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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0376000 |
| Transcript ID | LotjaGi4g1v0376000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF616 protein; TAIR: AT4G38500.1 Sept9 (DUF616); Swiss-Prot: sp|D1ZMX7|LCL2_SORMK Long chronological lifespan protein 2; TrEMBL-Plants: tr|A0A072TTY8|A0A072TTY8_MEDTR Plant/F20M13-60 protein; Found in the gene: LotjaGi4g1v0376000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75485641..75489845) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGTTCTAGTATTGTTTTCCTTGTCATTCATTTCAGATGCTAATAATGCCTTTCCATAACTGTGTTTGTGTGTGTGT GTGTATCTATTGCTTATATTTTCAACTTTTTGTTATGCAATTGCAGTAATGATAAGTTGAAGGAAGAATCAAATATGGAG GTTGATCTTCAAAAGTCTCTTTCTTCGCGCCTAAATCGAAGAGGAGACCGAAGTAATCAAAATCCACAAGCTAAAGGTCA GGAAGGGCTGTTATCAAGTATATTTTTTTTCTAAATGTGGGTGAAGTCATTAGTTAGATTGTCTTTGGTGGATAAGCCAA GTTTGTTTGTTGGTAATGCAGATTTTGAAATGGGCTTCTTTTCCTCAGGGAGGGTACCCCAAGATTACCCCATGAAGATT GTTTGGAAGAAAGGGTTTATTCGATTGATTCTTGTAATAGGGATCTTGTGGATGTTACTAATTCTTATTGCATTGTTGTT CCATATATGGTCTTGTCAATCTTCTGTTTCCTTTTTATCAGGTTAGTAATCTTTTAATACATTTGGTTACTTCTTGGGAG TCTTCTTAAGTTCTTCTCTTGTCTGTAACCCTTCTGATTGTCATAACATAGACTTTTTCATTTCTGTCTATTTTTAATAT GATGATAATTTGGAACTAGGTAAACGGGAATGAATAACATCATTTTATATTTTAGCTTTGAGCTTTATAGCTACACTATG CCTGCAAAATTTAATGATGCCTGGTATTAGAAAATCATCAGTCATAGGAAGTTTCTTGCCTTACATAAACACTGGCCTTT GAAAAGAACAGTTTGGAGATTCATTTCTCTCTCTCTCTCTCTAATCTATTAGTTGTAAAAAAAAGCATATTTATCTAGTA GTACGCTAGTACTAACTGTGTAGTAGGTTGCTTACCAAATTTATATTTGAGGATAAGAATTCTAGAATGCATCCTGGTAG TGAATTGAATTTAATGCAACTCATTCTTGTTATTTTTCCTTTCACGTGATGGTTAAGAGGGCTTTCGTCAAGGGAAATAG GACTGCGCACTTGTCTTATATTTTATAATTTTATATATAGCTCTTTGTGACTAACATTAGAAGCGAAAATACCTAGAATT TGATTGATGGGTTTAGATTCAAACTTGCTATGACCTATGAGTAGGAATACAGGATAATCACTTGGTTGGAGGTTCTGTTA GGTTATTAAAAGGCATGCTTCAAGGAAAGATTGTTCAACATAGGCATTCTTTCTTTATCAATTATTTTCTTCTCCAAAAT TACAATATTATGTCATCATTTCTGAAAATTCAGCAATTTTCTACTTGACCTGCAGCTATGTGTAATAAAGATAGCAAGGT TTATACCATGTTAGACACTATGGGACTTGTATCAAAACCTCACAGTAAGATTTTGGCAGTTTTTCATCCATCCATTCTTT TTAGACTTAGCCAAATAATAACTAATGATTGATATCGATGCTACCTGTATTCATTAGGGTGTCCAATTCCTCTTTCCAAT GACCCTGATAAGATAGTTATCCCAACTGGAAGAACTCCTGACAATGATGTCAAAAAATTATTGTATGTTATGGAAGATGA GGTTCCACATAATGGTTCTCAGTCATCTCCTCTGTTTGGAGGCCATCAAAGTTGGAAACAGAGGGAGCAGAGTTTCGAAC TAAAATCAAATATGAAGGTAACCATAATTTGATTCAGTCCATTTTAATTGCAATTGCTTCACAGTTTTGTAAGATTATGT TGTTGTTGCCACCATAAATATGTCATGGTTCCCATTCACTTCATCCCTCAGGTGCACTGTGGATTTATCCAAGGTGGTGG TGCTGACATGGATCCTTTAGACATCAAATATGTTAAGAAGTGCAAATTTGTCGTGGCATCTGGTATTTTTGATGGCTATG