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LotjaGi4g1v0398800.1

Overview

Field Value
Gene ID LotjaGi4g1v0398800
Transcript ID LotjaGi4g1v0398800.1
Lotus japonicus genome version Gifu v1.2
Description Lipoxygenase domain-containing 1; TAIR: AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein; Swiss-Prot: sp|Q9SIE7|PLAT2_ARATH PLAT domain-containing protein 2; TrEMBL-Plants: tr|I3T598|I3T598_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0398800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:77624145..77633777) extracted from Lotus japonicus Gifu genome v1.2.

ATCAACAATGCCCCTACGACTTTCCTCACCACAACACAACACAACACAACACACCACACCACACCACACCACTGTGATGC AAAATGGCATCCACCACAGCCTTCATCGCTCTCCTCGTTCTGCTCTCACTCTCCTTCGCCGGAACCGCTAGATCCGTAAG AACACCTCTATCTCTCTCTCTCTCCGATCTCCCTCCTTCATTCCAATCTCATTTTTTATATACTCTCTGAATTTCAATGC AGGGCTCCGACGACGCCGATTGCGTCTACACCGTCTACGTCCGCACCGGCTCAGTCCTCAAGGGCGGAACCGACTCCAAG ATCGGAATCAAGCTATACGACAAGTACGGCTACTACATCTACATCAAGAATCTTGAATCCTGGGGTGGTTTGATGGGTTC CGGCTACAACTACTTCGAGCGCGGCAACCTTGACATCTTCAGCGGAAGGGGGCCATGTCTCGAAGCACCTGTCTGCGCCG TCAATGTCACCTCCGACGGCTACGGTGACCACCACGGCTGGTATGCCAACTACGTCGAGGTTACTTCCACTGGGGCCCAC ATCTCATGTTCTCAGGAGCAGTTTGAGATTGAGCAGTGGCTCGCTACTGATACAAGCCCGTATCAGCTCTGGGCTGTCAG GAACTATTGTCGTAATAGCTTGGATCAGGCCCGGCTTAAAACCGGTCACGAGGTTCGGACCCGATCTGAATCCGGATCCG GACATGCACAAGCGTGAGTGAGTGAGTGGGAGAAGAATGTGTGTTTGTTATGTTGTGAGTGAGTGAGTCTGTAATTTTGT TAGCATTGTTGTTGGATGTTCCAGATCATCATTGCCCAACTTGAATTGGGCACCGGGTAGCTGACAACCCGTTTTGTCTT TGTATTCTTCAATAATTATGGTACTATCTATATCAATGCCATATCAATGCCTAGTAGGTGTTCTGGATTAATACTATGGT TAATGGTGACATGGTGTCAAGCTATTTATCACTTTCAATCCAAATAGGCACATGCACCAACAAGATCAAGCAAAACTGAT CGATTTAAGGATTGGAGAAAGATTTGTTAGGAGAAAGTTGTTAACTTAATATGATTTCTGAGTCTCAAGACAATTCATCT CATGGTTGTCGGGTGTGAAAGATACTGCTTAAAATCAAGTAAACTGATATGCTTCTTTCTCTTTTAGACTTTTCTAAAAT GTAAAATGAGATTAACATTGTGTTTGGTTGCATTGCGTGTTACAAAAACCACGTCCAGCCATAAAGCCAAAGGTTCACTT CAAAGCTCCCCTTTGTCCCTTTGTAGCTTTAAGAAAAAAGTGCCTCAACTTTCAAGAGAACTTTATTACTGAACATACAC