Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0390500 |
Transcript ID | LotjaGi4g1v0390500.1 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | DNA damage-binding protein 1; TAIR: AT4G05420.1 damaged DNA binding protein 1A; Swiss-Prot: sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a; TrEMBL-Plants: tr|I1K4D0|I1K4D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0390500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76916976..76928197) extracted from Lotus japonicus Gifu genome v1.2.
AAATAATCAGAAAAATAAACGAGACGCAAACACACAGCACACAACGAGGGCTTGGAACTTGGCTCGTGGTTCGTAGTGAG GGTTTCTTTACAGTTACAGTTGCAGCACCCTAAGCAAGAAGCTAGGTCATGCTCTGAGAACTGAGAATCTTTGGTCTCTG TGATTTGTAACAACCAGCAGCATCGTTGTTGAAGAGAAGAAGAAGAGAACGATGAGTATATGGAACTACGTCGTCACAGC TCACAAACCCACCAACGTTACCCATTCTTGCGTCGGCAATTTCACCGGCCCTCAAGACCTCAATCTCATCGTCGCGTAAA TTCGATACTCCACTCTCTCCTTCATTCCTAGGGTTCCTCTTCAATTCGATTCATTCCTCACTCTTCAATTGTTTTCTTCC AGGAAATGCACCCGTATCGAGATTCATTTGCTCTCTCCTCAGGGCTTGCAGGTATATTATATCCCATTTCTCTCTCTTTG CATGTTACTGTAAATTTGTAAGATGAATGTGAAATTTCTCTTTGCAGCCCATGTTAGATGTGCCCATTTATGGAAGAATT GCCACGCTTGAACTCTTTCGCCCTCATGTAAGAAACAACAAACCATCTACTTTTCTTGAATTTTTATCTAATTTTTTATT TTTTTTTCTTACACAATTGCCCCCTTGTTGCTTGTTTGGTCTTAAACAGGGTGAAACACAGGATTATCTGTTTGTTGCGA CTGAAAGATACAAATTCTGTGTTCTTCAATGGGATCCCGAGACTTCTGAACTTGTTACAAGGTATGCATGAGAAGAAACC AGTTCTTGCCTTCTGAATGGACTTGCTTATGTTTTTATTTATTTATGTAGATTGGATTTAATATATGTTTTAAAAAAGAT TATTCATCAATTATTGATGCTGGGGCGTCAGCTGCTTGTGAGTGCTAATCCATTTAGTTAGTTTAGGAAGCAGAAGTTCG TATGCAGTGTGTAAAAGACAGTTTCGTATCTTTGACGCAAGCATCTTTATTCGTCAAAACTGAATTGCGCATTTGTATAA GACTAACAGTGTCAATAGTCATTGAAGCAAGGCTTTCACATGTCACCATCGGCTAAAGAAATGAAATATAATAGTGTTCA CGATGTGTGTTTTTTGCGTGCTTGTAGCTTATCAGCTGCTTAAACACTATGTATGGCCAGAAAATCCTGGTTCATGAGTT TTGTATCCTCTCTTAGGAGTTAGAGCCTATGAAGAAGGCAATTAGCATCCTTTTGAAAATAACCATGATCCCTTAGAATT TTAGGGTCATTTTGAAACTAGCCATGATCCCTTAGAATTTTAGCTTCCTTTCTTACTTGCTTTCATCTCCCTTCCGTAGT TTGAGCCTCACGTACTAGGCAACACTTTTACTTTCCTTAGGGTGGGATTAATGGTTGTTGGTTATTTGTTTCAATCAGTG GGTTAACCGCAAAAGCTGGGAATTTCAGTGAAGAATGAAGATTAAAGTTTTTCTTGAGATTGTCTCTGTAGAATGTATAG TGGGACGTTGGGTTAGGGTTAAATTAGGCATTGTAACTCAATACCAATGGGATTCCCAACTCATAATTTCAACTTTGGTG