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LotjaGi4g1v0384900.1

Overview

Field Value
Gene ID LotjaGi4g1v0384900
Transcript ID LotjaGi4g1v0384900.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description T-complex protein 1 subunit alpha; TAIR: AT3G20050.1 T-complex protein 1 alpha subunit; Swiss-Prot: sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha; TrEMBL-Plants: tr|A0A0L9TJL4|A0A0L9TJL4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76329041..76337004) extracted from Lotus japonicus Gifu genome v1.2.

TATAAAGCACTTGAAATTGCAAGGTTAAAATAAACACAGAGAAAAAACATAAAAGGAAAAGAGAAAGAAGCATTGCTAGG TCGAAGTTGAAAAACCCTTAGTATCGAGACTGTGCTGCTCTGAGTGGAACGGAAAAGCCCTAGACACTTCGCGATGGCGG TGAACACGCAAACCCCTGACATCTCCGGCGAGCGACAATCCGGCCAGGACGTTCGCACCCAAAACGGTTGCTCCTCCCTC TCCCTCTCCCTCTCTCTCTCGCTCATTCTTCCGCCGTATCTAACCGCCATTTCTATCTAACATGCTTTCTCTGTGAACGC AGTGGTGGCGTGCCAAGCCGTCGCTAACATCGTCAAAACCTCACTAGGCCCCGTTGGCCTTGACAAGGTGAGATCCGTCT TCTCTCTCACTCTTTCTCTCTCACATTCGTTGATCTGGTTTCATTTCCTGTGTTTCTTCGCGTTTCAGATGCTTGTTGAT GATATCGGCGATGTCACCATCACTAACGACGGCGCTACCATACTCAGGATGTTGGAGGTTGAGCATCCCGCCGCTAAGGT GAACGGAACTTGCCTCATTTGTCGCGGTTGCGTTCGCATCTTCACGCACGTTCGATGTTACTGACTCTGTGTTTGGGTTT TCTTTTTGTTTAGGTTTTGGTGGAATTGGCTGAGCTTCAGGACAGGGAGGTTGGAGATGGCACCACTTCAGTTGTTATTG TAGCTGCTGAGCTTCTCAAAGTAACTTCAATGCTTGTCAATTTCTACATCATTTACTTGCATTTCATCTCACCAATTCAT GTATATAACATTTCCTGTTTTTTTGGGTGCAGAGAGCAAATGACCTTGTGAGGAATAAGATCCATCCAACCTCAATTATC AGTGGATATAGAGTGAGTCAATTATTTGTTTTTAATTTTATGTAATTTTTCTAGGCAATTTTTCTGGTGTATGAATTGGG AATTTGCATTAAAACCTTATTTTTAACTTCTCTTCATGTTGATTTCTGTGGATAGCTTGCGATGCGAGAAGCTTGTAAAT ACATTGATGAAAAACTTGCTGTCAAGGTAAGAACCTCTTAATAACTATTTCTATATTATGTTTTTGTAAGCTTTACTATT TTCAATCTTCTATGCCACTCTATATTAATGCTATTGCTGACTTACATGAAAGCTAAAGATGTTGCTAAAAAAAATACCAC ACTACTCTGATATGCTTATTGTTATAGTTTTGTATGTTGCATCAATTTTAAAATCATTAAGTAATGCAGAAAGAAGCTAA TGATGTGATAAGTATTGATTGGACTTTGGTCCATCTCTTATTCTATGAGTAACTTGCTACGAGTCAATTGGCCATTGTCT GTCTGAAGATTAATGCATTTGCAAATTATGTTGCATGATATATGTTTCTTAATTAGATTGTGTTCTCTTGACTTATAGGT TGATAAACTGGGAAAGGATTCACTTGTAAACTGTGCCAAGACCAGCATGTCCTCAAAGTTGATAGCTGGTGACAGTGACT TCTTTGCCAATATGGTAATTGCCATGACTTTACTGGATGTTGAAAGTTCATATTGCCTGAAATTGATGCAAACCATATTT TGGGGGCCAACTTTAATTGGTTGCCTACACCTTTCCGTTTCTTGTCCCAAATATGTGTGTATTATTTTTACTTATAACAT AGCTTTTTACTGTATTTTACTTTCTGCTCGAGAATAAAAACATTTAAATATTTTATTGGTTTAGTTATGGTTTCCAATTT