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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0390700 |
| Transcript ID | LotjaGi4g1v0390700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT2G34650.1 Protein kinase superfamily protein; Swiss-Prot: sp|O64682|PID_ARATH Protein kinase PINOID; TrEMBL-Plants: tr|G7L9M4|G7L9M4_MEDTR Serine/Threonine kinase family protein; Found in the gene: LotjaGi4g1v0390700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76942473..76944667) extracted from Lotus japonicus Gifu genome v1.2.
CCGTCTTCGCTTTATCCTGAACACAACACAGACACTCTCTCTTTCTCTCTGACGCTTCCCTTATTGCTCTGAAACATCTT CGTACGTTTTCTTTCACTATATTGTGCTCTCTTCACTCTTACCAAAACAAAACCGCAGTTTCAATCCCTTCACAAAACCA TACTAAACCTCGATCGCTTCACTTTCATTCAACTCAACCAACCACTTTTTCTACGTACCATGTTAGACAACGGTGGAGGT TGTGGTGGTGCACGTGACTCTGAGGTGAGTTTAGAGACTGTGAATTCGAATCAGACTCAGAGAAGCTCAATGAGCAGTGA GAGCATGTGCAGCACCAGCTTCAGCCGTCTTTCCTTCGACCTCCTGCCGGCTTCGCCGGAGAGTCTCTCACTCAAACCTC ACCGCTCCTCTGACTTCGCCTACTCCGCCATCCGCTCCGCCACGTTCCGCCGTAAATCCGCCCTCACGTTCCGCGACTTC CACCTCCTCCGCCGAATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAGTAACTCCAACCACAAACT CGACAACGACGAGCAAATTGTAGAAGAAGAGGACTGCTTGTACGCCATGAAGGTGGTGGACAAGGACGCCGTGGCGTTGA AGAACAAAGCGCAGAGAGCAGAAATGGAACGGAAGATCTTGAAAATGCTTGATCATCCTTTCCTTCCTACTCTCTACGCT GAGTTCGAAGCCTCTCATTTCTCTTGCATTGTCATGGAGTTTTGCTCCGGCGGAGACTTGCATTCCCTCCGCCACAAACA ACCTAATAACCGTTTTCCCTTATCTTCCGCGAGGTCAGTTACGATTCTGTTACAACAACAATTAGTTTGTTACAGTTCAG TTATGCAGTTATACTCATCTTTTTTTCGCTTGCTCAGATTTTACGCGGCGGAGGTACTGGTGGCGTTGGAGTACCTACAC ATGCTGGGAATCATATACAGAGATCTGAAGCCGGAGAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTT CGATCTCTCACTCTGCTCAGACGCAATCCCCGCCGTTGAATCCTCAGATTGCTTACACGATGCCGCGTTTCCACCTGCAT TGCCCTACACTCGTTCACGGAGTTCCCTAATCACTCCCTTCTCATGCTTCTCTAACCGCCTCTTCCGGTCCCGCAAGGTC CAGACGGTCCAACCGAACCGCCTCTTCGTCGCGGAACCGGTCTCCGCCAGGTCATGCTCTTTTGTCGGGACTCACGAGTA CGTCTCGCCTGAGGTCGCCGCCGGGAGGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTCGGGATATTCATCTACGAGC TTATCTACGGTCGCACTCCGTTTGCGGCTCCATCGAATGAGGCTACACTGCGGAGCATCTTAAAGAAGCCTCTGACGTTT CCCACTGCCGCGCCTTCAAGCGCGCTTGAGGTCCACGCGCGGGATCTTATAACCGGGTTGCTGGACAAAGATCCGGCGAA TAGGCTCGGGTCGAAGCGCGGCGCCGCTGACATCAAGAAGCATCCGTTCTTCAAAGAGCTCAACCTGGCACTGATTCGTA TGATGGCGCCGCCTCGTGTTCCCGGCTCGAGAAGGCAGAAAACGACGTCGTGTAACGCTATGAAACAGCAACCGACGGCG TCGTTTGGTTATTACTTTTGAAAAAACGGACAGTGACGTATTTGTATATTGGAGCGAAAATATTTATCTTAGGGAACATT TTATTTATTCTGTTTTTTTATTTTAAGCTTTAATAATTATTAATTATATGATGTAGCAACACAGAGTGGTTTTTCTTCAT AAAAAAATGAATTATTATGATGTGTATGAAATCGAGAGTGGGAAGAGGGAGTAGTTGAATGTTGCTCCCTTTTTTGGTTG CCCTATGACGGAATCGTGATAGATTGATAGGCTTTAGAAACAGAACTTGGTTCTCAATTTCCTTTTATGGAATGCCTAGA TGAGTCTACCGTGGAAAAATGAAATGGGGAGAAGGGTACCAAATGCAGAAGATTCGTTGCTTAATTTATTTTCCTCTTCT TCACACACTTCTTGAAGAGGACAAATGAAAGATAATGTTACAAAAATCCAACATGCTTTTTTAAGCATCTATGCAGTATG CATCATAGTCAATATATTATATTATTCTGCCTAAA
