCATTTAAGGTTAATTAAGCTAACATTGATTTTTTTTCTCTTAA TCAACAGGTTTTCTTGTCTACACTTGTTTAGTCGTGATTCTTGTCATCGTCCTCATTTTCTACTTTGTTCCAAGATATGG ACCAACCCATCTGATCATATATGTTGGAATATGTTCTCTCACAGGCTCACTTACGGTATTAATTTTTGCTTTGTTAGAAC ATATGGAAAATATCTCATAATACTTGGATTGTAACTTTAATTTAGAATATCCAAATTTCATTACATGTTTCTTTGTTTAA TTAGGATTAGAAGTCTAATAATTATCATGATTAGTTTCCTTATTTAACATTAGGAGTATAGTATTGGTATAAATAAGGGT TAATGCTTTGTCTTTTATATAAAACCATAATCACAATTCAAGTTTTTATTCTCTCTCTTTCCTCCTTCCTTATCTAAAAC CCTATAAAATCAACATCAATTATATCTTCAATGCTCATGTGTCATGATTGAACTTAGACCTGCTCTCCATGAACTTAATG TGGATCCACGGTGCGTAGGTTATGGGTGTGAAAGCAGTGGGAATAGCTTTGAAGCTTACATTTGAAGGTTCCAATCAATT CACTTACTTCCAGACCTGGTTCTTTACGCTTGTTGTTATAGGGTGTTGTCTTCTGCAGATTAACTACTTGAACAAGGTAA GCTTTGGCATTATATATATGTTTAACTTAAAAGTAAGTTATAATTGAACGGATAGATTCACTACAGATTTCCAGTGGACT AACAGTTGAACTTCAATTCAGCATCCTCTTTGAGTTTCTTTAATAATTTAAAAACCAGTAGCACTGGTATCCTGAAATTA AGTGTATTGAATTAGAAGTTCAAGATATTAACTCTACCAGTTATTTTGTCATGCTATTTATTTAATTTGGAAACATGTTT CAGGCTCTGGACACCTTTAATACTGCGGTTGTGTCACCCGTTTACTACGTCATGTTCACATCGCTTACAATCTTTGCCAG CATAATCATGTTTAAGGTGACTAATTACATTCCGCGGTTCTTTATATTTATATTATAATTTTTTTTCATTTTTGTTTACT ATGCACTTGGTGATGCTACTAAATTATTTGGAAATATGGTAGTTTATAAAAACAACATCAGAAACCTTTTCAGACTAGGT GGGATTGGTTAAATGGATAGTTCTATAGTATATATTGTAACATGAGAAAATTTGAAGTTCTCTTGAAAAGAAAGCAAAAG AAAAATCATGATGCTAAGGAAATCTTTTCTGGTAAAATGGATTCAGCATTTATTACAATAGATGTTAGTCATTACCTAGA AGATGTTTTAGTACGGTTATTTTTATTACAATGACCATCTGAAATTTTCGGAAGGATTCTGAAATTAGAGACAAATGCAG TGCATTCTCGAGACAGACAGAAAGATCAGAAAAAATGGGTAATAAGGTTCTGGTGTGGTTACACAATTAAGTGCATGTTT GAAAATTCTTCTACCATTGATTCTAAATCCAAAATCAATTATGAGGATGTCAGAATTGATTCTGAGAAAATAGAAGCAGA TCCAAACATGCTATAACATGTTCAATAATCTGTTTTGCTGTAGTCTTGTTAGACTCATCTTTATTATCAGCCTTAAAATA ATACCTTCATTGGTCATTTTCATGGATATGGAATGTTTAGTCATCAATTGCTTTAGTGCTCTTTTTTTATTTGCTGCAGG ATTGGGACACACAAAATGCATCACAAATTGCTACTGAGTTGTGCGGTTTCGTCACAATTTTATCTGGGACGTTTCTCCTT CACAAAACTAAAGATATGGGAAAAAAACCTACAGACCAACCCCCTGTTTTCTCAACTCCAGACCGTGATTACGATAACTC AGCTTCCCGATAGCCACAGATTTTTGAATCTAGTCAGAACACCAATGGTGTTTTCACCTTTGTTCCCAAGCTAAACAGCT TTGAAAATCTGATGAAGGTTATGCCATGGTCTTTCAAAGAGAAGAAAGTCTGAAATGATATGGTATTGTCTGCTTCCATC AAGCTTGTAATGTCGAAAAAGGCAAAGCTGAAAGTATGATATGTTAATGTGAAGAGTTACAGGAAGCATTTCTAACACAT TTTGAGAACAATACCTTAACTTAGTTTCTTATAGAATGAACAAACAGTTTTTATGTGAAGTTGTGCATAGCAAATAGCAA GGTAATCTTCATTAATGAGATTATGATCCTTGGAACTGATTTTTTAGTTCCTATCATGGTCTTCAACCACTTCAATGCCA TCATGAAATATTCATTCAGCTGAGTGTATGTATTGTAAGATCAGTAAAGAAGTATAAAGTTTTTTAAGCTTTTCTTTTCT GTTTGTGCCAGATGAATCCATATTTTATTATATAGGCCAAAATCTAGGCACAATAGAACGAATATGTAACTACTATCTTA GCATGTTTCTGAGCTAAGATTACACTTAATTTGCTGCTTATTCAGCTGCAAACTTTAGAGGGAGACAAATACTCCTGATG TGTTCTGCTTTAATGGGCAAGAAAAGGGGCTCATGAGAAATAATCAAACACATTTGAGTAATGATGATTGTAAAATGCAT TTTTTGAACAATCACTAGAAAACAATGAGAAACTCTACCACAATACTTTTTTTAGTACTTAGCAGTCCAAATTTTACACA TAGGTGGGG
