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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0397100 |
| Transcript ID | LotjaGi4g1v0397100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phototropic-responsive NPH3 family protein; TAIR: AT5G10250.2 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9LFU0|DOT3_ARATH BTB/POZ domain-containing protein DOT3; TrEMBL-Plants: tr|A0A0S3QYG2|A0A0S3QYG2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0397100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77481208..77485129) extracted from Lotus japonicus Gifu genome v1.2.
CTAAATCCTAAGCTTACTGCATTTAGCTAAAGAACACAATGAACTCCCTTCAATTGGTCCAGACACCAGACCCTGGGAGC CAGACTGACAGAAATGATCAAGTTTCAGACAAAAGCATTGTAGTTCCTAAGAAACTTGTCACTGTAGCTGATAGCTTCAA AGGAGAACTTTCATGGTACTGCTAGAAATAGGATCTTTTATATTCTAGGAAGCTAAAAAGTAACTAGCAGTCTATATTTT TGCATGTCTAACCAAGTATGGTTCTCCCCCACCCCTCTTATATTCTCCTCACTTGCCGTACTTTTAACATGTTTGGAAAT CTTTCTACAATTGATTCTAAAACTAAAATCAATTCTGGAGAGAATCTTCTGAAAGTGGCTTATGGGTGCCAGAATTGGTT TAGAGAAAAAATAAGCTGATCCAAACATATTAAAATGTCTAACCTCTACCACTTCTTTGTATATGGGTCTGTTTTTTTCT CTTTTATTTTCTGATTTGAGATTGTGCAGGTTCATTGCTCCGCAAATCCCAACAGACTCTTCAATTCAAGTCCAGGAAAT CATTTATAATGTACACAAGGTACATATAACATCATAGACATACCTTATTAATGTTGAGAATCATTGACCTTCCCTCGTGA TATTGGTTGTCATCAGCAGTCAATATACTAGACATGAAAATGATATCATCATATCCCTTTCTAAGTGTCTAGTAGTAAAA TCCCTCATCACACTGTCATCTCAATTAGTGACAAACTGGTGAAGAGAACAATTCTATGATAGGTTGCATAAGATACATTG ATTCCTTTTCTTCCTAGAGTGTATATTTGACTATTTGTGTGTGCTGTGCATGTCATGTATCTCATTTCCCCTTTTCAGAT ATTAAAAAATGAAAAAAAAAAAGTTTCTCAAGAGATAAACAGAACATCAGAGACAGATTAGGAATCCTCTTAAAACAAAT AGGAGATAATAACAGGATTTTTTTAATTACATTTTAGTTGATATTTTTCAGTGATAAAAACCTACTATTTTTATTTTGTT TCATGTTTTCAAGATTTGGTGGACAGAGGATCTTGGTCATTGGTGGAATATATATGTATATGTATATATATATATATATA TATATATATATATTCACAGTTTCCTTAACAAAATCTTGAAAACAACAAATGGCATAAAAACATGGTCAGCTTGTTGTAAT GAAAATACATCAAGTGAATATAAAGATAACAAAGAAACCAAACACCTCACTGAGCAACTTATCTTAAACATTTCATATGT TGGCTATTTTTTCTGTAACAGTACCCCTTGATATCAAAATGTGGCTACATAGGACGACTGGAGGTTCAGCCATTGATATC