TTGTATGTTGAACGTGTGTAGTTGTTTATCAAATTGTTCAACTATCTTCTGAAAGATTCTTAAATTATCCTATTAATGAT AGTTCTTAGGTATAATACTATGTTAGTTCTGTTTCATATCATACTTTAGAGGCTGACATTGCCATTCGTTGGCTAGTATA ATTCAGATTTTGCATTAACTTCTTCTATGGTTCATTTGAAAATATTTGGTTACAAGCCATTGGTAATGATTACTAAATAT CAAAGGTTCAACTCTGGTGCAAATCTAATTTGCGCTGACATCTCTTATTGCTTCCTTCTTTTGTTATCTGAAATGATAGA GCAATTGAAAATAATAATTGGCCAGGCAGTGAGTGATGCCACTGGAAACTGTGCAATAAAAACTCCTTTCATTATTCTGA GAATGTTCTTAAAATCAATCCAAATGATGTCAATGTTAGTAAGACATTGAAAGTTTTCAGACTCTGCTTCATTAAAATTT AGAAGTTCAAAACCTTGATGGAAAGTAATGAATGTTTTGTGGTTCATCATATCATTGTTTGATTGAAGCGAGTTAATTAG TTGATAAATTTTTGATCTTCGTGTTGAATTTGATGGTCACAGTTTCAATTTTGGGGTTATGGTCCATGTAATTTTCGAAT GCTAACTGTTGTTTCTGAATGAGTTTATTTGGCTGTATGCACTGCAGATAGGTACTCATATTGTGTCTGTAATGAAACTG GTTTTTATGTGCAATTTATACAGGTTGTAGATGCAGTGCAGGCTGTAAAGATGACCAATGCTCGGGGTGAAGTTAAATAC CCAATTAAGGTTGGTAGTGGAATTCCTCTTATCTGTTTCTCATGAGGTTTTCTTACTGGATGAGAGATAGCAACTCTGAG CAATATGTTGAATATCTAATATTATATCCATTGTAAATCTTGCTTCTTATGCGCTTTAACAATCGGACTTTTGATGGATT TAATTCTGTTTCATTACCTTCCATGTCACAGGGAATCAATATATTGAAGGCTCATGGAAAAAGTGCTAGAGACAGCTTTC TGATGAATGGTTATGCTCTAAATACTGGCCGTGCTGCTCAAGGAATGCCTCTTAGGGTTGCCCCTGCAAAAATTGCTTGT CTTGATTTCAATCTTCAGAGGACAAAAATGCAATTGGGTGTTCAAGTATTAGTCACTGACCCCAGGGAGCTTGAGAAAAT TCGTCAAAGGTATTGTCAATGCAATCATATGACTTCTATATTATTATGAGACCTTCGTAAATTAACATACCCTTAAATAT AATGAGAATAATTTCATTATTATTATTGGAAGTAATCTGTGAAAGATAGGCATAGAACGGAATTATTCTGCATGATAACT ATGAAGTTACTCATTAGCGCAGCTTGTAATATTATGGTTAATAATCTAATTGTGTAATTGTTATTGGTTTTCTGTATATT TATGCAACATTGTAATCTCATCTCGTGTTGTTTCATTGTTGAAATTTTATTGTGCTTGGTTTAGGACTATTCACCACCCT TATCATCTGCATGACAAAGTGATATCTGGAATAAATTTTAACAAATGATATTTTTCCCCCTAATTGCAGAGAGGCTGATG TGACTAAGGAACGTATTGAAAAGCTACTGAAAGCTGGAGCCAATGTTGTTTTGACTACTAAAGGGATTGATGACATGGCA CTTAAGGTATTTTTCTTCCTACTTTTTGGCACTTTTTTTTTTATAATGATCTTTATCTTTGAGCTAGAGGATTTAGTTAT AGTTTTTCATGTGGGCATCCAAATAAAATATGACTTTATCTTTCGATATCATCTGTTGATTGTTTAGCATGTTATCCTCT TTTTCTCATACTGTAAAATTGGTAATCTTGACATCTGGTCTAATAGATGAAGTAAACTGTACTCTATAGCAGTTGAATCA AGTACATTCAAGTTAAAATGTTTAACTTGAAATCACACCAAACTTGTGACATCTATGGATCTTTATGTGGCTTCCAATTT TCTGCTTCCTGCATGAATAGATGTCTTGGGTCTAATTGATGGACTGTGCTTCCATGTTTAAATTACATGTTTTGTTTCTT ATGACTGGTACAAAGGATCATGAATATAACAATTAAGTGTTTCTTTCTTACTATTTATTTCTTGTTTCAGTACTTTGTTG AGGCTGGGGCAATTGCTGTTAGACGTGTGCGGAAGGAGGACATGCGACATGTTGCCAAAGCAACTGGTGCAACATTGGTA GGCTTTTGTTTAATTTAAATGATTTAAACTGCAATGAAGTACATTGGCACTTGATAGTAAACTGAATTTCACTGACACTC