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LotjaGi4g1v0384900.2

Overview

Field Value
Gene ID LotjaGi4g1v0384900
Transcript ID LotjaGi4g1v0384900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description T-complex protein 1 subunit alpha; TAIR: AT3G20050.1 T-complex protein 1 alpha subunit; Swiss-Prot: sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha; TrEMBL-Plants: tr|A0A0L9TJL4|A0A0L9TJL4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76329858..76336851) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCGGTGAACACGCAAACCCCTGACATCTCCGGCGAGCGACAATCCGGCCAGGACGTTCGCACCCAAAACGGTTGCTC CTCCCTCTCCCTCTCCCTCTCTCTCTCGCTCATTCTTCCGCCGTATCTAACCGCCATTTCTATCTAACATGCTTTCTCTG TGAACGCAGTGGTGGCGTGCCAAGCCGTCGCTAACATCGTCAAAACCTCACTAGGCCCCGTTGGCCTTGACAAGGTGAGA TCCGTCTTCTCTCTCACTCTTTCTCTCTCACATTCGTTGATCTGGTTTCATTTCCTGTGTTTCTTCGCGTTTCAGATGCT TGTTGATGATATCGGCGATGTCACCATCACTAACGACGGCGCTACCATACTCAGGATGTTGGAGGTTGAGCATCCCGCCG CTAAGGTGAACGGAACTTGCCTCATTTGTCGCGGTTGCGTTCGCATCTTCACGCACGTTCGATGTTACTGACTCTGTGTT TGGGTTTTCTTTTTGTTTAGGTTTTGGTGGAATTGGCTGAGCTTCAGGACAGGGAGGTTGGAGATGGCACCACTTCAGTT GTTATTGTAGCTGCTGAGCTTCTCAAAGTAACTTCAATGCTTGTCAATTTCTACATCATTTACTTGCATTTCATCTCACC AATTCATGTATATAACATTTCCTGTTTTTTTGGGTGCAGAGAGCAAATGACCTTGTGAGGAATAAGATCCATCCAACCTC AATTATCAGTGGATATAGAGTGAGTCAATTATTTGTTTTTAATTTTATGTAATTTTTCTAGGCAATTTTTCTGGTGTATG AATTGGGAATTTGCATTAAAACCTTATTTTTAACTTCTCTTCATGTTGATTTCTGTGGATAGCTTGCGATGCGAGAAGCT TGTAAATACATTGATGAAAAACTTGCTGTCAAGGTAAGAACCTCTTAATAACTATTTCTATATTATGTTTTTGTAAGCTT TACTATTTTCAATCTTCTATGCCACTCTATATTAATGCTATTGCTGACTTACATGAAAGCTAAAGATGTTGCTAAAAAAA ATACCACACTACTCTGATATGCTTATTGTTATAGTTTTGTATGTTGCATCAATTTTAAAATCATTAAGTAATGCAGAAAG AAGCTAATGATGTGATAAGTATTGATTGGACTTTGGTCCATCTCTTATTCTATGAGTAACTTGCTACGAGTCAATTGGCC ATTGTCTGTCTGAAGATTAATGCATTTGCAAATTATGTTGCATGATATATGTTTCTTAATTAGATTGTGTTCTCTTGACT TATAGGTTGATAAACTGGGAAAGGATTCACTTGTAAACTGTGCCAAGACCAGCATGTCCTCAAAGTTGATAGCTGGTGAC AGTGACTTCTTTGCCAATATGGTAATTGCCATGACTTTACTGGATGTTGAAAGTTCATATTGCCTGAAATTGATGCAAAC CATATTTTGGGGGCCAACTTTAATTGGTTGCCTACACCTTTCCGTTTCTTGTCCCAAATATGTGTGTATTATTTTTACTT ATAACATAGCTTTTTACTGTATTTTACTTTCTGCTCGAGAATAAAAACATTTAAATATTTTATTGGTTTAGTTATGGTTT CCAATTTTTGTATGTTGAACGTGTGTAGTTGTTTATCAAATTGTTCAACTATCTTCTGAAAGATTCTTAAATTATCCTAT