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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0390300 |
| Transcript ID | LotjaGi4g1v0390300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cationic amino acid transporter-like protein; TAIR: AT4G21120.1 amino acid transporter 1; Swiss-Prot: sp|Q84MA5|CAAT1_ARATH Cationic amino acid transporter 1; TrEMBL-Plants: tr|K7L6C1|K7L6C1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0390300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76884087..76888263) extracted from Lotus japonicus Gifu genome v1.2.
ATTGATCATAGCAGGATGGTTGACGGCGGCCTGGAAAAGCGGCGAGGATGCACGTTCCGGCGAAACGACTTCTTCCCGGA GGAGTCATTCAAGAGCTGGGGAAACTACAAAAGCGCGATCACGTCGACGCCGGCGAGGCTGAAGGATCGTGCCATGAACC GATCCAGTGATCAAACGGAGCTGGTTGAGATCAAGTCTAGGAGCAACGTTGAAATGAAGAAGACTCTCAATTGGTGGGAC CTTATTTGGTTCGGGATCGGCGCCGTCATCGGCTCGGGCATCTTTGTCCTCACTGGACTTGAGGCCCGAGACCATGCTGG CCCCGCCGTCGTGTTATCGTTTGTTGTCTCCGGTGTCTCCGCTTTGTTCTCGGTGTTTTGCTACACCGAGTTCGCTGTGG AAATTCCTGTTGCAGGTTCGGTTTCTCACTCTCTATATTTGGATATTTTTCTTCAATGGTAAAAATGTGAAAATTCGGAT ATTCAAGAATCTGGATATTCAAGATTCTGAATGAATCTGCGTCCTTTTGACAAGCATCTTAGGTTTTTCATGTTAGTTTT GCACCTTTTACTTTTTGTTAATAATTCTTTCCCTAAAATTCACAAACAAAATCTAAATAGGCTCCCTCACTTTCTCCTTG TTCTTGTGATTGTTTGAATAACACCTCCTTTTCTTCATGTATTTTTGACTCAACTATGTGATTCAGATAGTACATACTTA ATTTCAATCAAATAATATATTTAGACTAAAACGTCTTAATTTATGAAAAACCCGTCAACAAAAACTAATTGAGAAAGCAC GTTGAATCCAATGTGAAAGAAGCTCTAATGGAAGGTTGGCATTGGATTGATCTCAATTGGAAGTCAAAACATAGGTTAAA GTGTGAGCAACTCTGAGGGTGAGTCTAAAGTGTGTTTGGTTGTCCGCTAAACAAATATACATAATGCGACCACTTAAGAA AAAAAAAAGTATTAAATCGATGCTCTTAATTAATATTATTTAAACTCAATTAATATTGTTGAATTAATTTTGGGAAAAAA TATTAGAGGATCTCTCATTAGAGTTTTTACAATAGAGTTAATGACTTTGCACTCTTTTTAGTATGTTGACTTCTCCTCAC GTACGGGTTGTTGACTTTAAGTGACAACCTTAACTTGCTGGAAATGAAGTAGTTAAGCTGTAATGTAGTGTCTATCTTTA TGAGAGGGATATTCTTTGATGCATGAGTTCAGGGCGAAGAATTTTCTTCCTCTTTTAGTCATCTAATATTCTCAACGCAC AAGACCCACACACGCAATTGATACTAAGAAAACAGCATGTATACCAATTGGAGTATAATGTCAGACTCAGAGCTGAAAAA CTTCAGCACACAAAAAGATAAAACGTGGTAGAAAATTCAAACAATCTGGATGCATCAGTTTAAAAAATTGTAAAAAAATT TCAAATTTCAAATTCAAGGGATATTAAAGATAAAGATTATAAATCTGTCTTCAACGAAATAAATGAGAAAGACCATAATC GGTGACCGACTAGCAAAGGAAAGCAAACGCAAAACGTCAACCCCAATCAAGTCTAAAATAATTAAGAATGATGTGCTTAT TTGACAATATGTGCTGAAAATAAACTTTAGAATAGAATAGTAAAACATACAAATTGAAAATAGAAACTAAACATGTAAAA TTGAATAGGTTTATACTTGAGTGTTTTTTAAATGGTAATATTAATGAGATGAAATGTTAAAATAATAAATATTTCATTAA