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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0397700 |
| Transcript ID | LotjaGi4g1v0397700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT5G65020.1 annexin 2; Swiss-Prot: sp|Q9XEE2|ANXD2_ARATH Annexin D2; TrEMBL-Plants: tr|I3RZY7|I3RZY7_LOTJA Annexin; Found in the gene: LotjaGi4g1v0397700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77540405..77544333) extracted from Lotus japonicus Gifu genome v1.2.
AATACTATCTTTTTCTCTTCATATCTGCCTCTTCAACAACCTCATTTTAAGTTCTATCTTTACATCTCTTCGTTTTTCAA GGAAACAAACAAAATTTCTCATTAAAAAAAAAAGGAATTGTTTTTTTTATTTTTCACGTGGCGAAACCAGGTCGTACTAT GTTCTGTATAAATGATTAAGCTCCCATTACCACATTGCTATCATTTGTCAACGTCACCTTCTTCTTCTTCTTCTTCTTCT TAACTGAGATCTTGATCACACAATGGCGACCTTGAAGGTTCCTTCTCAAGTTCCTTCTCCTGCTGAAGACAGCGAGCAAT TACGCAAAGCATTTCAAGGTATCCCTCACTCACTCACTCACTCACTCACTTCTTTTCATTTCGTTGACTTTTGATTTTTG TTAATCATATAATGGATCATCGATTGCTTTACATTTTCTAGATCTATGCATTTAATTCTATAGGTATGTTTATCTGATCG AGATCATGGAATAATTTGTTGTAGCGCTTCTGATCATGTTTTACATATATGCATTACAGGTCTGTGTTACCATAATGTGA TGCTATGTGTTTGGTTTATACAGTTATGGTTACTGTTAGTAATTTCATCTTGATGAATGCAGATGATTATTCAGATTTGA TTTCATCTTTTTTTTTAATCTAATTTCATTCTCATTTGCTTTTCTTGCTGATCTTATTAACTACTTTGTTTGCATTCTGT AAAGAACTAAGTGTTTGTTTTTCCATTGGGAGTTCTTTTGGAGAATTGATTTCAAATCTAAAATCAATTCTGGTAAAACT AGAGAGAGTAACTTTTCTGTTGAAGAAAATCAATTCTAACATTTTACAACTTAAATTTCACAACATTACCCATCATTTTT TCATAAATGTATTCAAATATAAATCACTTTGTTTCAACTCAGTTTTACCATAATCAATTTTATCGAAATCAGTTTTACCA AAATCAATTGTGACATACGTTAATCCAAACACGAACTAAATAGAACGGTAAAGTAATTCAGCACGTAAATAAACTAAGCG CTACCTTCATAATTGGTAGGATTTTTATTTTTATTTATGTTGTCCAAGTTTGTTCAAACTCAATGATATGAAGTGCAGAA TGATGCCAGAAAAAATTAACATATAGCAAAATTGAAAGTTTGAGTGATTGAGTTGTGTTCACTGTTTAGATAAGCGAATT TACGTTCTTCCTTTGTTTAATTTCTCTTGGCATGAGGTCTTTTCTATTCTCTGGTTACATAATTTTTGACTCAATTATTC TCACTTTGATATAACTTTGCAGGATGGGGAACGAACGAAGACTTGATAATATCAATCCTCGCTCATAGAAATGCAGCTCA GCGTAAGTTGATTCACGAAACTTACTCTCAAACCTATGGCGAAGATCTTCTCACTGATTTAGACAAAGAACTTTCAAGTG ACTTTGAGGTCAGTTTGAATCTTTTGATAGCTAGCTTCTGTATGTGAAATTGTGAATCAATCTCCAGTTGACGCCTATTT TATTTGTAGTTCAATTTTGATATCAGTTATAGACTTTTCAATTTCCTTAGTACTCGATTTCAGTGTTCTTTATGGTAACA ATGACTAAAGGAAACAGATAGGTGCAGTTTATGAGAATTTTTTCCTGTCTAATGTTTTGAATATAACAGCGGGCTGTGGT GTTGTGGACATTGGGTCCTGCTGAGCGCGATGCTTTTTTAGTTAATGAAGCCACTAAGAGGTTGACTAAAAACAACTGGA TCCTAATGGAAATTGCTTCCACTAGATCTTCACTTGACCTCTTTAAGGCAAAGCAAGCATACCAAGCTCGTTTCAAGAGG TCCATTGAAGAAGACGTTGCCTATCATACTTCTGGGGACATCCGCAAGGTAGCCTTAACTTCTAATATAATTGTTGATAT