AAGTTCTAGCAAAGTGCTTAAGCTTGAAAACTTTCCAGGAGGACCTGAAACATTTGAAACAATTCTAAAATTCTGTTATG GTCTCCATGTAGACTTCAAACCAGATAACATAGCTGCAATAAGATGTGCATCAGAATTCCTAGAGATGACTGAGGATCTA GAAGAAGGAAATCTCATTTCCAAGACAGAAGCTTTTCTCACTTTTGTTGTGCTCTCTTCATGGAAAGACACTGTCACTGT TCTAAAATCTTGTGAAAATCTATCTCCATGGGCTGAAAACCTCCAAATTGTAAGAAGATGTTGTGATTCCATTGCTTGGA AGGCTTCTAAAGATGCTCCTACAATTGAGGATGCAGCATCTAATCAAGAAAACTGGTGGTTCAATGATGTTGCCGCCTTC CGCATCGACCATTTTATGCGTATTATTTCAGCAATAAGGGCAAAAGAAACCAAACCAGAGATCATTGGTAAATGTATCAT GCAATACGCAAAGAGATGGCTACCGGGAATGGATGAGGAGCTGGAAGGGCTAAGAGGATATGGACATGGAAAAAGTAACC TACACTTCACTGTTTTTAGTGGGAAGGAAAAAGAAAGCAGTGCACACAGCAAGCAGCAAAAGACAATTATTGAAAGCCTA GTAAGCATACTTCCTCCTCAACAAGAAGCTGTCCCATGTAAGTTCTTGTTGCAGATGTTAAAGATGGCCATGATGTATTC TGTATCACCAGCTCTCACTTCGGACCTCGAAAAAAGAGTTGGTGTGGTGTTGGAAGATGCTGAGGTGAATGATCTTTTAA TTCCAAGATATCAAAATGGAGATCAAGGAAAAACTGTCAAGTGAGTATCTAACCATTCTTTCATTAATGCAAAAAAATGA CTGATGATACTTGCTGAAAAATCCCACATTGATTAGAGACATGGTCAAATAAGTGTTATAAAGGGTAGAGCAATCACCCC ATAGCTAGCTTTTGGGGTAGGCAGTAGAGTTAGGCCTAAATTGAAATCTAATAATACTAAATGCAATCCTTTTATTTTCC TATTCATGTGCAGCATGAATAATTCATCTGAAGAGTGCACTATGGAAGACATAGATGTGGTGCAACGAATTGTTGAATAC TTCCTGATGCATGAACAACAGCAGATGCAACTGCAACAGAAGACTGCGAAATTCAATATTAGTAGGCTCTTGGACAATTA CCTAGCTGAAATTGCAAGAGATCCAAATCTTTCAATCACCAAGTTCCAAGTTCTAGCTGAATTGCTACCAGAAAACACTC GATCGTTTGATGATGGTCTATATAGAGCCATTGACACCTACCTCAAGGTCATCCTTTTAACTCTTATTTTCTTGTGTTTC AGTTTCCTGTTTTGAGTGTTGTAAAAAGGATTTCAAAACAAAGTTTTGATACACTGATATTAACATCTCTCCAGACCCAT CCTTCACTGACCGAGCATGATCGTAGAAGACTGTGCAAAACAATGAACTGTGAGAAACTCTCACTTGATGCATGTATGCA TGCTGCACAAAACGACCGATTGCCTTTAAGAGCTGTTGTCCAGGTAAAGTTTCAGGCTCTCTGGAACCTAATTTAAAACT AATTTCAGCTTCATACATGATAAATTAGAAGTGGCGAGTTAAGATTTCAAGTTCTTCAGAAAAAAATGATGAAATCATCA TGAAACGCAATTCAGATTAGTAGCATCCGTTAACTGAGAAACACAGTAACCCAAGTGAAAACAATGTGGTATCTTTGTAA TTAAAATTGACAACAGAAAATGGAAATAGAAAATGAAAACCAAACATGCCCCTAAGTCCAATTTCAATAAGAAATTTAAA ATTATGCAAATAGCACTGAGGATCTGGTTCACAAATATAGATCCCATCTAAGAAAGTGTGGGTAGCAAAACAAAAGCAAG AGAAGGAGCCAAATGGTACTTTTAGACCTAATATGACCAAATGGTGATTCAGCTTAAAAGTTGTCACCTGAATGAGAAAG