TAATGATAGTTCTTAGGTATAATACTATGTTAGTTCTGTTTCATATCATACTTTAGAGGCTGACATTGCCATTCGTTGGC TAGTATAATTCAGATTTTGCATTAACTTCTTCTATGGTTCATTTGAAAATATTTGGTTACAAGCCATTGGTAATGATTAC TAAATATCAAAGGTTCAACTCTGGTGCAAATCTAATTTGCGCTGACATCTCTTATTGCTTCCTTCTTTTGTTATCTGAAA TGATAGAGCAATTGAAAATAATAATTGGCCAGGCAGTGAGTGATGCCACTGGAAACTGTGCAATAAAAACTCCTTTCATT ATTCTGAGAATGTTCTTAAAATCAATCCAAATGATGTCAATGTTAGTAAGACATTGAAAGTTTTCAGACTCTGCTTCATT AAAATTTAGAAGTTCAAAACCTTGATGGAAAGTAATGAATGTTTTGTGGTTCATCATATCATTGTTTGATTGAAGCGAGT TAATTAGTTGATAAATTTTTGATCTTCGTGTTGAATTTGATGGTCACAGTTTCAATTTTGGGGTTATGGTCCATGTAATT TTCGAATGCTAACTGTTGTTTCTGAATGAGTTTATTTGGCTGTATGCACTGCAGATAGGTACTCATATTGTGTCTGTAAT GAAACTGGTTTTTATGTGCAATTTATACAGGTTGTAGATGCAGTGCAGGCTGTAAAGATGACCAATGCTCGGGGTGAAGT TAAATACCCAATTAAGGTTGGTAGTGGAATTCCTCTTATCTGTTTCTCATGAGGTTTTCTTACTGGATGAGAGATAGCAA CTCTGAGCAATATGTTGAATATCTAATATTATATCCATTGTAAATCTTGCTTCTTATGCGCTTTAACAATCGGACTTTTG ATGGATTTAATTCTGTTTCATTACCTTCCATGTCACAGGGAATCAATATATTGAAGGCTCATGGAAAAAGTGCTAGAGAC AGCTTTCTGATGAATGGTTATGCTCTAAATACTGGCCGTGCTGCTCAAGGAATGCCTCTTAGGGTTGCCCCTGCAAAAAT TGCTTGTCTTGATTTCAATCTTCAGAGGACAAAAATGCAATTGGGTGTTCAAGTATTAGTCACTGACCCCAGGGAGCTTG AGAAAATTCGTCAAAGGTATTGTCAATGCAATCATATGACTTCTATATTATTATGAGACCTTCGTAAATTAACATACCCT TAAATATAATGAGAATAATTTCATTATTATTATTGGAAGTAATCTGTGAAAGATAGGCATAGAACGGAATTATTCTGCAT GATAACTATGAAGTTACTCATTAGCGCAGCTTGTAATATTATGGTTAATAATCTAATTGTGTAATTGTTATTGGTTTTCT GTATATTTATGCAACATTGTAATCTCATCTCGTGTTGTTTCATTGTTGAAATTTTATTGTGCTTGGTTTAGGACTATTCA CCACCCTTATCATCTGCATGACAAAGTGATATCTGGAATAAATTTTAACAAATGATATTTTTCCCCCTAATTGCAGAGAG GCTGATGTGACTAAGGAACGTATTGAAAAGCTACTGAAAGCTGGAGCCAATGTTGTTTTGACTACTAAAGGGATTGATGA CATGGCACTTAAGGTATTTTTCTTCCTACTTTTTGGCACTTTTTTTTTTATAATGATCTTTATCTTTGAGCTAGAGGATT TAGTTATAGTTTTTCATGTGGGCATCCAAATAAAATATGACTTTATCTTTCGATATCATCTGTTGATTGTTTAGCATGTT ATCCTCTTTTTCTCATACTGTAAAATTGGTAATCTTGACATCTGGTCTAATAGATGAAGTAAACTGTACTCTATAGCAGT TGAATCAAGTACATTCAAGTTAAAATGTTTAACTTGAAATCACACCAAACTTGTGACATCTATGGATCTTTATGTGGCTT CCAATTTTCTGCTTCCTGCATGAATAGATGTCTTGGGTCTAATTGATGGACTGTGCTTCCATGTTTAAATTACATGTTTT GTTTCTTATGACTGGTACAAAGGATCATGAATATAACAATTAAGTGTTTCTTTCTTACTATTTATTTCTTGTTTCAGTAC TTTGTTGAGGCTGGGGCAATTGCTGTTAGACGTGTGCGGAAGGAGGACATGCGACATGTTGCCAAAGCAACTGGTGCAAC ATTGGTAGGCTTTTGTTTAATTTAAATGATTTAAACTGCAATGAAGTACATTGGCACTTGATAGTAAACTGAATTTCACT