Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036392
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.565s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0772900.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|I1JRC2|I1JRC2_SOYBN Lipoxygenase; Found in the gene: LotjaGi1g1v0772900 LjG1.1_chr1 134586845 134595265 -
2 domain predictions
1 GO term
LotjaGi2g1v0155000.1
n.a. Embryo-specific 3; TAIR: AT5G62200.1 Embryo-specific protein 3, (ATS3); Swiss-Prot: sp|Q6NPM5|ATS3B_ARATH Embryo-specific protein ATS3B; TrEMBL-Plants: tr|I3SY26|I3SY26_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0155000 LjG1.1_chr2 55282415 55285124 -
2 domain predictions
1 GO term
LotjaGi3g1v0009500.1
n.a. Embryo-specific 3; TAIR: AT5G62200.1 Embryo-specific protein 3, (ATS3); Swiss-Prot: sp|Q6NPM5|ATS3B_ARATH Embryo-specific protein ATS3B; TrEMBL-Plants: tr|I3SQJ1|I3SQJ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0009500 LjG1.1_chr3 1068594 1071615 +
2 domain predictions
1 GO term
LotjaGi3g1v0011300.1
n.a. Embryo-specific 3; TAIR: AT5G62200.1 Embryo-specific protein 3, (ATS3); Swiss-Prot: sp|Q6NPM5|ATS3B_ARATH Embryo-specific protein ATS3B; TrEMBL-Plants: tr|I3SN54|I3SN54_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0011300 LjG1.1_chr3 1248459 1250428 -
2 domain predictions
1 GO term
LotjaGi3g1v0028300.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7IS30|G7IS30_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028300 LjG1.1_chr3 3094538 3099686 +
2 domain predictions
1 GO term
LotjaGi3g1v0028600.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P14856|LOX2_PEA Seed linoleate 9S-lipoxygenase-2; TrEMBL-Plants: tr|G7IS29|G7IS29_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0028600 LjG1.1_chr3 3146179 3152287 -
2 domain predictions
1 GO term
LotjaGi3g1v0274700.1
n.a. Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|I1JMA5|I1JMA5_SOYBN Lipoxygenase; Found in the gene: LotjaGi3g1v0274700 LjG1.1_chr3 54104923 54143847 -
2 domain predictions
1 GO term
LotjaGi3g1v0413600.1
n.a. Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 LjG1.1_chr3 81805539 81811833 +
2 domain predictions
1 GO term
LotjaGi3g1v0413600.2
n.a. Lipoxygenase; TAIR: AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|Q93YA9|Q93YA9_SESRO Lipoxygenase; Found in the gene: LotjaGi3g1v0413600 LjG1.1_chr3 81805832 81810912 +
2 domain predictions
1 GO term
LotjaGi3g1v0419600.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|O24470|O24470_PEA Lipoxygenase; Found in the gene: LotjaGi3g1v0419600 LjG1.1_chr3 82699287 82706307 +
2 domain predictions
1 GO term
LotjaGi3g1v0419800.2
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|A0A151T9A0|A0A151T9A0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0419800 LjG1.1_chr3 82732189 82739942 +
2 domain predictions
1 GO term
LotjaGi3g1v0420000.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420000 LjG1.1_chr3 82781887 82787226 +
2 domain predictions
1 GO term
LotjaGi3g1v0420100.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P24095|LOXX_SOYBN Seed linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|G7LIZ7|G7LIZ7_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420100 LjG1.1_chr3 82793748 82799532 +
2 domain predictions
1 GO term
LotjaGi3g1v0420400.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P38414|LOX1_LENCU Linoleate 9S-lipoxygenase; TrEMBL-Plants: tr|I1KUQ6|I1KUQ6_SOYBN Lipoxygenase; Found in the gene: LotjaGi3g1v0420400 LjG1.1_chr3 82831101 82837402 +