CTTGATCGAGAAACTTGCATTCCTTCCATAATTGTTGATATCTTGATTTCATTTGATATCTTTCAAATTTTATGGAGTAT AAGACTTTTCAACTTAAAGGAGAACCTTTAACTTGTAGAAATGTACCTCAGATATATGTCAAAAGAACAGATATGTTCTA AAAATATATGCATCTTAAGAGGGTGGATAAATTCATTATAGTCAATCATTAGGTTTAGAAGGTAATAGTCTATTTTTGTC ATTCTTATGTTGTGGCTGAATTGTTATTTTTCAACATTTTTTTTACATGATGAAACTTTATTTCTGATATTTCAATATCA GCTTTTGGTTCCTCTTGTGGGGACATTCCGTTATGATGGGGATGAGGTGAACATGATACTGGCAAAATCTGAGGCTAAAT TGCTTCATGAGAAGATTGCAGAGAAGGCCTACAATCATGAGGACCTGCTCCGGGTTATAACAACAAGGAGTAAAGCACAG CTAAATGCAACTCTAAATCACTACAACAATGAATTTGGGAATGAAATAGACAAGGTATAAATGTTTTGGCCATTCATGAC ACATTGCTTTGTTTTCAACTTAATGCTTACTTTTTGCTTTAGTACCTACAACTACAAGAACACTTAGGCAGAGTGCAAAT TTTCTTTGACAACTATCTCAGGAAATTGGCAGATCTAATACAATGCGGAGCTTGTGTTGTCAAATGTCAACAATGTTCGG CTGTGTTTGGTTTTCAGTTCGGAAGTCCGTTTGGGGCATTGGAATTCGAGATTACACATTCCAATGCCCCAAACGTGAAA GAGGCTTTGGACCTCTGTTGGGTGAAAGCACTTTCAAACTGAACCAAACAGACATGTTAATGTTCATTTCAAGAAACAAG ATTTCCAGTGATAATAATTGTGTGGATGAATTAATTACTACTTTTTGAGGGATTGTATTCAGGTTTACACTGTTAGTTAA AAAAAAGGAGACATGATAGAATTTATCATCAAACAATTGTAAGATTAAATCATTCACTTGTAGTCAAACTGACCATAGGT TTTTCATTTTTGGTCGCAGGATCTGGAAACTGATTCAGATGATGAATATCTGAATTTATTGAGGGCAACAATTAAGAGCT TGACCTATCCTGAGAAATATTTTGAGGAGCTCTTAAGGCTGGCTATAAACAAGACGGGAACTGATGAATGGGCTCTTACT AGAGTGGTAACAACTAGAGCTGAAGTTGATTTACAGAAAATTGCAGAGGAGTATCAAAAAAGAAATAGTGTTCCGCTGGA CCGTGCAATCGCCAATGACACTTCTGGAGACTATCAGAAAATTCTTCTTGCTCTGATGGGACATGATGATTAAGTGTTCT TACTCTGCTCTGTTGTCATGAGATTACTGTCTGTTTTTCCTTTTTATCATCAATGTAACTTTGTTGTGGGTCTTTGGACA CCATGTTTGTGAGAGATGTGTGAAATAATATGTTTCGAGTATGGCAAGAAGTTCAAGACGCTTTGCCTCCTTAAATAAAG AGAAAGATTTGCTATTGTTTGTTATTGAGGAATCAGGATCAATTATTCCTACAGTTGACCAACAACTCATGAAACTCCTG CCTATAGAATGTACCTTGTTAGTAAGGTCGTGTTATGTTCGAAATTGTGGCTGTGCTTCCAATTAGCACAGGGTGTTCAA AAAATCCGGTTTCAATAACCAATCCATAACCAAACCATAACCATATCCAGAAAATCCGGTTTCATATAAAACCGGTTTTA ATTTATCCAGTTTTTAAAGTGGATACAAATATGGATATCCAGTTTTTAAATTTGGTTAAAAAACCGAATTACCATATCCA AAACCAAATTCAATATTTTTAAAAATTCAATATTTCATTATTCATATACCTAATTCATAACCGGTTTTACTTCCAATTTC CAAAACCCAAATTCAATTCCATGTTTCAACCATGAAAGAACCCTAATTCCCAATTCCAATCCAACTCGCCGCCGCCCAAA AATCTCGCC
CDS sequence (LotjaGi4g1v0397700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACCTTGAAGGTTCCTTCTCAAGTTCCTTCTCCTGCTGAAGACAGCGAGCAATTACGCAAAGCATTTCAAGGATG GGGAACGAACGAAGACTTGATAATATCAATCCTCGCTCATAGAAATGCAGCTCAGCGTAAGTTGATTCACGAAACTTACT CTCAAACCTATGGCGAAGATCTTCTCACTGATTTAGACAAAGAACTTTCAAGTGACTTTGAGCGGGCTGTGGTGTTGTGG ACATTGGGTCCTGCTGAGCGCGATGCTTTTTTAGTTAATGAAGCCACTAAGAGGTTGACTAAAAACAACTGGATCCTAAT