TATACTAGTGCAGGTTTTATTTCAGGAGCAAGTAAAGTTGAGGGCGGCAATGCAAGAGAAGGAGCCAGCACAAAGTGGAA TCCAGACTGAACAGGACGAAAATCAGATATCTGCAACTATCGACATAAAAACACTCAAAGCAGAACTTGAGAATGTAAAG TCTAAGATGGTAGAACTGCAGAGTGACTATTTTGAGTTGCAACAAGAGTATGAAAAGTTAAGCAACAACAAGCCAAAGAA TTCATCAGCGTGGAGTTTTAATTGGCGGAAGATTAAGAACTCCTTTCATACAAAACCAGCAGGAGTTGAAACTGGAGATG GACAGGATAAGCCCAAGACACCAAACCAGACTCGAAGTAAAGAAACCCCTAGAAGAAGGCAATCCATGTCTTAAAATACT GCAACAGGCTAAATCCTGCAGCAAAGCCATTTTTTATATGAAGCATAACGTCTCAATTTTATATCTACAGATATTGTTGA CTCCAAAGAAAGAAAAACGTTCCTTGTTGGCTGTAGCTTCCATATTTCCAAATGCTGCAATTGAAGTAATACATATAAAA AC
CDS sequence (LotjaGi4g1v0397100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTCCCTTCAATTGGTCCAGACACCAGACCCTGGGAGCCAGACTGACAGAAATGATCAAGTTTCAGACAAAAGCAT TGTAGTTCCTAAGAAACTTGTCACTGTAGCTGATAGCTTCAAAGGAGAACTTTCATGGTTCATTGCTCCGCAAATCCCAA CAGACTCTTCAATTCAAGTCCAGGAAATCATTTATAATGTACACAAGTACCCCTTGATATCAAAATGTGGCTACATAGGA CGACTGGAGGTTCAGCCATTGATATCAAGTTCTAGCAAAGTGCTTAAGCTTGAAAACTTTCCAGGAGGACCTGAAACATT TGAAACAATTCTAAAATTCTGTTATGGTCTCCATGTAGACTTCAAACCAGATAACATAGCTGCAATAAGATGTGCATCAG AATTCCTAGAGATGACTGAGGATCTAGAAGAAGGAAATCTCATTTCCAAGACAGAAGCTTTTCTCACTTTTGTTGTGCTC TCTTCATGGAAAGACACTGTCACTGTTCTAAAATCTTGTGAAAATCTATCTCCATGGGCTGAAAACCTCCAAATTGTAAG AAGATGTTGTGATTCCATTGCTTGGAAGGCTTCTAAAGATGCTCCTACAATTGAGGATGCAGCATCTAATCAAGAAAACT GGTGGTTCAATGATGTTGCCGCCTTCCGCATCGACCATTTTATGCGTATTATTTCAGCAATAAGGGCAAAAGAAACCAAA CCAGAGATCATTGGTAAATGTATCATGCAATACGCAAAGAGATGGCTACCGGGAATGGATGAGGAGCTGGAAGGGCTAAG AGGATATGGACATGGAAAAAGTAACCTACACTTCACTGTTTTTAGTGGGAAGGAAAAAGAAAGCAGTGCACACAGCAAGC AGCAAAAGACAATTATTGAAAGCCTAGTAAGCATACTTCCTCCTCAACAAGAAGCTGTCCCATGTAAGTTCTTGTTGCAG ATGTTAAAGATGGCCATGATGTATTCTGTATCACCAGCTCTCACTTCGGACCTCGAAAAAAGAGTTGGTGTGGTGTTGGA AGATGCTGAGGTGAATGATCTTTTAATTCCAAGATATCAAAATGGAGATCAAGGAAAAACTGTCAACATGAATAATTCAT CTGAAGAGTGCACTATGGAAGACATAGATGTGGTGCAACGAATTGTTGAATACTTCCTGATGCATGAACAACAGCAGATG CAACTGCAACAGAAGACTGCGAAATTCAATATTAGTAGGCTCTTGGACAATTACCTAGCTGAAATTGCAAGAGATCCAAA TCTTTCAATCACCAAGTTCCAAGTTCTAGCTGAATTGCTACCAGAAAACACTCGATCGTTTGATGATGGTCTATATAGAG