TAAGCACACCTATTTGGCATCAAAATTGACATTTGCAGCATCTGAGTATGTTCTGTTTTCAGTTGAAGGCAGATTCAACT AACATATTTGACTTAAAAAAAGAGTTTTGATTGTCAATTCGATTTTCTGACCCAACTTGTCAGCTCGGATTTAGAAAAAA GAAGCAAAGAACCCCGTCCAAGTTATTGGTAATGAGCATACACCAACAATCTAACCCAGCATTAGCAACCTTACTGCCTA TTTTAAATGAGTATTCATCTTAAGAGTTTCCTCTCCAAAAATAGCTGGTTTTCTTCATGTCATTGTTGAAAGGTATCAAA ACAAGGACAAAACTTAAAACAATCCCATTGACATTTCCGGAAAGCATGTAATTTCTTAAAAGACTAAACATCACTAAAAA AATCTCTTGACTTTTACCCCCTGAAATACAATCACTGAATATCACAATTAGGGATGAGAGAAAAAATGAAATTCTCTTTG TGCCACAGCTTAAAAATGTTCCGCATTAGAAAAAAGTGGTGAATTTAAGCAGTAAGTTTCTACTCTAAAGCATCAAGAAG GTTTTTTGTTCAACTCTTTCCATATAGCTTCTGACAACTGCTCTGCATTATACTCGATTCCGAAGCATCTGGCTACCTCC ATTTTTGGGTTCAACAAATACCTGATTGTGTAACAACTTACATCTATGTTAAGTGCAACCATACAGAAGTAGTACTATAG AAGGATACATGAGGGTAGAACAAGGGCTTACATGCTGTGGGAAATGTCAACAAGATAATCATCACCATCCTCTTCTACCT TTTTAAAATAAACACGATATTCTTGTGCCATCTGCCTAACAGCAGCGACGGGTCCAGTTAATCCTATGATTCTCGAATCA AATTCTGCAGTACATGTGGATTAGATGGACAGGGGAACAAGAAAAGTTAATAGTGCCAAATAAATTGACGGGGAGGGGGA GGGTAGAACATAAATCATCATTGGAAAGAAGCAAAAGTTTCAGTAATTGTAAATTATGATAGTATTGGCACCAAGACAAT CTAACCTTTAAGGTATGCACGAAGTTGTGAGGGAGAATCACGTTGAGGATCAATTGTAACAAATACTGGCAGGATCTTAA GATTCTGTTTTGATTCTTGATCGAAATAAAATACACAATGTTAAGGTATATCCAGAAAAGAAACTTATAATACAGCAAAC TGAGATAGAAGGGCCAAACCTAATATATCAATTGCCTTGGCCATGAGGTGGACTTGCTCTGGTCCAATATCAGGGGATGA GGTATAGCCAAAGTAAAGGAGGACCCATTTCCCAAGAAAAGTACGTTCTGTAACAGGTTCCTTTTCTGTATTAATTAGTG TAAAGGGACCCCCAATTATGGGTCCATTGGCAACATTTGCAATTTGGCTACTACCCTGATGACCTGATACAACAAATAGA GCAGTCAGGACAATGAACATAAAATATCGTTTCAAACTTATGTTGGGATCACACTAATCAAATAATCCACCAAACTTTGG TGTGTAAAATTGAAAATTGAGAACTCCAAAATGAAAAACTGTGCCATTTCAAGCAGAAGTATTAAGTGATTCCACAAATA ATCATGGATAAGAATAAAGACATATAGTAGATTATGCATGGATCTTGCAAAGTATTGGCTTGATCCTCTCAACTGCTTGG TTTACTTTTGCAAGTCATGGATCAATTTAGGCAAAACAATTCTGATCCAAATCATAAAGCAATGGTGAACTTGGATCTAT ACCAAGCTCCAGCTTCAAATCCGAACCCCAATTTGGCAATTTCAAGCACAGTAGACCCATAAGAAGAAGAGAAACAATTT TAGGAAAAAAATAATGGATCCAAAATTAGAAGTAGCAACTAATGATGTCATGGACACTTCCTGTAAATATATTTGATTGT