TACTTTTTACAATTAGAATCTTGTTTGTGTGTAAATTATAAATTGAAATGTCTAGTAAGAGGCTAAGAGCAATGTTGTTT ATCTCGTTTGTTTGTTGAATTTTCTGGATTGTTGTCATCCAGGGCTATGGGGGATGTTTCTGACCGTATAGGACGTCCCA CAGATAATGGACAGGTATTTAAATTGTTTCACTTCTATGTACTAATTATTCATGTGCGGTGATTGTGTTCTCACAGTTCT GATAATTTTTAACAACACCAATGCTTTTTCTAGTTTAAAGTCAAATGAATATTTTTCAGTTCATTTCAGTAGTTATACAT TTCTCTTTCTGCAGATTGGCATTATCGATCCTGATTGTAGGTTGATTGGACTCCATTTGTATGATGGCTTGTTTAAAGTA TGTAACTTCCTCTCATTCATTATCCTGCTAAAATATTAGATTAGAATGACAATACATTCAGGTTTTCAGCTTCATTTTAA CTACTTCGATCATTCACTGTTCATTGACCTTCCAGGTTATTCCCTTCGACAATAAAGGACAACTCAAGGAAGCATTTAAT ATTAGGTAATCCTATTATCTTTTAATTGTCTCCACACGGAATTTTATTTACAATTTGATCTTCATTACTAGGCGTGCATA ATTGTAGCAACTGAGGGTATTACCTTGATTAATTATTACCAGTATACCACAGTCCTAACTCTGTATGTATGACTATGACC TAGAACCTTTCATGTTGGATATTGTCATGTCTCTATATAACATGAGATAATTTTCATGTGTCATGCATTTGGGTCAATAA TGAACTTAGATGTAGTTTTTTCGGAGAGAAAAAAAAAAGGAAGTATGTACATACTTTGATTAGCTGGTTTAATCTATGTT TAATTGAATAGATGGTTTGCAAGCCAAACTATGTACCAGTTAGATGGTTAAGATGCCTATACTCCCTTGGGCTTCATATC TCTTACCTAAAGAAATCATTTATCATGGTAGAAAAAGACCTTTTTATCAACGATGACGCTCCATTTATCAAATGTACATT GGAACTTGTTTAACAAAGCTTTAAAATCTAATGGTTATGGTGGAAATAATTCATGGATGTAAAAAGATGTAGATACTGTT CCGTTTCTTTATGTCTTTTACATCATGTCCCCTTTTACTTTGGGTAATGGCTGTGCTTGGAAAACAACTGTAGCTTTATG CTCCCCTGATATGATTGTGGCTTGTGAGTTGCTTTGTGTACAGCTTTCAGTTGCAATAGTATTTAAGAGAACATTCTTAT ATATATGGGTGTAAGTTATCTGTTAGTTTTTAAAATGTCAGAGTTGACCACAATGAGTTTGCTGACAAATTTGACAAATA TAAACTATAAGTATAATAATTTGTGTTTCTGTTTCTGGTTTAGTTTAGTTATTAAAATTATGATGTACATTTTTTTCAGG CTTGAGGAGCTCCAAGTTTTGGATATTAAATTTCTCTTTGGTTGTTCGAAGCCAACTATTGTGGTTCTTTACCAGGTATA TAATTTTATTCCACCTTTTGTTTTGGGGGTATTATTAGTTCATCAAATAGACTCTGTCTGAGCTGTTAACTTGTTTGCTG TTTTTCTTTCCTTCACTCATTTATTTTTGGGTTTGGAAGACGTAGTCAGGGAGTAGAAGTCGAGAAAACTACAACACCTA TAGATTTCTTCTTATATGGATAGAAGAGCATGGGCTCTTGACTCCTGGGGAGAATTCTTGTTTCCATTTCCTTTCCACAC TGCGAGAAAAATTCTTTTTAAGAATTCCATTTGGAAATCAGGCTATTCCTATCCTCTGGAGAATCTTTCTTCAAATGAGT CAAAATTTCTTTGGGCCAAATTTATTTAGAAATCTAAACCTCTCTTCATAAGATGTAAATTGCGGCAGCATTCAGTTTAA ACGGTCCTTTGGTGTGTGTAGTCAGAGCAGAATGCTTTTATCTTAAAGGGTGTCTCTTTGACCCGAAATTTATTGTCGGA ACGAATTATGTTTGTTTCACAAACCAATGGTGACCTGCCTTCATTTGGTCTAAAGATTTTGTTTGAATAGAAAACACTTA