CAAATTTTATGTTAATCCATCTTTTCTTCTTTCTAATTTCTAAACTTCCCTTATACTCGAGTAGTTGAATAAATCATTGT TGATATTCGTATGAGTTGTGGAAGTACTATACATGGCTGTGGTTCCATGCTTTATAATTTTTAAGTACTGGTGATTCTGA ATTCCATCAGTCTAGATTATCTAGAATAGTAGTCTTTTGAAGTGTTTTCCATTCTAGAAACCTTTTGGCATTCTGAAATC TGAATATTGAATAACGGGAGCTAATCCTGTATTGCTAATATTTCACAGGGCCATGTTATGTTAACATTTTGTATGTATCT CTTCCCTGAATTTTATAATGCTTGTGTTTATTGATTGGTAGGATGTGGGAAGTGGCTGAGGTGGTATTCACTTGGGTTGT TAAGAGATAATTTTACTATATAAGTATATATTCAAATATTATCCATATTACTTTCCATGTCACTTTTGATTTAAACTTTG ATGCCGTTTACTGGAATGATGTATCCATTCATATTAAAGAATCTAAAGAGACCGTACAAAAGCTGTCCAAGTGTCTGTCT AATCTTTCTCTCACAACTTCTCTCTCTGTTGTGTCAATTCGAACCATGCAGCTTTCTCACTTCCCTTTTATATTAAACCA TCTTTGTTTGTTAAAGATGTATTTATGGGCTTTTTTGTCATGCAACAACTGTGTCTTTGTTTAGCATACTATTTCACCGT CAGACTTCATTTTTACCGTGATTATTTGTCACAGGTTTCAACATTTGCTGATATGGAAGGGGAGGAGACTTTTGAACCAT CATTTCTTGGAACTGCAGAAGAGGTTGTTGAAGAGCGTATATCTGACGATGCTGTAATTATGATCAAAGGGACCAAAACT TCGGGTGCAGTAAGTAGCTGACGTAGAACTTTTTGGCTGTTTTTGATAATAAAATGCATTAAACTAATAAAAAATGTACA AGGAATTTGGAGGAGCAAGAAATTTCCATAGCTGAAAAAGGGAAAACTAAGAACAGATAAACTGATAAAGCATCAATGCA GTCAAACTGTCCAAACCGTTGCATATCTGTAAAGATCTCCCATAAAATGACCAGACCATATGTTTAATACCAAATTTAAG CCAATTGTATAATTGATGAACACTTTAGATTTCTGGGCACACATGCTTTCTCATACCATTGCAGATGCAGGGAAATTGCA ATTTAAAAAAAATGATTCAAAAAATACAAATGACGAAAAGGATAGTAGCATTTCCCTAGCACTGTAATGCTGAACTTTCA CAAAAAGAATCCACTAAATACATTGAGCTAGCTAAAAGATTCCTAAAGGGGGCACAACTGTGGAGGTAGGCTTACATATT TGAAGGGGTGTAGACGTGTAGTTGTCATTTGCTTCATTTTGGAAAAGAGAAGTACAAAATCATTGATCTGCTTGTACTTT AGATGCACTTTCTTTGTTGGCTTGCTGCCATAGCAGCTAAGTTGTATGAAATGAATTGGATAAATATTTTTATCTTGATA GAATTATTCAGTGGAAAAAATATCAATCAGACCAAAAAATGATTTCAACTCGATATTCCCACATCATATAAGGTACAAAT AAGTGGACGTTATAAAACGGTGGAGTTAGAGGAAAAAAAGACGATGATGATTCCTGAAAATATGGTGATAATGAGTATAA ATTTGTTTTGTATTGTTTGGGCCTTTGAGGTGCACACCTGCATATTGTAGATAATATAAATTGTTGCCTGATTTTCTGTA TTTCTATAGGTTTCATTGGTTCTCAGAGGTGCAAATGACTATATGCTAGATGAGATGGACAGAGCTCTGCATGATGCGTT ATCAATTGTTAAGAGAACTCTAGAATCAAATACGGTAATATTCTTTTTATCTAGGGCACAGTCCCTCTCTGCCTATTCAC TACTGATTTCTCAATAAATAAAATGCAGGTTGTAGCTGGTGGAGGTGCTGTTGAATCAGCATTGTCAGTTTATTTGGAGT ACCTTGCTACAACTTTAGGATCCCGGGAGCAGTTGGCTATAGCAGAGTTTGCTGAGTCTTTGTTAATCATTCCAAAGGTA AGAGCCAAACCAACTTAACAGTTTAGGTTTAATTTTTAGATTTTATGCTTATTTACATGTGATTATGGGTGGCATGGCCT AGCTGAACAATTGATGTTAAGTTTGGTCTTCAATCTCAGTTCAATAATTAAAATTTTAGTATATAGTTTTTTTGTAGTTT CTACACAAGATAGTTGATTACTTTGTGGGCTTTCGTGTGGGGTTAATGGATGTGAACAGTAACTTTGTGGCCCATTATTT