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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0409500 |
| Transcript ID | LotjaGi4g1v0409500.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Callose synthase; TAIR: AT2G13680.1 callose synthase 5; Swiss-Prot: sp|Q3B724|CALS5_ARATH Callose synthase 5; TrEMBL-Plants: tr|G7LE18|G7LE18_MEDTR Glucan synthase-like protein; Found in the gene: LotjaGi4g1v0409500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78549273..78554841) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAATTGGCAGAACTTAATCAAAGTAGTAAGGATACTGGACGTCAAATTTTTGCTGGTACTGAGGCAAAGCCTGCCGT GGTATTCCCTCCCGTGGTTACCGCACAATGGGAGGAGCAGGTACTTAGAATGTAATTTGATTTATAATTCTTAATTATTA TTATTATTATTATTATTATTATTATTATTATTATTATTATATGATCCAGAGGCTTCGATAACCAATGGATCATTATGGTC ATTTCAGATAAGACGTCTTTATCTACTCTTGACGGTGAAGGAATTAGCCAATGAGATTCCAACCAACAGTGAAGTACGTA GAAGGATTGCATTTTTTACCAATTCATTGTTCATGGACATGCCAACTGCTCCCCGAGTCCGTAAAATGCTCTCATTCAGG TCTTGTACAGTTTCATTGATACATATGGCCATGTAGATATATGTGTATGTTATGCTTGTAAATAAAATAAACTGCATAAA CTTCATGCTTCTATACTGTACACTACACTATGCAAATCAAATGTTCACATCATCATAATAAAGCTTTAGTGGCCAAATCG ATCAGGGTTATATGATGTTTTCTTTAGATTATGATGACTTCAACTACTGCAGGATTACTTTCATATATATATATATATAT ATATATATATTAGACACAAATTTTTTGTCAAGGAATTTCTTATGCTTAAAATTTGAAATGTTATGCCTTTAGCTTATATG GAGCCTTTTGCTTCTTCTTTTTAGTGTCCTCACTCCATACTACAGTGAAGAGACAGTATATTCTAAGAATGACATCGAGC TTGAGAATGAAGACGGCGTGTCAATCATATATTATCTGCAAAAGATATTCCCTGGTTCGTAATGACACAATTTAATTTGA ATGGCTATTTATTGATAATATAGAATGGATTGGCTGAAATTCAGTAACCTTACTAGATGAATGGAATAACTTCATGGAGC GAATTGATTGTAAAAAAGATAGTGAGATATGGGAGAAAGAAGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGA GGACAAACTCTTTGCAGGACAGGTAAATGATGGCTCCCTTTACCTTCCCTTCTTCTGCTTGGATTTGTTTGACTGATATT TTTCCTCTTTTACTTATAAACTGAGGTAGTTAGGGGAATGATGTACTACCGGCGGGCATTAAAGCTCCAAGCATTTCTTG ATATGGCTAATGAAAAAGGTAATACTTTGCTATATCTATAGCTACCAAGACATGCTTCTGGTTTATAGCTTTTTGTAAAG CCTGGGCCTTAAGTCGTGTCTTATGCATATATATACCTTTTAACACTTTAAAATTTCCTCACGAGTATGAAATCTGGTAA AAAGACTTGTCATATTCATCTTGGTGCCTGAAAAATGAGTAGTTAAATGCCAAGATGATTTCGTTTTTGTTTTTGTCCTG TGGTAGAGATACTTGATGGCTATAAAGCTATTACAGTTCCATCTGAGGAAGATAAAAAGAGTCAGAGATCTCTATATGCC AGTTTAGAGGCTATGGCTGATATGAAATTCACATACATTGCTACCTGTCAGAACTATGGAAATCAGAAGCGCAGCGGAGA CCGCCGTGCAACAGATATCCTGAATTTGATGGTTAAGTATGTTTTCTGAATTGAATTTTATAAGGATAATGTATATTTTG CTTTTAGTTTCCCAAGTTCACTTGATTGAAGAATCTAATTTTTGGTTCTTCATCTATAGCAATCCCTCACTTCGTGTTGC ATATATTGATGAGGTTGAAGAAAGGGAAGGTGGAAATGTACAGAAAGTGTATTATTCTGTGTTGATCAAAGCTGTGGACA ATATTGACCAAGTAAATGCATATTGATACCGAAACATAACAAATTACTAATGGTACCTTGCCTTTGAATTAACCATTTTT