ACAGCTCATAATCAATGGGACTAATCTGATATCAAAATTGCAAGATATTAGAATACAGACCTAACATTCTACTTAGATTT TATATTCTTGATATACTAGGTATCATCATCAAAGCATATGTAGCTCACTGGTAACTGGCTGATACATATGAAGAACAAAA TAGAAACACTTCATTTTTTACGCCTAAATTTGAAGTTTCGAAAACAGCACAAAACCAAGCTATGTTAAAAGACAAATCAA GCATCTAGCTGGATGTATTGTCTAGCGTAGTAAAATCCCTCCTCAAATACACAGATTCATGTGAGTCATCATCAAAAGAC GCTAAAAGTGATTTGAGTAGATTTGGCTTATAGTCATGACTCATGATCCAAACCTCAATGATTAGTAAATAATAAAACTA AGTGAGAGCAAAAGATATATAGCACTTAATTACATATGCCAGGTGAAAGATATATTATGAAAGTTTTCAATCTGCAATAT CTTTGGTATGCTTGTTTGAATGGATTTAACAGCTTCCTACAAAAATAAAACAATTAGGGAATGCTTCTGAAATAAGTTCC AACTACAAACTAAAAAATTACAACCAGTGTTTTAATCACTTATAAGGATTGCTAGCAACACACTCAATTGAACACAATCT CACTCACTCTCTATGGTTGGTCTTTTTACAAAATAGTCAACATATTTCTCTCAATTATTACAAAATGTGGGGGTGTTTAC TTCTTAAAAATTAAACCAATCATGTTGAAGTGTGTTGCTAGAAATTCTCTTATAGTCTGAGACTCTAACTTTCTATTAAC ATTACCACAAATCACAAATGATATTATCATATTACTATCAGAAATCGGCCAAAATTCCCTTCTGTGCATCCAACTGCACT GAGAAGCAAACATGTCTAGCAACAAAGTAATCTGACAAAATTCCACATAATAAATCATACACCATCTATCGATGACTGAT GTACTCATCTACTAATGAACTTCCTGCTTCTTAATATAACGACAGAAAGAAAGGAAATCAAACTCTACAGATGATGCAGA AGAATAAACACAAGGGCATAACAATACAAGGAGACTTATGGATAAAATTTAACACATGTCCCCAAATATTTGTACTTCAT TCCCTTAAAAATAAGTCAAATAAAAATTTTAGATTGTAAATAGTTAATACCTTTTGGAACAGCTCTCCTCTCATCATTAT AATGAAAAAATGCTGCAATCCCAGCAAATCCTAAAACAGCAGCTGGCTGCAGCAAAATCAAAATTGGAAATGAAAAACTA GCATCCAATCTACTTGAAACAACATAAGTACCCTATGAGATTGCTATATATCAATCAAATAATACTAATAACAGGAAAAA CAAAAGGAAAAAGGGAAACATACAATAATATAAGCACCCCATGAGCGAGAAGGGTGTGAAGAGTGCGATTCTGGAGAGAA TCGAGGATGGAGCTCGTATTTTGGTTTACCCTGTTGTGTAGAATTCGTGTAGCTAACAGATTGAGTTGTCTTAGATGGAA CAGACCTATCACAGAGAAAAAAAAAGCATAACACCAATAAAACCCCCAAATTGAAATTCAAATACTGATTAAGGGTTTTG GAAATGGAAACTAACCTTCGAAGAAGAATGAGAGTTTGTCGAGTGGAACGTAGCTTGGATGAAGAGAGTATAAACCTCGG AATGGACATGACTATGGCTAAGGAAAACTGAAGACAGTGCAACTATGTTGTTGTAAGAAAAACAATGAAGGAAAGGGTTT TGTGTTAAAGTAAAACCCATGTCATTGCAAAAATTGCTTGTTCTCCAAGCTCATTCATTCAATTTTGCTGGTACCAGTTT GTTTGTGTTGTGTGTTTTGAATTCGATTCATTCATCCAATTCTAGTATGACTCTGACCAGACTATATCATCTCTGGATCG GTTCAGTGTTTCCTTTTTGCAACATTGATTAATACTCATTGTTTCATGGGCCACAAAGATAGCAGATTTTGCAGCCTTAG