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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0377400 |
| Transcript ID | LotjaGi4g1v0377400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification protein; TAIR: AT1G06330.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|F4IC29|HIP28_ARATH Heavy metal-associated isoprenylated plant protein 28; TrEMBL-Plants: tr|I1K3Y5|I1K3Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0377400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75636986..75639183) extracted from Lotus japonicus Gifu genome v1.2.
GCTTGAAATAAATATTATTTTCTAAATTATATTATTACATTTCTTAATGATGTTGCATGGTACTTCTCGCGGGTAAGATA AACTTTCATCATCTCTAGTCTCACTACCTATAAATAGGACATGATCTTGATGACTTAATTTCATCCTCAATTATAGAAAT AGAAGCTCTCGTTGCATTCTGGAAACGTTTCTGACCTTAACTTCCGAAAATGACGGTTAGAATCACTATTATTATTTTTT CCTACTGCTCTCGAATTATGTCGTGAGTCCTACTAACAAATATCCTAAGTATACTAATTAATTTGAAAATAATAATTTAT TTAATGGTTACGAGCGATATTTTTATTTTTCATTAAATTATAATGTGATAAGATTTTGAAATCTAATTAGGTATATATAT TGATATATGTATAAAGCCTTATCCCACTTTCTGAGGCTGCTGAAGTCTTGAAAATATCGACAATGGTGTTATGGTGATGA TGCCAAAGTTCAAATAATTTTCTGCATTATGGCATATATATTCCCGTTCTGATCTTTAATTATGATATGTGTAAGACTTT ATTTCTCTATTTTGCAGATAGTAGAGATGTGTGTGCACATGGATTGTGCAGGTTGCGAAAACAAGATAAGGAAGGCTCTT ACAAAATTACGTGGTACATAGAGACAACCTTTTTTCTTTGGTCGAATAGCAAACCTTACCTTAATTTAATTTGTTTATTA AAATAAACTGAAAATATATTATAAGTAAGTGTAATTTCTTATTAATAACCTAAAGCTAAAAATAGTCTATAGGACGGTCG TGAAAATATGCATTTTTTCTTTGGAATGAGCTAATTTGAAAAATAAGTAAGCTGAAAATATGTTATAGATAAGTACTATG TACTCCTAAGTGTGAGCTTTTATTAATAAGCTATATTAATATATAGGAAAATAAACTAAAAAATGCTAATAGGTAGAAGT GAAATTAAATTTGCATTTTTACATTGTGCAAATCGAGATGGCTTTATGGCGTCCAACACTTGTTCAAGTGCTAAACCGGT ACACTATTTGTTAATTTGTAACCATGTAACATAATGGTTGTAATTTGAAAAAATTATTGTAAAATAGTTGCTAGATAATT AGTTGCCAAAAAGCTAGGAATTTGCTATAATGGTTTATACGATAGGGTATTGGAACTCCAATTGCCTTAAGGAATTTTGG ACTACACCACACCCACAATTCAAGCCACCACTCTCATGGACCACCAACCCCATTTTCGGCTCACGCGCAACGTGCTCAAC ACTCGTAGCTACCGGTGGAAATTGGACAGACCATGTTTTGTGCGGTTCAAGCCTGACGTGCATTCTAATTTCGCAGCTCA AACTTGACTTGTGGCATGTCATAAGCAAAATTCTAAGACCTGACCTGACCTAAAACTTTAGATGGTTTGACCTTACCTAC TAGCCTGATGTTTACAAGTCTATTTAACAGAAAATTTCATCTTAAAGAGATAATAGGCCAACAGATTAATAGATCTATCT ACATATCATTGTGCATCTTCATTTATTTATATTATTAATAAAAATATTAATCATGTAAACATATTGGCCTATCACAATAT TTTAGTAGCAGTATTTACCTTCACCATCCCAACCGGTGGTGGACACTTGACGCCCGATTCAAACATATCCTAACATGCTG ATTCAAAAACTTGTGTATGTTGTATCAGGAGTTGATAGTGTTGAGATAGACATGGGGATGCAAAAAGTGACTGTGATGGG TTGGGCTGAGCAAAAGAAGGTTCTAAGAACAGTAAGGAAAACTGGCAGGAGAGCAGAGCTGTGGCCATATCCTTACGAGC CAGAATACCATGCCTTCACACGCAATTACTCCTACAAGCCTTCCTCTTCTCACAAGCATGGATACAGCAATGGTGAAGAT TTTGGGTATTACAGGAAGCCAATTGGTGCTACATTGATCAAAGAGAAAGCCATGGCCATGTTCAGCGATGACAACCCTCA TGCTTGTTTTATAATGTGAATTGATAATTAAGTATGTATCAATTGATAATGTGTGTTTGTATTTCAATTAACACACATTT CAATATAATTTGAATATGCTTTTCGCCTAAAACGTGTCCTTTTTTACTTCCATGTATCAATGTGGACTAATACATATACC ACAATGTCAGTCATTATAAAAGAAACCTGCTGCTTAAT
CDS sequence (LotjaGi4g1v0377400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGATAGTAGAGATGTGTGTGCACATGGATTGTGCAGGTTGCGAAAACAAGATAAGGAAGGCTCTTACAAAATTACG TGGAGTTGATAGTGTTGAGATAGACATGGGGATGCAAAAAGTGACTGTGATGGGTTGGGCTGAGCAAAAGAAGGTTCTAA GAACAGTAAGGAAAACTGGCAGGAGAGCAGAGCTGTGGCCATATCCTTACGAGCCAGAATACCATGCCTTCACACGCAAT TACTCCTACAAGCCTTCCTCTTCTCACAAGCATGGATACAGCAATGGTGAAGATTTTGGGTATTACAGGAAGCCAATTGG TGCTACATTGATCAAAGAGAAAGCCATGGCCATGTTCAGCGATGACAACCCTCATGCTTGTTTTATAATGTGA
Protein sequence (LotjaGi4g1v0377400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTIVEMCVHMDCAGCENKIRKALTKLRGVDSVEIDMGMQKVTVMGWAEQKKVLRTVRKTGRRAELWPYPYEPEYHAFTRN YSYKPSSSHKHGYSNGEDFGYYRKPIGATLIKEKAMAMFSDDNPHACFIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 67 | 67 | 1.57E-16 | ||
| Gene3D | 2 | 65 | 64 | 8.5E-18 | – | |
| PANTHER | 2 | 130 | 129 | 1.5E-61 | – | |
| PANTHER | 2 | 130 | 129 | 1.5E-61 | – | |
| CDD | 9 | 64 | 56 | 1.49619E-14 | ||
| Pfam | 9 | 61 | 53 | 5.6E-16 | ||
| ProSiteProfiles | 10 | 65 | 56 | 12.569 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi4g1v0377400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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