TAAAAAAATGTCCGCACATAAGGCATGTGATCAGTATATAATAGCATGTGCTTTGTGGTTATTTTTCCCCAAAATAATTC CTTCACTTTCTAATATAGCATATAATTGATAACTAGAAGATGAAAAAAAAAATTACGGAAAGGTTCTACATGTTATAGAA ATGACTGAAGAGGTAGCATTACATTGACTGTATTAGAATTGTTGATACGTGTTGAAGACAATATTTGTAGTGTTGAGGTT TTGAGACCCGCATGTCTTAGTTGTGTTGTTGTAGTTTGACTTCATGATTCGGCACATTTATATTCATGCATAACATTATC GATTCAATGTTTCTATGTTTTTATTATCTATGTAAATGTCTGCTGCATTTTCTCTATTTCCCTTACGTAATATATTTGGT TGCAAACATAACTGCTTTTAACATAACCATTTTGATGGCTTTGGTATTATATTTAAATCAATGACAGGACAACAAAGATG CTCGTCATGTGAAAACGTATGAGGTTGCTCTGAAGGATAAAGATTTTGTTGAGGGCCCATGGTCCCAGAATAACCTTGAT AATGGGGCTGATTTATTGATACCAGTTCCCTCTCCTCTTTGTGGTGTGCTTATTATTGGTGAAGAAACCATAGTATACTG TAGTGCCAATGCTTTCAAAGCTATTCCAATCAGACCTGTATGTAAAAGAACTGTATCTGCTACTTCCATTTAAATCATCT GCTGTGAAATTTTAAATTTGATGAACTGTATCTATATTACAAAGTTTTTGGAGTTATCTAAATTATACCTTTTGATCTGC TTTTCAGTCAATTACAAAAGCATACGGAAGAGTTGATCCTGATGGTTCTAGATATTTACTTGGTGACCATACTGGGTTGC TTAGTCTGCTTGTAATAACCCATGAGAAAGAAAAGTAAGTGGTCACCCAATGTCTTGTTTTACTGTTGGTAATAATCCTT AGATATTAATCTTCCCTGTGCATAAATTTTTTGATTATGGTAATAATCTGTATTTTTTCTTAAAAAACCAACAATTCAGT ATTATAACTGCTGAAAATTATGGTTTGTCATGTACATTTATTTTGTAGGGTTACAGGACTGAAAATTGAGCCCCTTGGGG AGACTTCCATTGCATCTACACTATCATACCTTGATAATGCATTTGTCTACATTGGTTCAAGTTATGGAGATTCTCAGGTG GGTTAATAAATTTAAACAATGTTGTATAAATTGTTATCGACTCCATATTGATATGATAGTTTTTTATCCAAAATTCCGAC TCCCCTAAGTCCAACCACTTCTTTTGAACTTAGAATGACGACTCTGAATTATGCATTATTTGTATGTGAAGTAGAGTCTG CATGCTATGTCGGAAGTTGAGTAATTGCCCATGTATTGTATTGAGAATTCGAACTCTTGAAAGTTCTAGTTTGAACTTTA AAGGTAGTTCTGAAAACATGGTTTGTTTATTTAGTAAATGGCAAGATTGTCAAACTCAAGTTTAGATATACTCAATTTGT AAATTTGAAGAGACTTTTGAAATGTTACTTAAAAATATTTTATCACCCCACACATAATTTAACAGCATATATATCGCAAA TATTTAGGATTTCAACTTCATGACAAACAAAATGACAATAATAAAGTGAAAACAAGTCAACAAGACAATATAAGGATGAA CCGCCTCCTGTTCTTAGCTTCTTAACCAAAATCTGTATCATGTAGCTTTTGCAGTACTTGATGTATTTTCTTCACTGTTT ACCCTGGTTATCTCTAGGTGTTTACTTTTACTTCCATATTCAGACATGATAACATATTAACAATTTCTGATGGATGGAAT ACAGCTTATAAAACTAAATGTACAGCCTGATGCAAAAGGCTCTTATGTGGATGTTTTGGAAAGGTATGTCAATTTGGGGC CAATTGTTGATTTCTGTGTGGTAGACCTTGAAAGGCAAGGCCAAGGTCAGGTTGTAACCTGCTCTGGAGCTTACAAGGAT GGCTCTCTTCGTGTTGTCCGTAATGGAATAGGGATCAATGAACAGGTCAGTTCCCTTCCTATCGGCCCAGTGTGGGGCCT CTGCACCTGAGACATTTAAAAAAGATAAATTAAACTTTATCAAACAAAGCATGCTTTGTAAAATAAATACTATTTCATTG