ATTTTCCAACACTTCTCACTTGGGCCTCTCTAGTCCTAGGCTTTAGATGTTTTTTTTTGTGATTGGGAAAATTAAAACAC TTCGTCCAAAAAAAAAAAATTAAAACACCAAAACAACTATATGCCTACCGAGGAGTGAAGGCCGAGCCAAGCTAGGGTTT GAGCGATACGAACCTAACCTGCAATATAATTATACGGCTCATGCCCGACGTGTGACCTGTCGTAGGCCAAATTTTAAGGT CTGACCTGGCTTTTTTTATAGTTTGGCATGACCTATTAGAGCATCTCCAATGGAGTCTTTATTTTGGGACCTTAAAATAA GATCCGGATCTTATTAAATCTCACCATTGGAGCTATCCTACATGACATGAGATCTTAGCAAAAGCTAAGATCCGTGCCTT AGCTCAAGTACTCTCAAATGTGGGATCTTAAATAAAATAATATTTTTTTCTCTCTCCTTCAATATCATAACCAAAGTAAA AATTAGGGAGAAAAATAAATAGTATAAATATATTAGGTACCGTGGGTCCAGTCAAAAGTAAAATAAGATCTCAACCACTA GAGTGAAATGTGCATGAAGACCTTATGAGTGTCTTAAATCCTATGTGACAATTTGGGCCCACAAAAATTGAGTTAAGTCC CAAAATAAGTTCCTACCATTGGAGATGCTCTTAATCTTTTATCCGGCTTTCTGTTGGGATTTAGTTTAGCATGGAATAAT GTATTTTGCAGGAGGCTTGAAACCTAAAAGAATGATTGGACAGTAAAAAGTTAACACCCATAAAATTGTTTGATTGTTCA CAAAAAAAATCTCCAGTAACAATAAACACATTGAATCAAAATCATATCGTGTTAGTGAATCAAAAGTTGCATTAAAAGGA GCTAAACTTATATTGGTGAAGAAGAATATGAATTCTTAAAGAAGAGATGAAAATAGTCCCTAATCGATCTGGATAGAAAT TTGTAAGAAATAAAACACACGTGGGTGCAAAATTGATGTGGCCATTGTGAATTGGGGAAATTTTCATGATAAGGGAATAC TATCACTATTGTGTTCTTTATTATGTTATCTTTTGCATGATTTTTTTTTTCATGTTAGTTTTCAAAACACCTCACTTGTT CAGGTTTTCTTATTCAATTGACTAGCCTTCAATTGGAACTTTAATAAGGTGATCCAAGCTGCTTGGTGGATCAAGCCTCC GTGTAAATACACTATGAAAATTACTATAAATTCTACTTCCTTTTAGAAGCTACAGGTTAGAGACATGTAAACTATAAAAG AAGCACAACACCTAACGTTAGAAGAGAGGATTACAGCGCAAGAAAAACAATCCAATTGAGATTTCCAGAAAGCAAGTAGT TTCTTAAAATGTTAACATCACTAAAACAAAATCTCTTGCCTTCTACACCCTGAAAAACGATCACTAAATATCACCATTAG ATACAAGGATGATCATTGTTCAACAAAAGCTTAAAAATGTTCCGTATGAGAAAAGTGGTGAATTTAAACAGCAAGTTTCT ACTCTAAACTCTAAAGTCCAAACTCCAAAGCATCAAGAAGGATTTTTATTCAACTCTTTCCATATGGCTTCTGAGTTCTG GCAACTACTGCATTCTACTCGACTCTGAAGCATTCTTTTACCTCCATCCTTGGGTTCAAGAAAAACCTGATTGTTTTCAC AGAGGTTATATCTATGTTAAGTACAACCATGAAGAACTATAGGAGGATGCATGAGGGTAGAACAAGGGCTTACAAGTTTT TGGAAATGTCAACAAGATAATCGTCACCATCCTCTTCTACCTTTTCAGAATAAACATGATATTCTTGTGCCATCTGCCTA ACAGCAGCGACGGGTCCAGTTAATCCTATGATTCTCGAATCAAATACTGCAGTACATGTGACCAGTTGGACAGTCGGGCA