CCATTGACACCTACCTCAAGACCCATCCTTCACTGACCGAGCATGATCGTAGAAGACTGTGCAAAACAATGAACTGTGAG AAACTCTCACTTGATGCATGTATGCATGCTGCACAAAACGACCGATTGCCTTTAAGAGCTGTTGTCCAGGTTTTATTTCA GGAGCAAGTAAAGTTGAGGGCGGCAATGCAAGAGAAGGAGCCAGCACAAAGTGGAATCCAGACTGAACAGGACGAAAATC AGATATCTGCAACTATCGACATAAAAACACTCAAAGCAGAACTTGAGAATGTAAAGTCTAAGATGGTAGAACTGCAGAGT GACTATTTTGAGTTGCAACAAGAGTATGAAAAGTTAAGCAACAACAAGCCAAAGAATTCATCAGCGTGGAGTTTTAATTG GCGGAAGATTAAGAACTCCTTTCATACAAAACCAGCAGGAGTTGAAACTGGAGATGGACAGGATAAGCCCAAGACACCAA ACCAGACTCGAAGTAAAGAAACCCCTAGAAGAAGGCAATCCATGTCTTAA
Protein sequence (LotjaGi4g1v0397100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSLQLVQTPDPGSQTDRNDQVSDKSIVVPKKLVTVADSFKGELSWFIAPQIPTDSSIQVQEIIYNVHKYPLISKCGYIG RLEVQPLISSSSKVLKLENFPGGPETFETILKFCYGLHVDFKPDNIAAIRCASEFLEMTEDLEEGNLISKTEAFLTFVVL SSWKDTVTVLKSCENLSPWAENLQIVRRCCDSIAWKASKDAPTIEDAASNQENWWFNDVAAFRIDHFMRIISAIRAKETK PEIIGKCIMQYAKRWLPGMDEELEGLRGYGHGKSNLHFTVFSGKEKESSAHSKQQKTIIESLVSILPPQQEAVPCKFLLQ MLKMAMMYSVSPALTSDLEKRVGVVLEDAEVNDLLIPRYQNGDQGKTVNMNNSSEECTMEDIDVVQRIVEYFLMHEQQQM QLQQKTAKFNISRLLDNYLAEIARDPNLSITKFQVLAELLPENTRSFDDGLYRAIDTYLKTHPSLTEHDRRRLCKTMNCE KLSLDACMHAAQNDRLPLRAVVQVLFQEQVKLRAAMQEKEPAQSGIQTEQDENQISATIDIKTLKAELENVKSKMVELQS DYFELQQEYEKLSNNKPKNSSAWSFNWRKIKNSFHTKPAGVETGDGQDKPKTPNQTRSKETPRRRQSMS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 20 | 629 | 610 | 8.1E-292 | ||
| PANTHER | 20 | 629 | 610 | 8.1E-292 | – | |
| SUPERFAMILY | 39 | 140 | 102 | 2.83E-14 | ||
| Gene3D | 45 | 199 | 155 | 2.2E-7 | – | |
| CDD | 45 | 150 | 106 | 7.34058E-35 | – | |
| Pfam | 54 | 140 | 87 | 7.4E-5 | ||
| ProSiteProfiles | 54 | 123 | 70 | 8.917 | ||
| Pfam | 213 | 487 | 275 | 5.1E-97 | ||
| ProSiteProfiles | 213 | 511 | 299 | 86.206 | ||
| Coils | 541 | 575 | 35 | - | – | |
| MobiDBLite | 594 | 629 | 36 | - | – | |
| MobiDBLite | 612 | 629 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0397100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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