TCATGCAATCGTCGTTAATAAATTTGTTTATTTTTCTGTTCTGCCACTGTTTTTTTATGATTTTTTTTGGTTATAAAATG TTTCTGTTATTATTTTTTTCTTTCTAGAATCAATCAATTTGAAATCGCTCTGTTAATAGAAAGCAACTAATAAACGAATA AACCATTCACCGAACAAAGTTTCGAATATTTGAACACAATAATGGTGAGTGTGATTAAATGTAAAGAGACAAACAACAAC TAATTACTAGTATATATATTGTATGGAGTCAAAGAGTTTGGCCTAAATAAATAAAATAAATTAAGCAACTCCTATAGATA GATAGTGACGAGTTCGCCTCACGCAATCCATGTGACCACGTCTTTCGCCGCTCTTGCTAATTATATATCATCATATATAA CACATTACACACTTGCCGGCCTTGCTAATTTTAATAAATCACTACTAGCTAGTTGTAGCGTGCATTCTTGGTTGAAACTT CAACTTCAATTTCTCATAATTATTAATATTTCCTGCAATGCATGCATTAACTAGTCAAAATGGATGTGGCATGGGGGGTG CATTATTGTAACCCTGAGAAAGATGCATACACAATTACACAACACTATGACTATGTGTCCCGATAATAATATATCCACGT TCCAATTCTATTCCGTCTACCTTTATATTGATGTCGTTGTAATGTAAATGTGATTTTATAGAATATTTTAACATATTAAT ATTTATGTAAATTGGAGAACTAATGTTTTGTAATGTTAGTGTCGATTTAGAGTCACGTTGAGTTAGGAAAATGTTTGATT TACCACCAAGTGACTATATACCTCTTGAGAGAAACAAAAAAATAGAGTAATAATAAATGATGTGATCGATATATTTTTTT TTGATAAGCCATATAATATATAAAGATGTGATTGATATATGATATGATAGATAAAAGAATGATAGTAGAAAGAAAAAGTA AATATTTAATTGATGTTTTGTATTATTAGTGGTTTATGTATACTTATTATTGAATTTTCACTTTTTCTTTTCAGGTGGGT CATTTGCGTACTTAAGAGTAGAGCTAGGAGACTTCGTGGCCTACATAGCCGCCGGAAACATTCTCCTGGAGTACGTAATA GGCGGCGCCGCCGTGGCTCGGTCATGGACCTCCTATTTTGCCACCCTCTGCGACAAAAAACCCGACGACTTCCGGATAAT AGTGGACAGCATGGGCGATGACTACGGCCACCTCGACCCAGTGGCCATCGGTGTCCTCATTGCCATCACCGTCCTCGCCG TGTACAGCACCAAAGGCTCCTCCATCTTCAACTATGTCGCCTCCGTCTTCCACATGGTGGTCATTATCTTCATCATCATC GCCGGCCTCATCAACGCCAAGACCGAAAACTACTCCGAATTCACCCCTAATGGCGTCCGAGGCATATTCAAAGCCTCCTC CGTCCTCTTCTTCGCCTACGTCGGTTTCGACGCAGTGTCAACTATGGCCGAGGAAACAAAGAACCCCGCCAGAGACATTC CGATAGGACTTGTGGGGTCAATGGTGATCACAACGACGGCGTATTGCTTGCTCTCAGCAACGCTCTGCCTCATGCAGAAC TACAAGGAGATCGACAAGAACGCCCCGTTTTCTGTTGCATTTAGTTCGGTCGGATGGGATTGGGCGAAGTACATTGTTGC CTTGGGCGCGCTCAAGGGGATGACAACTGTTTTGTTGGTGAGCGCTGTGGGTCAGGCTCGTTACCTGACCCACATTGCGC GCACCCACATGATGCCTCCTTGGTTCGCTCAAGTTGATGAGCGGACCGGGACACCAATGAATGCTACCATCTCAATGCTC GGGGCAACCGCAGTGATTGCTTTCTTTACCGATCTCAGCATTCTCTCTAATCTCTTATCAATTTCCACTCTTTTCATCTT CATGCTTGTGGCGGTTGCCCTTTTGGTTCGCCGCTACTATTCAAGCGGAGAGACCACAAAGGAGAACCAGGTTAAGCTTA TTGTGTGCCTTGTGCTGATTCTTGGGTCTTCAATTGGGATTGCTGGGTATTGGGCCGCGAGTGAAGGCTGGGTTGGGTAT GTGATTGCTGGGCCGGTATGGTTGGTTGGGACCGGTGGGCTTTGGCTTGGGGTTCCGCAGGCGAAGAAGCCCAAGCTTTG GGGAGTGCCTTTGGTTCCGTGGATACCTTCTTTGTCTATTGCTATTAACATTTTCCTGCTGGGGTCTATTGATAAAGACT CGTTCATTAGGTTTACGGTTTGGACAGGGTTTCTGTTGGTGTACTATGTGTTGTTGGGGTTACATGCTTCTTATGATACA GCAAAAGAGTTTGAGAACACCAAGGAGGTTGAGAAGCAGTTCAATAAGGTGGAAGATGGGAAAGTTTATGAAGCTGTTTC CAATTGACATGCAATAA