AACATTAGCTGCTTCACCTTTGTGTTGATTGTTCTTTATTAAATAAGTTCTTATTTCCTTTCTAGCACTAATAATGAGTA TGTTGGGACATTATCTGGTGCAGGTGCTTTCTGTCAATGCTGCTAAGGATGCTACTGAGCTGGTTGCAAAATTACGGGCC TACCACCACTCAGCACAAACTAAAGCTGATAAGAAACATTTATCAAGGTATTTATTTACTAGTAAATAGTCACTTGTATA TTAACTTCGTTACTGTCTTCTTCTGAGGTTTATGGTAATATTTCTGGGTTTGATTAGAGATTCAACTATTATTTCATTAT TGGAATTCATTAACAGAAATTAGTGGCACGTGACAGTTGAAGAGGAAACATATTAAGCGATGATGGATAATCTAAATTTA ATTGTGCATGACCACACAATTACTGTTCTAAGTCTAGCTTGCCCACATTCTTTTCTGTTCCACTAATATAATTGTTTGCT CTTATTTTTTTAGCATGGGCTTGGATCTTTCAGAAGGAAAAATTAGAAACAACTTGGAGGCTGGAGTCATTGAGCCTGCA ATGAGCAAAGTCAAGATTATTCAGGTGCGTATTTAGTAAATATTATCATCCGCTGTTGACTTCGATGACAGTTGTCTAAG AACGTTTCCCTGCTATTTATCAGTTTGCTACTGAAGCTGCTATTACTATCCTTCGAATTGATGACATGATCAAGCTTGTC AAGGATGATGGTCAAGAAGAGGATTAGCGTGTAACCGAATTTTGAGGGCTTTTACTTCCTCGTCCTTGCAGAAGAGAGGG CTTTTACAGGCAGTACCTGTGCATTTGAAGAGGGTAGCTATTTTATCTTAAGTGCCCTTGATGGTCTTGAAGGAAGAATG TTTTGATTTTATTTTTTAATGTAGCGTTTATTCTATTTGTATGTTAGCATTCTATATTCTGACGAATTGTAACCAATATT TTGCACCGGGCCAGTACCACATTTTGCTGTTTTGTCTACATCAGTTGAAAAGTAGTTTCGTGTTTGTTTCATGCATTAGG AAGTTGCATGTTGTAACATGTCTTTCGAAGGCAGGGTTTGATTTAGGAATTTTGTTTCATCATGGTTGGTTTTTATTAAA TACGTACCTGTGTTGGTCTATAATGTAAGTTTATTTTATGGAAACCAGATGACAATCTTCTAATTCAAAGATTTGTAACA GCTTAAGCCTGTCACTAGCCGTGGTTTATGTTTGAAAATGTTAAATGACAGTAGTAGACATATAGAATCAATAAAAGGTT TTTTTTATAAGCAGAATCAATAAAAGGTTGTTTATTTGAGACGACAGTTATAATTTATGCTTTCTTTCAATTCATTTCAT CAATTGGTTGAATGATTGTATTATTTTGAAAAGGTTTTAATAGCACATTTGGTCTCATTTTGTAATCAAGGCCTACCTAA TTTACATAATCTAATTTACATAATGTTTTGTTCACACTTTACTATATGTGAAAAAGTAGCCGAGGGGGGAAATAAGAAGA AATGAGAGAGAAAGAGATGTGATTGATAATATAATTGAAGAGAA 

CDS sequence (LotjaGi4g1v0384900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGTGAACACGCAAACCCCTGACATCTCCGGCGAGCGACAATCCGGCCAGGACGTTCGCACCCAAAACGTGGTGGC GTGCCAAGCCGTCGCTAACATCGTCAAAACCTCACTAGGCCCCGTTGGCCTTGACAAGATGCTTGTTGATGATATCGGCG ATGTCACCATCACTAACGACGGCGCTACCATACTCAGGATGTTGGAGGTTGAGCATCCCGCCGCTAAGGTTTTGGTGGAA TTGGCTGAGCTTCAGGACAGGGAGGTTGGAGATGGCACCACTTCAGTTGTTATTGTAGCTGCTGAGCTTCTCAAAAGAGC AAATGACCTTGTGAGGAATAAGATCCATCCAACCTCAATTATCAGTGGATATAGACTTGCGATGCGAGAAGCTTGTAAAT ACATTGATGAAAAACTTGCTGTCAAGGTTGATAAACTGGGAAAGGATTCACTTGTAAACTGTGCCAAGACCAGCATGTCC TCAAAGTTGATAGCTGGTGACAGTGACTTCTTTGCCAATATGGTTGTAGATGCAGTGCAGGCTGTAAAGATGACCAATGC TCGGGGTGAAGTTAAATACCCAATTAAGGGAATCAATATATTGAAGGCTCATGGAAAAAGTGCTAGAGACAGCTTTCTGA