ATGTAGGCATCTGTAGAACTTCAAGGTATCAAAGGAATGTGGTCACTAAGATCCTCAACAGATGATCCTTTTGACACTTT TCTGGTTGTTAGTTTCATAAGAGATACGAGAATCTTAGCAATGAACATTGAGGATGAGCTGGAAGAAATTGAGATTGAGG GATTCTGTTCTCTAGTACAGACATTGTTTTGCCATGATGCAGTTCACAATCAACTTGTACAAGTAGGTTCTGACCTTATT TTCCTGCTTTGGTGTTTTTTTTCTTTTCTTGTTGATTTCGACACCTGCATCTCTCTATCTAACTCTTCGAAAAATGGATG CTGAGAAAGCTATTCAATCTGCAGAATTGTTGTCATATGAATTTACAATCAAAATTAATTAGGCTTTCTATTTATTATGT TTTTCTACATGATTGCTTTCCTTGAAGTTTTAAATTGTTTCTCAACTAATCGAATATTAATTTAAAAAATGCACTGTTAG GATCCAATTGCAAGGTAATATTGGAACTATGCGATTCTAGTGTGGGGTTTATAAGGCCTTGTGCTCTCCACAACAGCTAG CTTTTGTGGTATGATGCTCCCAAGGTTCTTAACAATTAGTATCTGAGCCTTCCACCATGTCTCTCAACTAAAGACGAGCG GCATGGGTGGTGATGCCGGCATTGCACTGTTTGCCTGGGGACTAATCAATGGGCTAGTGCACTGCCAGTCTACGTGGGCA TTGGGGCTTTAGAGCGTGGTGTGATGTTAGGATCCAATTGCAAGGAATGAGACTTGAGTCCCATATTGGAAATATAAGAT TCTAGTGTGGGGTTTATAAGGCCTTGAGATATCCAACGACAATGGCTAGCCTTTGTGGTATGGTTCTCTCAAGGTTTTAA CATGTATTACCCTTCCGTATTACAAATACCCATTCATTGTTTTAAACTTTTACATTAAGATTAATGGCATGTTTAATCTT GAGATCTGTACAAAAGTTACCTGGAGTGTGAACAGATGCACATATGTGTTTTCAATCTTAACAAAGTCATTTAAAAAAAA AAGTTTTATTTCCCCATATCTTTACTTACTCAAGACAGAAGACAGGACTGCTTTCTTCGTATTACTATGGTGTTTGTACA TAGAGTTTTAACAGGGGTTGCTTCAAAGTGTATCCTCAGTGATTCAAGTTTATTAAGTGTGCATTTGCTTTAAATATCAC TCTCCATTTTGTAATTGTGGTACTTTGAAATGAAATCAGCTTTATTAAAAGAAGATATATCATATGCACACGCAACAGAC TTCATTAAGTGGGATGTGGCTCAGTTGTTGCTGCTGTCTTTGGTTTGTTTTTGTTCGGAAAATATAAGGAAGGAAATTTG GTTGAGTCTAAGGAGAACACACTGATATTAATGGGTTGTAAACTGAGTGAACCAAAAATAATCGGAATCCATTGTAATTA AAATAAACAGATTTGAAATTATGCTTTATGTTTCTTGGAGCTTCTTGTGAAAGCTTAAGTCTTGCATGCTCATTTGTAGT TTGTTTGTGTGATCTTTGTAAGTTGATTCCATAAATTAACATTCATCATTTGTACTCTTCTATGTTTCTTGTTTTTGCTT ATTTATTTTGTTGAAATGGTAGCTTTCCAATCATTAGCTAATAAACCAACATAACAGGTCACCTCAAGCTCTGTGAGACT GGTCAGTTCCACAACTAGGGAGCTCCGGAATGAATGGCATGCACCAGAAGGCTATTCAATAAATGTAGCTACTGCAAATG CTACCCAGGTTTGATTCTTTTTTTTAAATGTTAATTTTAGACTATGGTGATATTTGCTTGTTGAATTTGAAACGTAGCTA CTGTTAATTTTTGAATTCCCTTGAGCAATGATTTGATGGCTTTTGTAAGCATGAAGGGGAGCATTCCCTGGAGGTTTTCA AAGAGCGATATGGCTCTACTTTTCAAATGCCTTCTTCCAGTATTATTATTTACTTGGCATTTCCTTGGATTCTTCAATGA TGCCTCTCACAATTAGTTTTTACTATATAGTATCAATGAAGCTATGTATAAGTTACCATTTGAGTGATTTAGCTTCAATC