CDS sequence (LotjaGi4g1v0372300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATTTCTTCTGACAACGTAACTGGGCTTGTTCTGGCGGTTTCTTCCAGCGTTTTCATTGGCTCCAGCTTCATTGT TAAGAAGATGGGGTTGAAGAAAGCTGGGAATACAGGGAAAAGTGCAGCCTCCGGAGGGCACGCGTACCTGTATGAACCGT GGTGGTGGGTTGGAATGACCTCAATGATTGTTGGAGAAATCGCCAATTTTGCAGCTTATGCATTTGCTCCTGCACTACTT GTCACTCCTTTAGGAGCTTTAAGCATCATTTTCAGTGCAGTACTTGCTCACTTTATCTTGGAAGAGAAATTGCACATCTT TGGTGTGCTTGGATGTGCTCTCTGTGTGGTGGGATCTACCACTATTGTTTTGCATGCTCCACATGAAAGAATTATTCACT CTGTTAAGGAAGTGTGGCAGCTTGCTACAGAACCAGGTTTTCTTGTCTACACTTGTTTAGTCGTGATTCTTGTCATCGTC CTCATTTTCTACTTTGTTCCAAGATATGGACCAACCCATCTGATCATATATGTTGGAATATGTTCTCTCACAGGCTCACT TACGGTTATGGGTGTGAAAGCAGTGGGAATAGCTTTGAAGCTTACATTTGAAGGTTCCAATCAATTCACTTACTTCCAGA CCTGGTTCTTTACGCTTGTTGTTATAGGGTGTTGTCTTCTGCAGATTAACTACTTGAACAAGGCTCTGGACACCTTTAAT ACTGCGGTTGTGTCACCCGTTTACTACGTCATGTTCACATCGCTTACAATCTTTGCCAGCATAATCATGTTTAAGGATTG GGACACACAAAATGCATCACAAATTGCTACTGAGTTGTGCGGTTTCGTCACAATTTTATCTGGGACGTTTCTCCTTCACA AAACTAAAGATATGGGAAAAAAACCTACAGACCAACCCCCTGTTTTCTCAACTCCAGACCGTGATTACGATAACTCAGCT TCCCGATAG
Protein sequence (LotjaGi4g1v0372300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGISSDNVTGLVLAVSSSVFIGSSFIVKKMGLKKAGNTGKSAASGGHAYLYEPWWWVGMTSMIVGEIANFAAYAFAPALL VTPLGALSIIFSAVLAHFILEEKLHIFGVLGCALCVVGSTTIVLHAPHERIIHSVKEVWQLATEPGFLVYTCLVVILVIV LIFYFVPRYGPTHLIIYVGICSLTGSLTVMGVKAVGIALKLTFEGSNQFTYFQTWFFTLVVIGCCLLQINYLNKALDTFN TAVVSPVYYVMFTSLTIFASIIMFKDWDTQNASQIATELCGFVTILSGTFLLHKTKDMGKKPTDQPPVFSTPDRDYDNSA SR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 309 | 309 | 5.9E-177 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 309 | 309 | 5.9E-177 | – | |
| Pfam | 6 | 298 | 293 | 8.3E-133 | ||
| TMHMM | 10 | 27 | 18 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| Phobius | 33 | 52 | 20 | - | – | |
| Phobius | 53 | 75 | 23 | - | – | |
| SUPERFAMILY | 53 | 126 | 74 | 6.02E-9 | – | |
| TMHMM | 54 | 76 | 23 | - | – | |
| Phobius | 76 | 80 | 5 | - | – | |
| TMHMM | 80 | 99 | 20 | - | – | |
| Phobius | 81 | 100 | 20 | - | – | |
| Phobius | 101 | 106 | 6 | - | – | |
| TMHMM | 106 | 125 | 20 | - | – | |
| Phobius | 107 | 127 | 21 | - | – | |
| Phobius | 128 | 146 | 19 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 147 | 167 | 21 | - | – | |
| Phobius | 168 | 173 | 6 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 174 | 199 | 26 | - | – | |
| Phobius | 200 | 210 | 11 | - | – | |
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 211 | 231 | 21 | - | – | |
| Phobius | 232 | 242 | 11 | - | – | |
| TMHMM | 242 | 264 | 23 | - | – | |
| Phobius | 243 | 263 | 21 | - | – | |
| Phobius | 264 | 274 | 11 | - | – | |
| TMHMM | 274 | 293 | 20 | - | – | |
| Phobius | 275 | 292 | 18 | - | – | |
| Phobius | 293 | 322 | 30 | - | – | |
| MobiDBLite | 297 | 322 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0372300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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