AGAAAAGTTAATAAGGCCAAATAAATTGAGGGGGAGGGTAGAACATAAAACATCATTGACAGGAGCCAAAAGTTTCAGTA ATTGGAAATTATAATATTTTTGCAACCAAGACAACCTAACCTTTAAGGTATGCACGAATTTGTGAGGGAGTATCACGTTG AGGATCAATGCTAACAAATACCGGCAGAACCTTAACCTTATGTTTTGATTCTTGATCAACATAAAATACATAATGTTAAG GTAAATCCAGAAAAGAAAATTATAATACAGAAAACTGAGATAGAAGGGCCAAACCTAATATATCAATGATCATGCTCATA AGGAGGAGTTGCGCCGGTCCAATATCAGGGGACGAGGTATAGCCAAAGTAAAGGAGGACCCATTTCCCAAGAAAATCACG TTCTGTAACTGTTTGATTTTCTGTATTAGTTAGTGTAAAGGGACCACCCCTAATTTTGGGTCTATTGGCATGACCTGATC CAACGAATAGAGCAGTCAGGACAATGAACATGAAATATCCTCTCAAACTTATGTTGGGATCACACTTGATCAAATAACCC ACCAAGCTATGGTGTGTAAAATTGAAAATTGAGAACTCCAAAATTCAGAAAGTATCCATTTCAACCAGAATTCACTATTG ATTCCACAAATAGTCATGGATAAGAATAAAGACATTTAGTAGATTATGCATGGGTCTTACAAAGTATTACTTGATCCTCT CAAGTCTCAACTGCATGATTTTCGTTTGCAAGTCATGGATCAATTTAGACAAAACAATTCTGACCAAATCATAAAGCAAT GGAACTCATCTATCCCCAGCTCCTGATTCACCCAATTTGTAACACAGTAGACCCATGAAAAGAAGAGATACAGTTTTAGG AAAACAATAATGGATCCAGAATAAGAAGTACCAACTAGCAACCAATGATGTCATGGACACTTCCTGTGTGAATATTCAAT TGGACAACTCATCATCAATGGGACTAATCTGATAGCAAAGTTAGATATTAGGATATGGACCTCACAAAGTCACCAAGGAA GGTTAAAAGAGAAATCAAGCATCTAGCGGGATGTGTTTGTTGTCAAGCGATTTAATAAAAACCCTCCCCAAATACACAGG TTCATGTGACTGTAAGTACTCATAAAATGACACTAAAAGTGACCTGGGTAGACTTGGCATGCAGTCATGATTCATGATCC AAAATTTAATGGTTACTATGTAATATAACTAGGTAAGAGCAAAAGATATATAGCTCCTTATTTCTAGACACTGATCACCA CCCCACATATGTAATGCAAAAGATTGTATTATGGAAGTTTTCAATCTGAAATATGTTTGGCATGACTGTTTGAATGGATT TAACAGCTTGCTATAAAAATAAAACAATCAGGGCATACTTCTGAAATAAGTTCCAACAACATATGAACTTCACCGATACA AACTTAAAAAAACTACAACCAGTAATACATATCACTTATAGTGTGAGACCCCCTCTAACCCTCTTTTATCAGTACCACAA ATGATATTACTATCAGAAGTCTGTCAAAATTCCCTTTTGTGCATGCAACTGCACTGAGAAGCCAATATGTGTAGCCACAA TCTAATGCGACAAAATTCCACATAATAAATCTGATAGGAAGAAATTTCATGTCAAGTTATAGATCTAGAACAAAATTGCA GAAAAGTACAGAAACAAAACAAATTGGTAAAGCAAATAGCTAAATTTTCTTCATGTCATTTTCACTTCATCAGTTTTCTA TTTATCTAGTTGATGGATTCCATAAATCAAGGGGAACTGCACATGTGTCATGTATCTAATGGAGGTTCTCTAACAAGGGA ACGGTCTAGAATCAGTAAATAACAAGCGTATGAATTGAGCATAGCTGCTAAGTATTTGGGCTTAACAGCTCTTCTTTTGG GCCTGCTGGCCAATGATTCAGAAATACTATCAAAATCATACACCATCTTACAATGTGTTATCTATTACTGAGCTTCCTGC