CDS sequence (LotjaGi4g1v0390700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAGACAACGGTGGAGGTTGTGGTGGTGCACGTGACTCTGAGGTGAGTTTAGAGACTGTGAATTCGAATCAGACTCA GAGAAGCTCAATGAGCAGTGAGAGCATGTGCAGCACCAGCTTCAGCCGTCTTTCCTTCGACCTCCTGCCGGCTTCGCCGG AGAGTCTCTCACTCAAACCTCACCGCTCCTCTGACTTCGCCTACTCCGCCATCCGCTCCGCCACGTTCCGCCGTAAATCC GCCCTCACGTTCCGCGACTTCCACCTCCTCCGCCGAATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCG CAGTAACTCCAACCACAAACTCGACAACGACGAGCAAATTGTAGAAGAAGAGGACTGCTTGTACGCCATGAAGGTGGTGG ACAAGGACGCCGTGGCGTTGAAGAACAAAGCGCAGAGAGCAGAAATGGAACGGAAGATCTTGAAAATGCTTGATCATCCT TTCCTTCCTACTCTCTACGCTGAGTTCGAAGCCTCTCATTTCTCTTGCATTGTCATGGAGTTTTGCTCCGGCGGAGACTT GCATTCCCTCCGCCACAAACAACCTAATAACCGTTTTCCCTTATCTTCCGCGAGATTTTACGCGGCGGAGGTACTGGTGG CGTTGGAGTACCTACACATGCTGGGAATCATATACAGAGATCTGAAGCCGGAGAACGTGTTGGTCAGATCAGACGGTCAC ATCATGCTTTCTGATTTCGATCTCTCACTCTGCTCAGACGCAATCCCCGCCGTTGAATCCTCAGATTGCTTACACGATGC CGCGTTTCCACCTGCATTGCCCTACACTCGTTCACGGAGTTCCCTAATCACTCCCTTCTCATGCTTCTCTAACCGCCTCT TCCGGTCCCGCAAGGTCCAGACGGTCCAACCGAACCGCCTCTTCGTCGCGGAACCGGTCTCCGCCAGGTCATGCTCTTTT GTCGGGACTCACGAGTACGTCTCGCCTGAGGTCGCCGCCGGGAGGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTCGG GATATTCATCTACGAGCTTATCTACGGTCGCACTCCGTTTGCGGCTCCATCGAATGAGGCTACACTGCGGAGCATCTTAA AGAAGCCTCTGACGTTTCCCACTGCCGCGCCTTCAAGCGCGCTTGAGGTCCACGCGCGGGATCTTATAACCGGGTTGCTG GACAAAGATCCGGCGAATAGGCTCGGGTCGAAGCGCGGCGCCGCTGACATCAAGAAGCATCCGTTCTTCAAAGAGCTCAA CCTGGCACTGATTCGTATGATGGCGCCGCCTCGTGTTCCCGGCTCGAGAAGGCAGAAAACGACGTCGTGTAACGCTATGA AACAGCAACCGACGGCGTCGTTTGGTTATTACTTTTGA
Protein sequence (LotjaGi4g1v0390700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDNGGGCGGARDSEVSLETVNSNQTQRSSMSSESMCSTSFSRLSFDLLPASPESLSLKPHRSSDFAYSAIRSATFRRKS ALTFRDFHLLRRIGAGDIGTVYLCRLRSNSNHKLDNDEQIVEEEDCLYAMKVVDKDAVALKNKAQRAEMERKILKMLDHP FLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPNNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGH IMLSDFDLSLCSDAIPAVESSDCLHDAAFPPALPYTRSRSSLITPFSCFSNRLFRSRKVQTVQPNRLFVAEPVSARSCSF VGTHEYVSPEVAAGRSHGNAVDWWSFGIFIYELIYGRTPFAAPSNEATLRSILKKPLTFPTAAPSSALEVHARDLITGLL DKDPANRLGSKRGAADIKKHPFFKELNLALIRMMAPPRVPGSRRQKTTSCNAMKQQPTASFGYYF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | - | – | |
| PANTHER | 8 | 464 | 457 | 5.6E-246 | – | |
| PANTHER | 8 | 464 | 457 | 5.6E-246 | – | |
| MobiDBLite | 16 | 34 | 19 | - | – | |
| SUPERFAMILY | 68 | 445 | 378 | 2.16E-77 | ||
| CDD | 85 | 440 | 356 | 2.25262E-160 | – | |
| Gene3D | 86 | 185 | 100 | 2.1E-45 | – | |
| Pfam | 87 | 249 | 163 | 1.0E-30 | ||
| SMART | 87 | 423 | 337 | 1.7E-83 | ||
| ProSiteProfiles | 87 | 423 | 337 | 42.803 | ||
| Coils | 130 | 157 | 28 | - | – | |
| Gene3D | 186 | 250 | 65 | 2.1E-45 | – | |
| ProSitePatterns | 223 | 235 | 13 | - | ||
| Pfam | 317 | 423 | 107 | 3.0E-18 | ||
| Gene3D | 317 | 443 | 127 | 9.8E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0390700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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