GACACTCCAAATTTTATGTTAATCCATCTTTTCTTCTTTCTAATTTCTAAACTTCCCTTATACTCGAGTAGTTGAATAAA TCATTGTTGATATTCGTATGAGTTGTGGAAGTACTATACATGGCTGTGGTTCCATGCTTTATAATTTTTAAGTACTGGTG ATTCTGAATTCCATCAGTCTAGATTATCTAGAATAGTAGTCTTTTGAAGTGTTTTCCATTCTAGAAACCTTTTGGCATTC TGAAATCTGAATATTGAATAACGGGAGCTAATCCTGTATTGCTAATATTTCACAGGGCCATGTTATGTTAACATTTTGTA TGTATCTCTTCCCTGAATTTTATAATGCTTGTGTTTATTGATTGGTAGGATGTGGGAAGTGGCTGAGGTGGTATTCACTT GGGTTGTTAAGAGATAATTTTACTATATAAGTATATATTCAAATATTATCCATATTACTTTCCATGTCACTTTTGATTTA AACTTTGATGCCGTTTACTGGAATGATGTATCCATTCATATTAAAGAATCTAAAGAGACCGTACAAAAGCTGTCCAAGTG TCTGTCTAATCTTTCTCTCACAACTTCTCTCTCTGTTGTGTCAATTCGAACCATGCAGCTTTCTCACTTCCCTTTTATAT TAAACCATCTTTGTTTGTTAAAGATGTATTTATGGGCTTTTTTGTCATGCAACAACTGTGTCTTTGTTTAGCATACTATT TCACCGTCAGACTTCATTTTTACCGTGATTATTTGTCACAGGTTTCAACATTTGCTGATATGGAAGGGGAGGAGACTTTT GAACCATCATTTCTTGGAACTGCAGAAGAGGTTGTTGAAGAGCGTATATCTGACGATGCTGTAATTATGATCAAAGGGAC CAAAACTTCGGGTGCAGTAAGTAGCTGACGTAGAACTTTTTGGCTGTTTTTGATAATAAAATGCATTAAACTAATAAAAA ATGTACAAGGAATTTGGAGGAGCAAGAAATTTCCATAGCTGAAAAAGGGAAAACTAAGAACAGATAAACTGATAAAGCAT CAATGCAGTCAAACTGTCCAAACCGTTGCATATCTGTAAAGATCTCCCATAAAATGACCAGACCATATGTTTAATACCAA ATTTAAGCCAATTGTATAATTGATGAACACTTTAGATTTCTGGGCACACATGCTTTCTCATACCATTGCAGATGCAGGGA AATTGCAATTTAAAAAAAATGATTCAAAAAATACAAATGACGAAAAGGATAGTAGCATTTCCCTAGCACTGTAATGCTGA ACTTTCACAAAAAGAATCCACTAAATACATTGAGCTAGCTAAAAGATTCCTAAAGGGGGCACAACTGTGGAGGTAGGCTT ACATATTTGAAGGGGTGTAGACGTGTAGTTGTCATTTGCTTCATTTTGGAAAAGAGAAGTACAAAATCATTGATCTGCTT GTACTTTAGATGCACTTTCTTTGTTGGCTTGCTGCCATAGCAGCTAAGTTGTATGAAATGAATTGGATAAATATTTTTAT CTTGATAGAATTATTCAGTGGAAAAAATATCAATCAGACCAAAAAATGATTTCAACTCGATATTCCCACATCATATAAGG TACAAATAAGTGGACGTTATAAAACGGTGGAGTTAGAGGAAAAAAAGACGATGATGATTCCTGAAAATATGGTGATAATG AGTATAAATTTGTTTTGTATTGTTTGGGCCTTTGAGGTGCACACCTGCATATTGTAGATAATATAAATTGTTGCCTGATT TTCTGTATTTCTATAGGTTTCATTGGTTCTCAGAGGTGCAAATGACTATATGCTAGATGAGATGGACAGAGCTCTGCATG ATGCGTTATCAATTGTTAAGAGAACTCTAGAATCAAATACGGTAATATTCTTTTTATCTAGGGCACAGTCCCTCTCTGCC TATTCACTACTGATTTCTCAATAAATAAAATGCAGGTTGTAGCTGGTGGAGGTGCTGTTGAATCAGCATTGTCAGTTTAT TTGGAGTACCTTGCTACAACTTTAGGATCCCGGGAGCAGTTGGCTATAGCAGAGTTTGCTGAGTCTTTGTTAATCATTCC AAAGGTAAGAGCCAAACCAACTTAACAGTTTAGGTTTAATTTTTAGATTTTATGCTTATTTACATGTGATTATGGGTGGC ATGGCCTAGCTGAACAATTGATGTTAAGTTTGGTCTTCAATCTCAGTTCAATAATTAAAATTTTAGTATATAGTTTTTTT