ACATCCCTCATCAACCATCAAATATAAGCGATCGCTCAAAGAAGCTTTTTTGCTTTCTTATGGTGGTGGATGAAGTATCT TTAAAATTCATGAGGGAAAATAGTACTGTCAAAGAAGACAATGCTGGTGGAAAATGGGTGGGAATTTGGCGACTTGTGCT TCTTAAGAATCAACCTTATGATGAACCAAGAAGGAACGGGAAGGTTCCTAAAATTTTGACCCACAGGTTATTCCCTCAAG CACAGTATAGTATATGGATTGATGGTAAAATGGAGTTGATCGTGGATCCATTGCTTATCCTTGAGAGGTACTGTATCCGT TGTCATAGTGTATGCCTAGGCTTTGTGATAATATGGACTTTTCAATCTGATTCTCTTGATAGTTATTTAAACTGCTATCT TTTTGTTTCTTGTTAGAAGGATAAGAGAAAAAAGCATTTGGTTTTGAATTTGATATTACCGACGCTTGATAGTTTCCACC ACCTGTCTAGGGTTGGGCCTCACCTAGTAAAGGCTTGGATGATGTTTGTTTTGAATTTGATGACATATCTCATGCTCTTA CCAGTTAATTACACAATAACCATTCGTAGGCTCATCGATTTGAAGGGTTCAATCTTGAATTTTTTGTGTTCCTGTTTGTC TTGTATATAGGCTTAGAGATTTATAATCACGAAGTTGGTGCATTATAGAAGCAAAATATATGTTTGCTTGGAATTTTCTT GTAATGTGTGTTAATGGATTTCCCAAGTCACCTCTTGTGATTAGTTTGACACTAACACTCCCCCTCCTTCCTCCCAAACA AATAAAAAATGTTATTTGAAACTGTTAATATTGATGTTTTATACCAGAACAAATATTTTTCCCCAGGGTTACTTCCCTTG TGTTTATTTGCATTTGACACTTAGATCCTTGTAGGATAACAACATATGTAGTTTTGTTGGAGAGCATCAGTTCATATAAT TATACATTGCACAAGAAATCCTAGTTTCCAAAATATAAAGCAGGATAACTTTGAAAAAGCGTTTATATTTCAACCAACAG GAAAAACTACAGTGAAACCATTGGCATAATCTCTTCCGTTAAAGTTTCATCATCAGAGCTTACTGCATCTGCATTGATGT ATAATCTGCCAACCATTTCTATGCGCCTTTTTGTTTCTCATGTCATGTGATATAGGATTTTACATTTTGAAAACACTCAA CACCACAAGGGGTCCAAGCCCCAAAGTAATAAAGGCACTTGTTACACCTTATATGAACAGTTAGAATCTTGATGTTGGAT ATTGTGATGACTGTAACTTTGTAAGGTTATCTTTACTATGCAGATACCTGTGGCGAGGGAAGCATTCATTTGCCATTGCT CAACATAAGCATCACCGCAGTATATATGAGGAGGCTGATGCAAACAAGAGGAGAAAGCGATATGCACGGCCCCTTATTGA TCTACATATGAAAATCTACTATTATGAGGGAATGAAGCCATGGAGTTTAGATAAAAAGACTGTTAGTGGTAAGACAGGAA TCGAGAGTTCCTGGTTTTGTATTTTATGTTGACTGTTTGATTTCAACAATTTTGGGATTATATTCTAACTTCTAAGGGGA AATCTGTGGAATTTTTACACCTGAGCCATGGTTAGTCTGCCAAAAATCAAAATAACCATAGAAAGTAAGCCTTTGGACTT AAATCTCAAAATTTGGGTTCCTGTCAATAAATGACCTGTTTGGTTCAAATGAAAGGTCACACAGAAAATACCATGCGAAT ATGAGCTTATCTATTTCTCTGTTGACTTCAGTTGATATGTATGGTGTGCCAATGTCAATGCTTTATGTAGGCTTCAACTA GTGAACTGCATGTCAAGTACTTGTATTTGTGCACAGTAATGTTATATTTGTTATAATAATTTATGATTTTTCAGATGTCC CAGAGGGAGCCATTATCATTCGCGAACATACTTCCATCAACAACTTGTTTAGTTGCTTGTGGTTCAATGAGGTTCACCTC TTCACTCCCAGAGATCAACTGAGCTTCGGCTATGTCGCGTACAGATTAGGCGATGCCTTCAAATTCTTCATGTTTCCAAA CTGTGAATACAATTCAATTTTTGTGTTGCACCCTCACACAAGAGAGCACTCTTCTCCCATTGAATGGGTTAAAGAGTTGG ATCAACTTAAGAAGCATAGCAATTTAAAAGAAAGTAGGGGAGGATTAGGCTTGTTTACCCCTTATCCAGGGGATCTTGAT TCAGTTGTTCTGCCAAATGTAACAAGAACATCAAAAGCTGGCTGA
