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LotjaGi4g1v0386400.2

Overview

Field Value
Gene ID LotjaGi4g1v0386400
Transcript ID LotjaGi4g1v0386400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT5G56460.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FM85|PBL16_ARATH Probable serine/threonine-protein kinase PBL16; TrEMBL-Plants: tr|A0A0L9TKV6|A0A0L9TKV6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0386400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76458874..76462940) extracted from Lotus japonicus Gifu genome v1.2.

TTACAAAACCAGGTAAATCAGGAAAACTGATCTAAAAGTCATTTCTCTTATTGATGCATCAAAAGAACAAAACCAGGTAA TCAAACAAAGGCATGATGATAGTAAGTTACCATCCAACCCTGAAGAAGTAGAAGACCTTCGCCGCGATTCAGCAGCAAAT CCATTGATTGCATTCACTTATGATGAGCTAAAGCTGATCACTGGAAATTTTAGGCCAGATCGTGTGTTGGGAGGAGGAGG ATTTGGAAGTGTTTATAAAGGTTTTATTTCTGAGGTGTTAAGACAGGGGCTTCCTTCTGTTGCTGTTGCTGTTAAGGTTC ATGATGGTGACAACAGTCATCAAGGCCACAGAGAATGGCTGGTATATATCTACAATTTATATTGTTGAAATCTATTTCGG ACTCAACTTTTTGCTGTTGAATTTTCCTAAATTCATTGCATTGCAGACAAAGCTATTAAAATTATCTGACCAGAATTAAA AATTTGACATCAAATATACAACGAGTTTTGTTACATATAGGTTGTTTGATCATTTGATCTAATCAGTGTGAAGCTCTGAC CGCATCAAATTTAGGAAACTTAGATTGTAGGAAATCCAAATTCATTTTCATTGTATTAATTTGGGGTGTCTCAAGGTGTT TACTAATCATTATTGTTTATGAAATCATGTTACTGACAATTCATGATGATGTAACTAAAAAATGATACATTGGTTATAGA AGTTTTGTAAGATTTATTGAGATTTCCATTGCTTTCTAGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCT AGTGAAATTAATTGGATATTGCTGTGAAGATGAGCATAGGGTGCTAATATATGAGTACATGGCCCGGGGAAGTGTGGAGC ACAATTTGTTCTCAAGTAAGTATATTATGTCACCTTTTATGAATATTGAAATTCTGCACACTCTTATTGATATTACAAGC TTGGACATTACTGGGACATGTTTATTAAGATGCCATCAATAATGCATCTAACCATGGCTAGCAAGGAATTTAAACAATGT CTAGAAGGATGCCACTTGATTTTTTAGATGCATCTCACCTTATTGCCTTGTCTAGGTTGTCTACAACAATGTTGACCCTT GGACATATAAAGTGACTTTATTCCATTTTTAAAGTTTCTACTTTCTAGAATAATGCCAAAGTTAGAAAAGTAGGTGAAGC CATTCAACCCTGGTCTTTGATACTTCATTAAGAAATGTGATTTGGATGGGTTTGATGAGGATATAAACATGTGTGACGGA AACTAAAAGGAACAAGCTGGTTATATGATACATTTACACTAACTCTTTTTCAATTCATCAATTCATCAATTTTCTTTTTC TTTTTATATCCTATTAGATATCATATATCTTCTATCTTATATTCTTATCTCTATTTAAGTGTGAGTAAAATTAGAGTGTG AAGAAATTATTTTCCTATAAAATATGACAAAATAAATCTACAACCTTTACTAATCATATATGATATCAATGTAAAAGATA CTGGATCAGAATTCCTTCACAATTTGAGAAAGTTAGTGAAATTAAAATGAAGAAAAAACTGAGATGTGAATCAATAAAAA CTCTTTTATTTTTGGTGTTTAATAGAAAAAAAAATCTGCAATGGTTAGACCGACGGTTAAATTCGTCCCTTTTAGAGTTC AACCTCTTTAAAATTTGATTATGCAAGGTGAGTCAGAATAAGCTGAAGGGTAAGGAATCCTGTCTCATTTTAGTGGATTG ACGAGTTGACCCGATAGCCTAGATTAGACTTGTTTGCCAATCTTAATTACTTAAATAAAAATATAAAGAAAATTATGAGA GTAATGGGAAAAATGATGATAAATAATGTGGTAATTTAAGAGTGTTTACAAAATTATTTCAAACTCAAAATGAGCTCAAT TACTTTAACTAAACTCAACATGGAGTCTCTCAAGACGAGATCCACTTTATTCATCTACCTAATTAATTTCATTTTACTCT ACCCGATTTTAAAACAATCAAGCATTAACTAAACTCAACATTTGTCTAAATGATATGATATGATACTACTCCATTAACCT TTTTTTTTGAGTGACTGCTCCAAGGACTTGAGCTTGGTCAAATGGGTCAAAATGGTTTCTCTTCATTTTTGTTGCTCAGC CCACTGATCGAGTTGTTCACGTTGGCCCATTATGTATAAAAAATCATGTGTTCCTTGGTCAATTTGCCTGTTTACTTTTT GTTGTTCCATGATCTATTCTAATGTGTGTTTACTTAAATATTGCAGAAATTTTGCTTCCCTTGCCATGGTCCATAAGAAT GAAGATTGCATTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAAAAACCTGTCATCTACCGTGATTTTAAGA CATCAAATATCTTACTAGACCAGGTCAGTAATACATGTTATTTTTATATAGCATCAAATAGCATAAATGTTAGTTTTAAT CCTGAACACCAAAGGCTACAAACTAGAGCTGGGTACGCGGGTGGACCGCCCCGCACAAGCCCGCCCCGCGTTGGCTCGCC