GTAGTTTCTACACAAGATAGTTGATTACTTTGTGGGCTTTCGTGTGGGGTTAATGGATGTGAACAGTAACTTTGTGGCCC ATTATTTAACATTAGCTGCTTCACCTTTGTGTTGATTGTTCTTTATTAAATAAGTTCTTATTTCCTTTCTAGCACTAATA ATGAGTATGTTGGGACATTATCTGGTGCAGGTGCTTTCTGTCAATGCTGCTAAGGATGCTACTGAGCTGGTTGCAAAATT ACGGGCCTACCACCACTCAGCACAAACTAAAGCTGATAAGAAACATTTATCAAGGTATTTATTTACTAGTAAATAGTCAC TTGTATATTAACTTCGTTACTGTCTTCTTCTGAGGTTTATGGTAATATTTCTGGGTTTGATTAGAGATTCAACTATTATT TCATTATTGGAATTCATTAACAGAAATTAGTGGCACGTGACAGTTGAAGAGGAAACATATTAAGCGATGATGGATAATCT AAATTTAATTGTGCATGACCACACAATTACTGTTCTAAGTCTAGCTTGCCCACATTCTTTTCTGTTCCACTAATATAATT GTTTGCTCTTATTTTTTTAGCATGGGCTTGGATCTTTCAGAAGGAAAAATTAGAAACAACTTGGAGGCTGGAGTCATTGA GCCTGCAATGAGCAAAGTCAAGATTATTCAGGTGCGTATTTAGTAAATATTATCATCCGCTGTTGACTTCGATGACAGTT GTCTAAGAACGTTTCCCTGCTATTTATCAGTTTGCTACTGAAGCTGCTATTACTATCCTTCGAATTGATGACATGATCAA GCTTGTCAAGGATGATGGTCAAGAAGAGGATTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0384900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGTGAACACGCAAACCCCTGACATCTCCGGCGAGCGACAATCCGGCCAGGACGTTCGCACCCAAAACGTGGTGGC GTGCCAAGCCGTCGCTAACATCGTCAAAACCTCACTAGGCCCCGTTGGCCTTGACAAGATGCTTGTTGATGATATCGGCG ATGTCACCATCACTAACGACGGCGCTACCATACTCAGGATGTTGGAGGTTGAGCATCCCGCCGCTAAGGTTTTGGTGGAA TTGGCTGAGCTTCAGGACAGGGAGGTTGGAGATGGCACCACTTCAGTTGTTATTGTAGCTGCTGAGCTTCTCAAAAGAGC AAATGACCTTGTGAGGAATAAGATCCATCCAACCTCAATTATCAGTGGATATAGAGTTGATAAACTGGGAAAGGATTCAC TTGTAAACTGTGCCAAGACCAGCATGTCCTCAAAGTTGATAGCTGGTGACAGTGACTTCTTTGCCAATATGTTTCAATTT TGGGGTTATGGTCCATATAGGTACTCATATTGTGTCTGTAATGAAACTGGTTTTTATGTGCAATTTATACAGGTTGTAGA TGCAGTGCAGGCTGTAAAGATGACCAATGCTCGGGGTGAAGTTAAATACCCAATTAAGGGAATCAATATATTGAAGGCTC ATGGAAAAAGTGCTAGAGACAGCTTTCTGATGAATGGTTATGCTCTAAATACTGGCCGTGCTGCTCAAGGAATGCCTCTT AGGGTTGCCCCTGCAAAAATTGCTTGTCTTGATTTCAATCTTCAGAGGACAAAAATGCAATTGGGTGTTCAAGTATTAGT CACTGACCCCAGGGAGCTTGAGAAAATTCGTCAAAGAGAGGCTGATGTGACTAAGGAACGTATTGAAAAGCTACTGAAAG CTGGAGCCAATGTTGTTTTGACTACTAAAGGGATTGATGACATGGCACTTAAGTACTTTGTTGAGGCTGGGGCAATTGCT GTTAGACGTGTGCGGAAGGAGGACATGCGACATGTTGCCAAAGCAACTGGTGCAACATTGGTTTCAACATTTGCTGATAT GGAAGGGGAGGAGACTTTTGAACCATCATTTCTTGGAACTGCAGAAGAGGTTGTTGAAGAGCGTATATCTGACGATGCTG TAATTATGATCAAAGGGACCAAAACTTCGGGTGCAGTTTCATTGGTTCTCAGAGGTGCAAATGACTATATGCTAGATGAG ATGGACAGAGCTCTGCATGATGCGTTATCAATTGTTAAGAGAACTCTAGAATCAAATACGGTTGTAGCTGGTGGAGGTGC TGTTGAATCAGCATTGTCAGTTTATTTGGAGTACCTTGCTACAACTTTAGGATCCCGGGAGCAGTTGGCTATAGCAGAGT