TATTTCATTATTTGTGCATTATGCACATTTCAGATGTTGGATTTTACTCCGCACACATTAAGTTTGTATCGAGTTGGTAA TTATTGTTACACCTGGATACAGGTTTTGTTGGCCACAGGAGGTGGGCATTTAGTTTACCTCGAAATTGGAGATGGCATAC TACAGGAAGTAAAGCACGCCCAACTGGAGTATGAGGTCTCATGCCTAGACATAAATCCAATTGGTGAAAACCCCAATCAG AGTCATCTAGCAGCAGTTGGAATGTGGACTGACATAAGTGTTAGAATATTTTCTCTTCCTGACCTGAATCTCATCACAAA GGAGCATTTAGGAGGAGAGATAATACCTCGATCTGTTCTTCTTTGTGCGTTTGAAGGGGTGCGCTTTCCTTGACCTATCT TTTTGTGTACTGTTTTTTTTTTTGCTTCTGCGTAGGGTTGACTAATTTATTTTTCTGAAATGCCGGAAGACCATTTGGGG TACTCATTTCCTAAATTCTACTTTTAGAATGGGTTTTTCGGATTTTACACATTTAAATGGTTTTGGGGAATAAACAAGAT CAGCAACATTAATGTCTATTTTACTATTCTGCTCGAGTTACATATTTTTCTAATAATGCTCCAAGGATGAATTGACACAT CTCCTAAGCTTCCATCTCATCTTTCTTAACTTCAATGGTAGTTTCCTAGTCTGAAGCTTTCTATTAAAGTGTATTGCTCA TTTGCTCTTCATTTTATTCTCCAGATATCTTACTTGCTATGTGCCCTTGGTGATGGTCATCTCTTAAACTTTATGTTGAA CACAAGTTCTGGCGAGTTAACAGATAGGAAAAAGGTCTCTCTTGGGACACAACCTATTACACTGCGGACTTTCTCATCCA AGAATACTACCCATGTATTTGCCGCATCTGATCGGCCAACTGTGATTTATAGTAGTAACAAAAAATTACTGTATAGTAAT GTGAATCTGAAGGAAGTGAGTCACATGTGCCCTTTCAACTCTGCTGCTATTCCTGACAGGTATATTTGTCTGTTTTAGTT TGACATCCAAGAATGGTTGATTTATCATTTATATCGTATTGTTGTTTCTGGGTTTCGTACTTCGATGCAAAATCCATTAT TGGCGATGGTGATGGTGATGTATTCTGCTACTCATAATTTCAACAGTTTGGCAATTGCAAAAGAAGGTGAGCTCACTATT GGCACCATTGATGACATTCAAAAACTTCATATTCGCACAATTCCACTGGGGGAGCATGCACGGCGTATCTGTCACCAGGA ACAATCAAGGACTTTTGCTATTTGCAGTTTGAAATACAACCATACAAGTGCTGAAGAATCTGAAAGTCATTTTGTCCGCT TGTTAGATGACCAGACTTTTGAGTTCATATCAACTTATCCACTTGACACTTACGAGTATGGTTGCTTCATAATTAGCTGT TCCTTCTCAGATGATAATAACGTGTATTATTGCGTTGGAACAGCTTATGTATTGCCAGAGGAAAGTGAACCAACCAAGGC AAGTTGAGAAATATATATTCTTTTCAGCTTTGGTCTTGTCAAAGCCTCTGATCCTGATTTGTTGGCCTTTTCTAAACAAA TGTAGGGAAGAATTCTTGTTTTTACTGTTGAAGATGGAAAGCTACAACTAATTGCTGAGAAAGAGACAAAAGGAGCTGTT TACTGCTTGAATGCGTTCAATGGTAAATTGCTTGCTGCTATTAATCAAAAAATTCAGCTGTATAAATGGGTGCTCCGGGA TGATGGCACCCATGAGTTACAGTCTGAATGCGGACACCATGGACACATCCTAGCTCTATATGTGCAAACTAGAGGAGATT TCATTGTAGTTGGTGATCTGATGAAATCAATTTCCTTGTTGATCTATAAGGTAAGCCTTTAAGTGGTCTTAATGCTGAAG TTTATCTTCAAATAAATTTACTATCTTCAATGTTAACTTTTCCAACGATGCCATTTCCTTTTTATTCCCACTATTTTTTG AAAACCTGATAGAAGTCTTTGATTAGTTTCGTTAAATTTTGAACAGTTGTGATCTTATCATTGTGAATGAATAGTTAATT