GGAAATTGCTTCCACTAGATCTTCACTTGACCTCTTTAAGGCAAAGCAAGCATACCAAGCTCGTTTCAAGAGGTCCATTG AAGAAGACGTTGCCTATCATACTTCTGGGGACATCCGCAAGCTTTTGGTTCCTCTTGTGGGGACATTCCGTTATGATGGG GATGAGGTGAACATGATACTGGCAAAATCTGAGGCTAAATTGCTTCATGAGAAGATTGCAGAGAAGGCCTACAATCATGA GGACCTGCTCCGGGTTATAACAACAAGGAGTAAAGCACAGCTAAATGCAACTCTAAATCACTACAACAATGAATTTGGGA ATGAAATAGACAAGGATCTGGAAACTGATTCAGATGATGAATATCTGAATTTATTGAGGGCAACAATTAAGAGCTTGACC TATCCTGAGAAATATTTTGAGGAGCTCTTAAGGCTGGCTATAAACAAGACGGGAACTGATGAATGGGCTCTTACTAGAGT GGTAACAACTAGAGCTGAAGTTGATTTACAGAAAATTGCAGAGGAGTATCAAAAAAGAAATAGTGTTCCGCTGGACCGTG CAATCGCCAATGACACTTCTGGAGACTATCAGAAAATTCTTCTTGCTCTGATGGGACATGATGATTAA
Protein sequence (LotjaGi4g1v0397700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLKVPSQVPSPAEDSEQLRKAFQGWGTNEDLIISILAHRNAAQRKLIHETYSQTYGEDLLTDLDKELSSDFERAVVLW TLGPAERDAFLVNEATKRLTKNNWILMEIASTRSSLDLFKAKQAYQARFKRSIEEDVAYHTSGDIRKLLVPLVGTFRYDG DEVNMILAKSEAKLLHEKIAEKAYNHEDLLRVITTRSKAQLNATLNHYNNEFGNEIDKDLETDSDDEYLNLLRATIKSLT YPEKYFEELLRLAINKTGTDEWALTRVVTTRAEVDLQKIAEEYQKRNSVPLDRAIANDTSGDYQKILLALMGHDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 315 | 315 | 8.0E-163 | – | |
| PANTHER | 1 | 315 | 315 | 8.0E-163 | – | |
| Gene3D | 1 | 82 | 82 | 3.0E-27 | ||
| SUPERFAMILY | 2 | 315 | 314 | 1.7E-104 | ||
| ProSiteProfiles | 11 | 82 | 72 | 26.113 | – | |
| Pfam | 16 | 79 | 64 | 1.7E-21 | ||
| PRINTS | 25 | 47 | 23 | 1.4E-22 | ||
| SMART | 28 | 80 | 53 | 2.1E-20 | ||
| PRINTS | 65 | 81 | 17 | 1.4E-22 | ||
| ProSiteProfiles | 83 | 154 | 72 | 22.556 | – | |
| Gene3D | 83 | 153 | 71 | 3.7E-18 | ||
| Pfam | 88 | 152 | 65 | 8.8E-14 | ||
| PRINTS | 92 | 113 | 22 | 1.4E-22 | ||
| SMART | 100 | 152 | 53 | 1.5E-13 | ||
| PRINTS | 119 | 133 | 15 | 4.4E-23 | ||
| PRINTS | 161 | 181 | 21 | 4.4E-23 | ||
| Gene3D | 165 | 240 | 76 | 1.2E-16 | ||
| ProSiteProfiles | 166 | 237 | 72 | 18.646 | – | |
| Pfam | 171 | 233 | 63 | 1.5E-10 | ||
| SMART | 183 | 231 | 49 | 1.1 | ||
| PRINTS | 226 | 244 | 19 | 4.4E-23 | ||
| ProSiteProfiles | 241 | 312 | 72 | 26.052 | – | |
| Gene3D | 242 | 314 | 73 | 5.8E-27 | ||
| Pfam | 245 | 310 | 66 | 1.3E-19 | ||
| PRINTS | 254 | 274 | 21 | 1.4E-22 | ||
| SMART | 258 | 310 | 53 | 3.2E-22 | ||
| ProSitePatterns | 258 | 310 | 53 | - | ||
| PRINTS | 298 | 311 | 14 | 1.4E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi4g1v0397700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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