CCGCGTAGGCCCACATTTTAGCGGTCCTCTATTTTTCGGGCTATAGTCCGCACTAGTCCGCGGTTTCGCGGGCCGATCCG CGGGCTTTGACCTCCCTCACCCCCTTTTTGCCCTAGTAGGCCCGCCCCGCATTGACCCACCCCGCGTAGGCCCGCATTTT AACGGTCCTCTATTTTCCGGTCTATAGCCCGCACTAGTCCGCGGTCTCGCGGGCCGGCCCGCGGACTTCGACCCGCTTAC CCAACTCTACTACAAACTTTCCAAAATAAGCTTGCTTTTAACTAACCGTCTTTGTTTTTTTACATGTTTCAAAAACAGGA CTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAGTTGGAGACAAATCCCATGTTTCTACTCGAATAA TGGGAACATATGGCTATGCTGCACCTGAATACATTATGACAGGTAGAGTAACTTCAGAAGCTGGAATTCAACACTCATCT ATACAAAAATATTCAAATGTGACCCAACTATCTCAGAATCTTCAAGACACATTGACTATTTCATATTATTAGTCTAACAC GCCTCTCCATTGCCCTTAATATGTTGAACAACCATGATGCAAATTCATTACCGCCTAGGGCATATCCATGATTTATTCGA TGGGAGCGGAATAAAAATATAAAAACGCTAGTTTTATTTTGGGTCAGACTAAGAATAAAAAAAATTCTATATAAAAGTAC ATATAGTCGGCAAAGAAATTAAAATTTTTGGGGTTGTGACCCCTATCGGTCTCTTAGATATGCCCCTGATAACATGTCAA TAAGCAACACTCGATCAAGAGCTTAATTTGTGTTACATGAAGACACTCTACAAAAAATGTTAAGATGAGATTTCAATTTG ACTAGAGATAGAGACCACTAAAAGACACATTATAGCAATTATGATGTCATATACATATATGAATTGTTACTTAGCCGCCC GAACAATGTACATACTATATTTTTGTTTTTATATCTCACTTCTTATTATATCTATCACATATTACATTTATTTTTGTGTG TTCTTTTCCTTTCTCAAGTCTGTGCAATATGCTACCAATTATTTTCGACATGAATTGGCATTATAGTTATCTATTTTGCA GGTCATCTTACCCCTAGAAGCGATGTTTACAGTTTTGGTGTTGTTCTCCTTGAGCTTCTCACGGGAAGAAAATCACTAGA CAAGCTAAGACCTGCCAGAGAACAGAACCTCACAGAATGGGCACTTCCATTGCTGAAGGAAAAGAAAAAAGTACAAAACA TTATAGATCCAAGGTTAGAAGGTCATTATCCAGAAAAAGGATTTCACAAAGCTGCAATGCTTGCATATCATTGCTTGAAC AAAAATCCAAAAGCAAGGCCTCTCATGAGAGACATTGTGGATTCATTGGAGCCTTTGACAACATACAGTGAGGTTTCTAT TGAGAAAACATTGACCATAGTCGGTGAGGTTCCAGAAGCTGAATTGAAAAAGAAAGATGAAAAATGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0386400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCCGGGGAAGTGTGGAGCACAATTTGTTCTCAAAAATTTTGCTTCCCTTGCCATGGTCCATAAGAATGAAGATTGC ATTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAAAAACCTGTCATCTACCGTGATTTTAAGACATCAAATA TCTTACTAGACCAGGACTATAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAGTTGGAGACAAATCCCAT GTTTCTACTCGAATAATGGGAACATATGGCTATGCTGCACCTGAATACATTATGACAGGTCATCTTACCCCTAGAAGCGA TGTTTACAGTTTTGGTGTTGTTCTCCTTGAGCTTCTCACGGGAAGAAAATCACTAGACAAGCTAAGACCTGCCAGAGAAC AGAACCTCACAGAATGGGCACTTCCATTGCTGAAGGAAAAGAAAAAAGTACAAAACATTATAGATCCAAGGTTAGAAGGT CATTATCCAGAAAAAGGATTTCACAAAGCTGCAATGCTTGCATATCATTGCTTGAACAAAAATCCAAAAGCAAGGCCTCT CATGAGAGACATTGTGGATTCATTGGAGCCTTTGACAACATACAGTGAGGTTTCTATTGAGAAAACATTGACCATAGTCG GTGAGGTTCCAGAAGCTGAATTGAAAAAGAAAGATGAAAAATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0386400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MARGSVEHNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQDYNAKLSDFGLAKDGPVGDKSH VSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLTEWALPLLKEKKKVQNIIDPRLEG HYPEKGFHKAAMLAYHCLNKNPKARPLMRDIVDSLEPLTTYSEVSIEKTLTIVGEVPEAELKKKDEK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF46
1 208 208 8.4E-127 –
Gene3D
G3DSA:1.10.510.10
1 214 214 2.6E-59 –
PANTHER
PTHR45621
1 208 208 8.4E-127 –
ProSiteProfiles
PS50011
1 199 199 25.517
IPR000719
SUPERFAMILY
SSF56112
3 195 193 1.48E-50
IPR011009
Pfam
PF00069
25 193 169 1.6E-28
IPR000719
ProSitePatterns
PS00108
44 56 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0386400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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