TTCTTGATATTTACTCCATTTTCTTTCGGAATGATAAATTGTTGCTCTTCATTATTTAAGCATGAAGAAGGTGCTATTGA GGAGAGAGCTCGTGACTACAATGCAAATTGGATGTCAGCTGTTGAAATCCTTGATGATGACGTATACCTAGGTACGGAAA ATAGTTTCAATCTCTTTACAGTTCGGAAAAATAGTGAAGGTGCTACTGATGAAGAGCGGGGTCGTCTTGAAGTGATTGGT GAGTATCACCTTGGGGAATTTGTCAATCGGTTCCGGCATGGCTCCCTTGTCATGCGCTTGCCGGATTCTGATGTCGGCCA GATTCCAACTGTTATTTTCGGCACCATTAATGGCGTTATCGGGGTAATTGCCTCTCTTCCTCATGAGCAGTATGTTTTCC TGGAGAAGCTCCAGTCAAATTTGAGGAAGGTGATTAAAGGCGTTGGAGGACTGAGCCATGAGCAATGGAGGTCATTTAAC AATGAGAAGAAAACTGCGGAAGCCAGAAACTTTTTGGATGGGGATTTGATTGAATCGTTTCTTGATCTTAACCGCAGTAA GATGGATGAGGTTTCCAAGGCATTGGACGTTTCTGTAGAAGAGTTATGCAAGAGAGTGGAAGAGTTGACTAGGTTGCACT GAGTTTATTATCCTCATTTGGAGCTTCTTTGTTCCTTTATTCTTTATTCTCCTTAAACTTTTACTTTCTTTTCTGTGAAT GTGGGTTAAATTGACATAACTGTATGTGTCATCTTGTTTCCCCTAGTTTTGCCCTCAGTGTTGCTGAGACTTGTTTGCAT TTTACATTATATGGGTCACAAATGGTGTATAATAGGTGTCATGTTCAAAGGCATTTAACTGGTCTTTCCGTTTTACCCTT TTTACAATTTTCGTAATATTTGCTTTCTGGCTGTCAGTTATGGTTGCACAAAGTAGAGGGTGAAAATCGTCTCGCTAATA GAATGGTTAGATCAACTTCTCTTTTATCCGAATCAATTTTGAAATCTATCCGAATCAATTTTGAAATCTAGAAGCTACTT ACATAGGCTTCTCATCAGAATTGGTCAGAAGTTTTCAAACATGGGATGAATCTGATATCATATGTAATGTAAGGTGTAGC TTAAGTCAATGCTTATAAGTTTTGGACTTTTGGTTGAATATTTTGTAGGATTTTACTGTTAGATATGCGACAAAAGGAAT GATAAATGTTATGTCAGCTAAA
CDS sequence (LotjaGi4g1v0390500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTATATGGAACTACGTCGTCACAGCTCACAAACCCACCAACGTTACCCATTCTTGCGTCGGCAATTTCACCGGCCC TCAAGACCTCAATCTCATCGTCGCGAAATGCACCCGTATCGAGATTCATTTGCTCTCTCCTCAGGGCTTGCAGCCCATGT TAGATGTGCCCATTTATGGAAGAATTGCCACGCTTGAACTCTTTCGCCCTCATGGTGAAACACAGGATTATCTGTTTGTT GCGACTGAAAGATACAAATTCTGTGTTCTTCAATGGGATCCCGAGACTTCTGAACTTGTTACAAGGGCTATGGGGGATGT TTCTGACCGTATAGGACGTCCCACAGATAATGGACAGATTGGCATTATCGATCCTGATTGTAGGTTGATTGGACTCCATT TGTATGATGGCTTGTTTAAAGTTATTCCCTTCGACAATAAAGGACAACTCAAGGAAGCATTTAATATTAGGCTTGAGGAG CTCCAAGTTTTGGATATTAAATTTCTCTTTGGTTGTTCGAAGCCAACTATTGTGGTTCTTTACCAGGACAACAAAGATGC TCGTCATGTGAAAACGTATGAGGTTGCTCTGAAGGATAAAGATTTTGTTGAGGGCCCATGGTCCCAGAATAACCTTGATA ATGGGGCTGATTTATTGATACCAGTTCCCTCTCCTCTTTGTGGTGTGCTTATTATTGGTGAAGAAACCATAGTATACTGT AGTGCCAATGCTTTCAAAGCTATTCCAATCAGACCTTCAATTACAAAAGCATACGGAAGAGTTGATCCTGATGGTTCTAG