TTTATTAATATAAGGAAAGAGAGAAAGAAAATCACACTCTACCGATGATGCAGAAGAATAAATACAAAGGGGACTTGTTG AGAAAAATAAACACCTTTCCCCAAACACTTGAACTTGAGACTCTTTAAAGTGAATGAGTTGAGATCATTGTAATGAAAAA ATGCTGCAAGCCCAGCAAATCCAACAACAGCAGCTGACTGCAGCAAAATCAAAATAGGAAATGAAAAACTAGCATCTAAT CTTACTTGAAACAACATAAACAACTAGGCAGCAACATAAGTACCCTATGACATTGTCACATAACAACAATAACAGAAGAA AGAAAGGAAAAAGGGGAACATACAATAACATAAGCACCCCATGAGCGAGAAGAGTGGGATTCAGCAGAGTTCCTGTAGCT AGCAGATTGTGTTGTCCTAGAGGGAACAGACCT 

CDS sequence (LotjaGi4g1v0398800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCCACCACAGCCTTCATCGCTCTCCTCGTTCTGCTCTCACTCTCCTTCGCCGGAACCGCTAGATCCGGCTCCGA CGACGCCGATTGCGTCTACACCGTCTACGTCCGCACCGGCTCAGTCCTCAAGGGCGGAACCGACTCCAAGATCGGAATCA AGCTATACGACAAGTACGGCTACTACATCTACATCAAGAATCTTGAATCCTGGGGTGGTTTGATGGGTTCCGGCTACAAC TACTTCGAGCGCGGCAACCTTGACATCTTCAGCGGAAGGGGGCCATGTCTCGAAGCACCTGTCTGCGCCGTCAATGTCAC CTCCGACGGCTACGGTGACCACCACGGCTGGTATGCCAACTACGTCGAGGTTACTTCCACTGGGGCCCACATCTCATGTT CTCAGGAGCAGTTTGAGATTGAGCAGTGGCTCGCTACTGATACAAGCCCGTATCAGCTCTGGGCTGTCAGGAACTATTGT CGTAATAGCTTGGATCAGGCCCGGCTTAAAACCGGTCACGAGGTTCGGACCCGATCTGAATCCGGATCCGGACATGCACA AGCGTGA 

Protein sequence (LotjaGi4g1v0398800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASTTAFIALLVLLSLSFAGTARSGSDDADCVYTVYVRTGSVLKGGTDSKIGIKLYDKYGYYIYIKNLESWGGLMGSGYN YFERGNLDIFSGRGPCLEAPVCAVNVTSDGYGDHHGWYANYVEVTSTGAHISCSQEQFEIEQWLATDTSPYQLWAVRNYC RNSLDQARLKTGHEVRTRSESGSGHAQA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 24 24 -
SignalP_EUK 1 24 24 -
SignalP_GRAM_POSITIVE 1 24 24 -
PANTHER 1 184 184 1.2E-104
Phobius 1 4 4 -
PANTHER 1 184 184 1.2E-104
SignalP_GRAM_NEGATIVE 1 24 24 -
Phobius 5 16 12 -
Phobius 17 24 8 -
Phobius 25 188 164 -
CDD 31 158 128 1.35135E-74
Gene3D 31 152 122 1.6E-16
ProSiteProfiles 31 158 128 22.061
SUPERFAMILY 32 149 118 5.04E-24
Pfam 33 151 119 4.7E-12

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0398800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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