CDS sequence (LotjaGi4g1v0390300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGACGGCGGCCTGGAAAAGCGGCGAGGATGCACGTTCCGGCGAAACGACTTCTTCCCGGAGGAGTCATTCAAGAG CTGGGGAAACTACAAAAGCGCGATCACGTCGACGCCGGCGAGGCTGAAGGATCGTGCCATGAACCGATCCAGTGATCAAA CGGAGCTGGTTGAGATCAAGTCTAGGAGCAACGTTGAAATGAAGAAGACTCTCAATTGGTGGGACCTTATTTGGTTCGGG ATCGGCGCCGTCATCGGCTCGGGCATCTTTGTCCTCACTGGACTTGAGGCCCGAGACCATGCTGGCCCCGCCGTCGTGTT ATCGTTTGTTGTCTCCGGTGTCTCCGCTTTGTTCTCGGTGTTTTGCTACACCGAGTTCGCTGTGGAAATTCCTGTTGCAG GTGGGTCATTTGCGTACTTAAGAGTAGAGCTAGGAGACTTCGTGGCCTACATAGCCGCCGGAAACATTCTCCTGGAGTAC GTAATAGGCGGCGCCGCCGTGGCTCGGTCATGGACCTCCTATTTTGCCACCCTCTGCGACAAAAAACCCGACGACTTCCG GATAATAGTGGACAGCATGGGCGATGACTACGGCCACCTCGACCCAGTGGCCATCGGTGTCCTCATTGCCATCACCGTCC TCGCCGTGTACAGCACCAAAGGCTCCTCCATCTTCAACTATGTCGCCTCCGTCTTCCACATGGTGGTCATTATCTTCATC ATCATCGCCGGCCTCATCAACGCCAAGACCGAAAACTACTCCGAATTCACCCCTAATGGCGTCCGAGGCATATTCAAAGC CTCCTCCGTCCTCTTCTTCGCCTACGTCGGTTTCGACGCAGTGTCAACTATGGCCGAGGAAACAAAGAACCCCGCCAGAG ACATTCCGATAGGACTTGTGGGGTCAATGGTGATCACAACGACGGCGTATTGCTTGCTCTCAGCAACGCTCTGCCTCATG CAGAACTACAAGGAGATCGACAAGAACGCCCCGTTTTCTGTTGCATTTAGTTCGGTCGGATGGGATTGGGCGAAGTACAT TGTTGCCTTGGGCGCGCTCAAGGGGATGACAACTGTTTTGTTGGTGAGCGCTGTGGGTCAGGCTCGTTACCTGACCCACA TTGCGCGCACCCACATGATGCCTCCTTGGTTCGCTCAAGTTGATGAGCGGACCGGGACACCAATGAATGCTACCATCTCA ATGCTCGGGGCAACCGCAGTGATTGCTTTCTTTACCGATCTCAGCATTCTCTCTAATCTCTTATCAATTTCCACTCTTTT CATCTTCATGCTTGTGGCGGTTGCCCTTTTGGTTCGCCGCTACTATTCAAGCGGAGAGACCACAAAGGAGAACCAGGTTA AGCTTATTGTGTGCCTTGTGCTGATTCTTGGGTCTTCAATTGGGATTGCTGGGTATTGGGCCGCGAGTGAAGGCTGGGTT GGGTATGTGATTGCTGGGCCGGTATGGTTGGTTGGGACCGGTGGGCTTTGGCTTGGGGTTCCGCAGGCGAAGAAGCCCAA GCTTTGGGGAGTGCCTTTGGTTCCGTGGATACCTTCTTTGTCTATTGCTATTAACATTTTCCTGCTGGGGTCTATTGATA AAGACTCGTTCATTAGGTTTACGGTTTGGACAGGGTTTCTGTTGGTGTACTATGTGTTGTTGGGGTTACATGCTTCTTAT GATACAGCAAAAGAGTTTGAGAACACCAAGGAGGTTGAGAAGCAGTTCAATAAGGTGGAAGATGGGAAAGTTTATGAAGC TGTTTCCAATTGA
Protein sequence (LotjaGi4g1v0390300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDGGLEKRRGCTFRRNDFFPEESFKSWGNYKSAITSTPARLKDRAMNRSSDQTELVEIKSRSNVEMKKTLNWWDLIWFG IGAVIGSGIFVLTGLEARDHAGPAVVLSFVVSGVSALFSVFCYTEFAVEIPVAGGSFAYLRVELGDFVAYIAAGNILLEY VIGGAAVARSWTSYFATLCDKKPDDFRIIVDSMGDDYGHLDPVAIGVLIAITVLAVYSTKGSSIFNYVASVFHMVVIIFI