CDS sequence (LotjaGi4g1v0376000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAATGATAAGTTGAAGGAAGAATCAAATATGGAGGTTGATCTTCAAAAGTCTCTTTCTTCGCGCCTAAATCGAAG AGGAGACCGAAGTAATCAAAATCCACAAGCTAAAGATTTTGAAATGGGCTTCTTTTCCTCAGGGAGGGTACCCCAAGATT ACCCCATGAAGATTGTTTGGAAGAAAGGGTTTATTCGATTGATTCTTGTAATAGGGATCTTGTGGATGTTACTAATTCTT ATTGCATTGTTGTTCCATATATGGTCTTGTCAATCTTCTGTTTCCTTTTTATCAGCTATGTGTAATAAAGATAGCAAGGT TTATACCATGTTAGACACTATGGGACTTGTATCAAAACCTCACAGGTGTCCAATTCCTCTTTCCAATGACCCTGATAAGA TAGTTATCCCAACTGGAAGAACTCCTGACAATGATGTCAAAAAATTATTGTATGTTATGGAAGATGAGGTTCCACATAAT GGTTCTCAGTCATCTCCTCTGTTTGGAGGCCATCAAAGTTGGAAACAGAGGGAGCAGAGTTTCGAACTAAAATCAAATAT GAAGGTGCACTGTGGATTTATCCAAGGTGGTGGTGCTGACATGGATCCTTTAGACATCAAATATGTTAAGAAGTGCAAAT TTGTCGTGGCATCTGGTATTTTTGATGGCTATGACATCCCTCATCAACCATCAAATATAAGCGATCGCTCAAAGAAGCTT TTTTGCTTTCTTATGGTGGTGGATGAAGTATCTTTAAAATTCATGAGGGAAAATAGTACTGTCAAAGAAGACAATGCTGG TGGAAAATGGGTGGGAATTTGGCGACTTGTGCTTCTTAAGAATCAACCTTATGATGAACCAAGAAGGAACGGGAAGGTTC CTAAAATTTTGACCCACAGGTTATTCCCTCAAGCACAGTATAGTATATGGATTGATGGTAAAATGGAGTTGATCGTGGAT CCATTGCTTATCCTTGAGAGATACCTGTGGCGAGGGAAGCATTCATTTGCCATTGCTCAACATAAGCATCACCGCAGTAT ATATGAGGAGGCTGATGCAAACAAGAGGAGAAAGCGATATGCACGGCCCCTTATTGATCTACATATGAAAATCTACTATT ATGAGGGAATGAAGCCATGGAGTTTAGATAAAAAGACTGTTAGTGATGTCCCAGAGGGAGCCATTATCATTCGCGAACAT ACTTCCATCAACAACTTGTTTAGTTGCTTGTGGTTCAATGAGGTTCACCTCTTCACTCCCAGAGATCAACTGAGCTTCGG CTATGTCGCGTACAGATTAGGCGATGCCTTCAAATTCTTCATGTTTCCAAACTGTGAATACAATTCAATTTTTGTGTTGC ACCCTCACACAAGAGAGCACTCTTCTCCCATTGAATGGGTTAAAGAGTTGGATCAACTTAAGAAGCATAGCAATTTAAAA GAAAGTAGGGGAGGATTAGGCTTGTTTACCCCTTATCCAGGGGATCTTGATTCAGTTGTTCTGCCAAATGTAACAAGAAC ATCAAAAGCTGGCTGA
Protein sequence (LotjaGi4g1v0376000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNDKLKEESNMEVDLQKSLSSRLNRRGDRSNQNPQAKDFEMGFFSSGRVPQDYPMKIVWKKGFIRLILVIGILWMLLIL IALLFHIWSCQSSVSFLSAMCNKDSKVYTMLDTMGLVSKPHRCPIPLSNDPDKIVIPTGRTPDNDVKKLLYVMEDEVPHN GSQSSPLFGGHQSWKQREQSFELKSNMKVHCGFIQGGGADMDPLDIKYVKKCKFVVASGIFDGYDIPHQPSNISDRSKKL FCFLMVVDEVSLKFMRENSTVKEDNAGGKWVGIWRLVLLKNQPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVD PLLILERYLWRGKHSFAIAQHKHHRSIYEEADANKRRKRYARPLIDLHMKIYYYEGMKPWSLDKKTVSDVPEGAIIIREH TSINNLFSCLWFNEVHLFTPRDQLSFGYVAYRLGDAFKFFMFPNCEYNSIFVLHPHTREHSSPIEWVKELDQLKKHSNLK ESRGGLGLFTPYPGDLDSVVLPNVTRTSKAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 63 | 63 | - | – | |
| PANTHER | 12 | 511 | 500 | 5.2E-282 | – | |
| PANTHER | 12 | 511 | 500 | 5.2E-282 | – | |
| MobiDBLite | 19 | 39 | 21 | - | – | |
| Phobius | 64 | 88 | 25 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 89 | 511 | 423 | - | – | |
| Pfam | 149 | 456 | 308 | 5.2E-134 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0376000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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