ATATTTACTTGGTGACCATACTGGGTTGCTTAGTCTGCTTGTAATAACCCATGAGAAAGAAAAGGTTACAGGACTGAAAA TTGAGCCCCTTGGGGAGACTTCCATTGCATCTACACTATCATACCTTGATAATGCATTTGTCTACATTGGTTCAAGTTAT GGAGATTCTCAGCTTATAAAACTAAATGTACAGCCTGATGCAAAAGGCTCTTATGTGGATGTTTTGGAAAGGTATGTCAA TTTGGGGCCAATTGTTGATTTCTGTGTGGTAGACCTTGAAAGGCAAGGCCAAGGTCAGGTTGTAACCTGCTCTGGAGCTT ACAAGGATGGCTCTCTTCGTGTTGTCCGTAATGGAATAGGGATCAATGAACAGGCATCTGTAGAACTTCAAGGTATCAAA GGAATGTGGTCACTAAGATCCTCAACAGATGATCCTTTTGACACTTTTCTGGTTGTTAGTTTCATAAGAGATACGAGAAT CTTAGCAATGAACATTGAGGATGAGCTGGAAGAAATTGAGATTGAGGGATTCTGTTCTCTAGTACAGACATTGTTTTGCC ATGATGCAGTTCACAATCAACTTGTACAAGTCACCTCAAGCTCTGTGAGACTGGTCAGTTCCACAACTAGGGAGCTCCGG AATGAATGGCATGCACCAGAAGGCTATTCAATAAATGTAGCTACTGCAAATGCTACCCAGGTTTTGTTGGCCACAGGAGG TGGGCATTTAGTTTACCTCGAAATTGGAGATGGCATACTACAGGAAGTAAAGCACGCCCAACTGGAGTATGAGGTCTCAT GCCTAGACATAAATCCAATTGGTGAAAACCCCAATCAGAGTCATCTAGCAGCAGTTGGAATGTGGACTGACATAAGTGTT AGAATATTTTCTCTTCCTGACCTGAATCTCATCACAAAGGAGCATTTAGGAGGAGAGATAATACCTCGATCTGTTCTTCT TTGTGCGTTTGAAGGGATATCTTACTTGCTATGTGCCCTTGGTGATGGTCATCTCTTAAACTTTATGTTGAACACAAGTT CTGGCGAGTTAACAGATAGGAAAAAGGTCTCTCTTGGGACACAACCTATTACACTGCGGACTTTCTCATCCAAGAATACT ACCCATGTATTTGCCGCATCTGATCGGCCAACTGTGATTTATAGTAGTAACAAAAAATTACTGTATAGTAATGTGAATCT GAAGGAAGTGAGTCACATGTGCCCTTTCAACTCTGCTGCTATTCCTGACAGTTTGGCAATTGCAAAAGAAGGTGAGCTCA CTATTGGCACCATTGATGACATTCAAAAACTTCATATTCGCACAATTCCACTGGGGGAGCATGCACGGCGTATCTGTCAC CAGGAACAATCAAGGACTTTTGCTATTTGCAGTTTGAAATACAACCATACAAGTGCTGAAGAATCTGAAAGTCATTTTGT CCGCTTGTTAGATGACCAGACTTTTGAGTTCATATCAACTTATCCACTTGACACTTACGAGTATGGTTGCTTCATAATTA GCTGTTCCTTCTCAGATGATAATAACGTGTATTATTGCGTTGGAACAGCTTATGTATTGCCAGAGGAAAGTGAACCAACC AAGGGAAGAATTCTTGTTTTTACTGTTGAAGATGGAAAGCTACAACTAATTGCTGAGAAAGAGACAAAAGGAGCTGTTTA CTGCTTGAATGCGTTCAATGGTAAATTGCTTGCTGCTATTAATCAAAAAATTCAGCTGTATAAATGGGTGCTCCGGGATG ATGGCACCCATGAGTTACAGTCTGAATGCGGACACCATGGACACATCCTAGCTCTATATGTGCAAACTAGAGGAGATTTC ATTGTAGTTGGTGATCTGATGAAATCAATTTCCTTGTTGATCTATAAGCATGAAGAAGGTGCTATTGAGGAGAGAGCTCG TGACTACAATGCAAATTGGATGTCAGCTGTTGAAATCCTTGATGATGACGTATACCTAGGTACGGAAAATAGTTTCAATC TCTTTACAGTTCGGAAAAATAGTGAAGGTGCTACTGATGAAGAGCGGGGTCGTCTTGAAGTGATTGGTGAGTATCACCTT GGGGAATTTGTCAATCGGTTCCGGCATGGCTCCCTTGTCATGCGCTTGCCGGATTCTGATGTCGGCCAGATTCCAACTGT