IIAGLINAKTENYSEFTPNGVRGIFKASSVLFFAYVGFDAVSTMAEETKNPARDIPIGLVGSMVITTTAYCLLSATLCLM QNYKEIDKNAPFSVAFSSVGWDWAKYIVALGALKGMTTVLLVSAVGQARYLTHIARTHMMPPWFAQVDERTGTPMNATIS MLGATAVIAFFTDLSILSNLLSISTLFIFMLVAVALLVRRYYSSGETTKENQVKLIVCLVLILGSSIGIAGYWAASEGWV GYVIAGPVWLVGTGGLWLGVPQAKKPKLWGVPLVPWIPSLSIAINIFLLGSIDKDSFIRFTVWTGFLLVYYVLLGLHASY DTAKEFENTKEVEKQFNKVEDGKVYEAVSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 75 | 75 | - | – | |
| PANTHER | 8 | 576 | 569 | 0.0 | – | |
| PANTHER | 8 | 576 | 569 | 0.0 | – | |
| Gene3D | 66 | 498 | 433 | 1.3E-105 | – | |
| Pfam | 71 | 469 | 399 | 7.6E-47 | ||
| Phobius | 76 | 95 | 20 | - | – | |
| TMHMM | 76 | 95 | 20 | - | – | |
| Phobius | 96 | 100 | 5 | - | – | |
| Phobius | 101 | 126 | 26 | - | – | |
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 127 | 146 | 20 | - | – | |
| Phobius | 147 | 168 | 22 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 169 | 198 | 30 | - | – | |
| Phobius | 199 | 217 | 19 | - | – | |
| TMHMM | 200 | 217 | 18 | - | – | |
| Phobius | 218 | 223 | 6 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 224 | 247 | 24 | - | – | |
| Phobius | 248 | 266 | 19 | - | – | |
| TMHMM | 261 | 283 | 23 | - | – | |
| Phobius | 267 | 285 | 19 | - | – | |
| Phobius | 286 | 296 | 11 | - | – | |
| TMHMM | 295 | 317 | 23 | - | – | |
| Phobius | 297 | 323 | 27 | - | – | |
| Phobius | 324 | 342 | 19 | - | – | |
| Phobius | 343 | 366 | 24 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| Phobius | 367 | 398 | 32 | - | – | |
| TMHMM | 394 | 416 | 23 | - | – | |
| Phobius | 399 | 417 | 19 | - | – | |
| Phobius | 418 | 422 | 5 | - | – | |
| TMHMM | 420 | 442 | 23 | - | – | |
| Phobius | 423 | 442 | 20 | - | – | |
| Phobius | 443 | 453 | 11 | - | – | |
| Phobius | 454 | 473 | 20 | - | – | |
| TMHMM | 455 | 474 | 20 | - | – | |
| Phobius | 474 | 478 | 5 | - | – | |
| TMHMM | 479 | 501 | 23 | - | – | |
| Phobius | 479 | 500 | 22 | - | – | |
| Phobius | 501 | 511 | 11 | - | – | |
| TMHMM | 508 | 530 | 23 | - | – | |
| Pfam | 509 | 559 | 51 | 2.0E-16 | ||
| Phobius | 512 | 532 | 21 | - | – | |
| Phobius | 533 | 537 | 5 | - | – | |
| Phobius | 538 | 560 | 23 | - | – | |
| TMHMM | 540 | 560 | 21 | - | – | |
| Phobius | 561 | 590 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0390300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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