TTGCTGAGTCTTTGTTAATCATTCCAAAGGTGCTTTCTGTCAATGCTGCTAAGGATGCTACTGAGCTGGTTGCAAAATTA CGGGCCTACCACCACTCAGCACAAACTAAAGCTGATAAGAAACATTTATCAAGCATGGGCTTGGATCTTTCAGAAGGAAA AATTAGAAACAACTTGGAGGCTGGAGTCATTGAGCCTGCAATGAGCAAAGTCAAGATTATTCAGTTTGCTACTGAAGCTG CTATTACTATCCTTCGAATTGATGACATGATCAAGCTTGTCAAGGATGATGGTCAAGAAGAGGATTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0384900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVNTQTPDISGERQSGQDVRTQNVVACQAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVE LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRVDKLGKDSLVNCAKTSMSSKLIAGDSDFFANMFQF WGYGPYRYSYCVCNETGFYVQFIQVVDAVQAVKMTNARGEVKYPIKGINILKAHGKSARDSFLMNGYALNTGRAAQGMPL RVAPAKIACLDFNLQRTKMQLGVQVLVTDPRELEKIRQREADVTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIA VRRVRKEDMRHVAKATGATLVSTFADMEGEETFEPSFLGTAEEVVEERISDDAVIMIKGTKTSGAVSLVLRGANDYMLDE MDRALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKL RAYHHSAQTKADKKHLSSMGLDLSEGKIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDDGQEED
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.560.10
2 157 156 2.3E-53
IPR027413
PANTHER
PTHR11353:SF193
6 157 152 1.2E-287 –
PANTHER
PTHR11353
6 157 152 1.2E-287 –
CDD
cd03335
12 548 537 0.0
IPR012715
SUPERFAMILY
SSF48592
13 545 533 1.01E-78
IPR027413
Pfam
PF00118
31 157 127 5.8E-42
IPR002423
PRINTS
PR00304
33 49 17 1.4E-29
IPR017998
ProSitePatterns
PS00750
36 48 13 -
IPR002194
PRINTS
PR00304
55 73 19 1.4E-29
IPR017998
ProSitePatterns
PS00751
57 73 17 -
IPR002194
ProSitePatterns
PS00995
85 93 9 -
IPR002194
PRINTS
PR00304
85 104 20 1.4E-29
IPR017998
PANTHER
PTHR11353:SF193
184 548 365 1.2E-287 –
PANTHER
PTHR11353
184 548 365 1.2E-287 –
Gene3D
G3DSA:3.30.260.10
185 419 235 9.1E-109
IPR027410
SUPERFAMILY
SSF54849
185 419 235 2.72E-18
IPR027410
Pfam
PF00118
185 546 362 1.3E-92
IPR002423
SUPERFAMILY
SSF52029
220 392 173 7.33E-46
IPR027409
Gene3D
G3DSA:3.50.7.10
225 383 159 9.1E-109
IPR027409
PRINTS
PR00304
387 409 23 1.4E-29
IPR017998
Gene3D
G3DSA:1.10.560.10
420 545 126 9.1E-109
IPR027413
PRINTS
PR00304
421 433 13 1.4E-29
IPR017998

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0384900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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