2 domain predictions
1 GO term
LotjaGi3g1v0420500.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09918|LOX3_PEA Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420500 LjG1.1_chr3 82851111 82857611 +
2 domain predictions
1 GO term
LotjaGi3g1v0420800.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|P09186|LOX3_SOYBN Seed linoleate 9S-lipoxygenase-3; TrEMBL-Plants: tr|G7LI99|G7LI99_MEDTR Lipoxygenase; Found in the gene: LotjaGi3g1v0420800 LjG1.1_chr3 82927325 82937329 +
2 domain predictions
1 GO term
LotjaGi3g1v0496800.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMH0|A0A151TMH0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496800 LjG1.1_chr3 91485904 91496522 +
2 domain predictions
1 GO term
LotjaGi3g1v0496900.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMJ6|A0A151TMJ6_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496900 LjG1.1_chr3 91530645 91540490 +
2 domain predictions
1 GO term
LotjaGi3g1v0552700.1
n.a. Lipoxygenase domain-containing 1; TAIR: AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein; Swiss-Prot: sp|O65660|PLAT1_ARATH PLAT domain-containing protein 1; TrEMBL-Plants: tr|A0A072UI52|A0A072UI52_MEDTR PLAT-plant-stress protein; Found in the gene: LotjaGi3g1v0552700 LjG1.1_chr3 97031348 97032753 -
2 domain predictions
1 GO term
LotjaGi4g1v0398800.1
n.a. Lipoxygenase domain-containing 1; TAIR: AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein; Swiss-Prot: sp|Q9SIE7|PLAT2_ARATH PLAT domain-containing protein 2; TrEMBL-Plants: tr|I3T598|I3T598_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0398800 LjG1.1_chr4 77624145 77633777 -
2 domain predictions
1 GO term
LotjaGi5g1v0221100.1
n.a. Lipoxygenase; TAIR: AT1G55020.1 lipoxygenase 1; Swiss-Prot: sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5; TrEMBL-Plants: tr|V7BGT3|V7BGT3_PHAVU Lipoxygenase; Found in the gene: LotjaGi5g1v0221100 LjG1.1_chr5 52736165 52742900 +
2 domain predictions
1 GO term
LotjaGi5g1v0308100.1
n.a. Embryo-specific 3; TAIR: AT5G62200.1 Embryo-specific protein 3, (ATS3); Swiss-Prot: sp|Q6NPM5|ATS3B_ARATH Embryo-specific protein ATS3B; TrEMBL-Plants: tr|C6SVI7|C6SVI7_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0308100 LjG1.1_chr5 62591430 62598661 -
2 domain predictions
1 GO term
LotjaGi5g1v0314800.3
n.a. Lipoxygenase; TAIR: AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein; Swiss-Prot: sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic; TrEMBL-Plants: tr|G7ID71|G7ID71_MEDTR Lipoxygenase; Found in the gene: LotjaGi5g1v0314800 LjG1.1_chr5 63295674 63303438 -
2 domain predictions
1 GO term
LotjaGi6g1v0086500.1
n.a. Lipoxygenase domain-containing 1; TAIR: AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein; Swiss-Prot: sp|Q9SIE7|PLAT2_ARATH PLAT domain-containing protein 2; TrEMBL-Plants: tr|I3T7H1|I3T7H1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0086500 LjG1.1_chr6 17438970 17440365 +
2 domain predictions
1 GO term
LotjaGi6g1v0195200.1
n.a. Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A072VA97|A0A072VA97_MEDTR Linoleate 13S-lipoxygenase 2-1, related protein; Found in the gene: LotjaGi6g1v0195200 LjG1.1_chr6 49165524 49170618 +
2 domain predictions
1 GO term
LotjaGi6g1v0331700_LC.1
n.a. Lipoxygenase; TAIR: AT1G17420.1 lipoxygenase 3; Swiss-Prot: sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic; TrEMBL-Plants: tr|I1M240|I1M240_SOYBN Lipoxygenase; Found in the gene: LotjaGi6g1v0331700_LC LjG1.1_chr6 64665579 64667234 -
2 domain predictions
1 GO term