TGAATGGTTATGCTCTAAATACTGGCCGTGCTGCTCAAGGAATGCCTCTTAGGGTTGCCCCTGCAAAAATTGCTTGTCTT GATTTCAATCTTCAGAGGACAAAAATGCAATTGGGTGTTCAAGTATTAGTCACTGACCCCAGGGAGCTTGAGAAAATTCG TCAAAGAGAGGCTGATGTGACTAAGGAACGTATTGAAAAGCTACTGAAAGCTGGAGCCAATGTTGTTTTGACTACTAAAG GGATTGATGACATGGCACTTAAGTACTTTGTTGAGGCTGGGGCAATTGCTGTTAGACGTGTGCGGAAGGAGGACATGCGA CATGTTGCCAAAGCAACTGGTGCAACATTGGTTTCAACATTTGCTGATATGGAAGGGGAGGAGACTTTTGAACCATCATT TCTTGGAACTGCAGAAGAGGTTGTTGAAGAGCGTATATCTGACGATGCTGTAATTATGATCAAAGGGACCAAAACTTCGG GTGCAGTTTCATTGGTTCTCAGAGGTGCAAATGACTATATGCTAGATGAGATGGACAGAGCTCTGCATGATGCGTTATCA ATTGTTAAGAGAACTCTAGAATCAAATACGGTTGTAGCTGGTGGAGGTGCTGTTGAATCAGCATTGTCAGTTTATTTGGA GTACCTTGCTACAACTTTAGGATCCCGGGAGCAGTTGGCTATAGCAGAGTTTGCTGAGTCTTTGTTAATCATTCCAAAGG TGCTTTCTGTCAATGCTGCTAAGGATGCTACTGAGCTGGTTGCAAAATTACGGGCCTACCACCACTCAGCACAAACTAAA GCTGATAAGAAACATTTATCAAGCATGGGCTTGGATCTTTCAGAAGGAAAAATTAGAAACAACTTGGAGGCTGGAGTCAT TGAGCCTGCAATGAGCAAAGTCAAGATTATTCAGTTTGCTACTGAAGCTGCTATTACTATCCTTCGAATTGATGACATGA TCAAGCTTGTCAAGGATGATGGTCAAGAAGAGGATTAG 

Protein sequence (LotjaGi4g1v0384900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVNTQTPDISGERQSGQDVRTQNVVACQAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVE LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYIDEKLAVKVDKLGKDSLVNCAKTSMS SKLIAGDSDFFANMVVDAVQAVKMTNARGEVKYPIKGINILKAHGKSARDSFLMNGYALNTGRAAQGMPLRVAPAKIACL DFNLQRTKMQLGVQVLVTDPRELEKIRQREADVTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVRKEDMR HVAKATGATLVSTFADMEGEETFEPSFLGTAEEVVEERISDDAVIMIKGTKTSGAVSLVLRGANDYMLDEMDRALHDALS IVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHSAQTK ADKKHLSSMGLDLSEGKIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDDGQEED 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 5 539 535 0.0
PANTHER 5 539 535 0.0
TIGRFAM 10 541 532 3.5E-284
CDD 12 538 527 0.0
SUPERFAMILY 13 535 523 6.54E-83
Gene3D 24 533 510 5.8E-180
Pfam 31 536 506 6.2E-153
PRINTS 33 49 17 1.3E-29
ProSitePatterns 36 48 13 -
PRINTS 55 73 19 1.3E-29
ProSitePatterns 57 73 17 -
PRINTS 85 104 20 1.3E-29
ProSitePatterns 85 93 9 -
Gene3D 143 408 266 5.8E-180
SUPERFAMILY 147 409 263 1.07E-28
SUPERFAMILY 210 382 173 7.12E-46
Gene3D 215 372 158 5.8E-180
PRINTS 377 399 23 1.3E-29
PRINTS 411 423 13 1.3E-29

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0384900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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