TATTTTCGGCACCATTAATGGCGTTATCGGGGTAATTGCCTCTCTTCCTCATGAGCAGTATGTTTTCCTGGAGAAGCTCC AGTCAAATTTGAGGAAGGTGATTAAAGGCGTTGGAGGACTGAGCCATGAGCAATGGAGGTCATTTAACAATGAGAAGAAA ACTGCGGAAGCCAGAAACTTTTTGGATGGGGATTTGATTGAATCGTTTCTTGATCTTAACCGCAGTAAGATGGATGAGGT TTCCAAGGCATTGGACGTTTCTGTAGAAGAGTTATGCAAGAGAGTGGAAGAGTTGACTAGGTTGCACTGA
Protein sequence (LotjaGi4g1v0390500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIWNYVVTAHKPTNVTHSCVGNFTGPQDLNLIVAKCTRIEIHLLSPQGLQPMLDVPIYGRIATLELFRPHGETQDYLFV ATERYKFCVLQWDPETSELVTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE LQVLDIKFLFGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGETSIASTLSYLDNAFVYIGSSY GDSQLIKLNVQPDAKGSYVDVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIK GMWSLRSSTDDPFDTFLVVSFIRDTRILAMNIEDELEEIEIEGFCSLVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELR NEWHAPEGYSINVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEVSCLDINPIGENPNQSHLAAVGMWTDISV RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSSGELTDRKKVSLGTQPITLRTFSSKNT THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAIPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICH QEQSRTFAICSLKYNHTSAEESESHFVRLLDDQTFEFISTYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEESEPT KGRILVFTVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDF IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGTENSFNLFTVRKNSEGATDEERGRLEVIGEYHL GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKK TAEARNFLDGDLIESFLDLNRSKMDEVSKALDVSVEELCKRVEELTRLH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 3 | 1088 | 1086 | 0.0 | – | |
PANTHER | 3 | 1088 | 1086 | 0.0 | – | |
Gene3D | 6 | 975 | 970 | 0.0 | ||
Gene3D | 15 | 347 | 333 | 0.0 | ||
Pfam | 76 | 537 | 462 | 1.9E-111 | – | |
SUPERFAMILY | 308 | 585 | 278 | 3.3E-6 | ||
Gene3D | 386 | 703 | 318 | 0.0 | ||
Coils | 422 | 442 | 21 | - | – | |
SUPERFAMILY | 499 | 887 | 389 | 4.58E-11 | ||
Pfam | 745 | 1058 | 314 | 1.0E-79 | ||
Gene3D | 1004 | 1089 | 86 | 1.3E-30 | – | |
Coils | 1075 | 1089 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi4g1v0390500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…