GCATCTTCCCTGAAGGAAATATTTCGAATAAAACTTCCTGGTCCAGCGAAGTTAGGAGAAGGGAAGCCTGAAAACCAAAA TCATGCCATCATTTTTACTAGAGGGGAGGCTCTTCAGGCTATTGACATGAACCAGGTAAAATATTATAAACTTAAGCCTT TCATAAAATGGAACTGGGTGTCAGGGCCTACTAAAAATGTGTGTCATTAATTTGAAATTTTTTTCTAGGACAATTACTTG GAAGAAGCTTTAAAAATGCGTAACCTGCTAGAAGAATTCAATAAGGATCATGGAATGCGCCCACCTACCATATTAGGTGT TCGTGAACATATCTTTACTGGAAGGTTATGATTTTTTTCTACATAGATCTAGCACATAGTCTTGTTTAGATCCTATATTA CTTAATTTTATCACCTGTTACAGTGTTTCTTCGTTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGG TCAAAGAGTTCTTGCAAGACCGCTGAAGTAAGTTTTTGTTTGTTTTGTTTTCTCATTATGCGGTTGACTTCTTAATGCTT GATTATCTTTTATGATAAACTATAACCACCCTTGAAACGCATGGCTAATAATATTAGACCTCTTCCCAAGATGAGGCTGC ATTTTAATTTAAGAGTGCAATGCATTTAAAATATTTTACACAGATCAGAGCATAGATGTTCCGGGTTCTGCTTACTATTG AATTTCTGCTGCATCCCACTCCTTCTTATTTGATTTTCTTGTTGGAGTGTCATTTCATTTTTTGGTGACAATAATCAGTG AACAGTGAACTACTGAATTTTCCTTCTGCTATCTCCAGCCGTTAAGAAAAAATAAGCATAAATTAGTCAGAATTGATATT TTCTGGCCCCTGCATTACAATTGATGTTTTCAATTGTAGAGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAA TCTTCCATTTTACTCGTGGTGGAGTCAGCAAGGCTTCTCGTGGTATCAATCTGAGCGAGGATATATTTGCTGGTAACATT CTTGATGCATTTTTTTTTTTAATATTTGATTTGATATTTCTATCTCTCATCATATGCCTTTGCCGCGTATTCAGGATTCA ACTCAACATTAAGACGTGGGAATATTACCCATCATGAATATATCCAAGTCGGAAAGGGTAGAGATGTTGGGCTCAATCAA ATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAACAGACACTTAGCAGGGATATCTACCGACTGGGGCATCG ATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACTGTGGGATTTTATGTCAGCTCAATGGTAAGGCTCAGTGCTT TTGAATCAAGTGAAATATACTGAATATCTTTTTTACCAATATTTTCAGGAAATTTGGTTATCTAAATCTACCATATGCTA TATTTAAGAAGACATAAATCAAGAATAATGGGTATGGAAAATAATCATCACTTAAACTTTATTAAAAGTTCGCCCTATAA GTTGCAAGTATACCCTGCTTATTGGTTATAAATTTATAATGAGTTTGGTTCACCTTAATGAAAAACCATAGGTGTTGGAG AATTTTATCCAACCAACTCAACTCGAATTAATTGGCTTCCAAAGTAGCTTAGGGTCGCCTACAAAAACTCCTGCATCTAA CTCTAAGCTTTCTTCTGCTGTTGACAGTTGGTGGTTCTCACTGTTTATGCTTTCCTATATGGCAAACTTTACCTGTCATT GAGTGGATTTGAGGCTGCTATAGTTAAGTTCGCTAGAAGGAAGGGAGACGATCCTTTAAAGGCAGCAATGGCTTCACAGT CCCTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGGCTAGAGAGAGGGTTCAGAACTGCAGTC GTTGACGTCATAATAATGCAGCTGCAGCTGGCACCCGTTTTCTTTACCTTTTCACTTGGGACGAAGATGCACTATTTTGG GCGCACTCTCCTGCATGGAGGGGCAAAGTACCGAGCAACAGGTCGTGGTTTTGTAGTTCGTCATGAGAAGTTTGCGGAAA ACTACAGGCTGTACTCTAGGAGTCACTTCGTAAAAGGGATAGAGCTAACTATACTGCTTATATGTTACAAAATTTATGGA TCAGCAACTCCTGATTCAACAGCATATACTCTTCTCTCATGTTCAATGTGGTTTTTGGTGTGTTCTTGGCTGTTCAGCCC TTTCCTTTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAAGACTTTGATGATTGGACAAAATGGATAACTAGTC GAGGTGGTATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGTACACTGGG ATTTTGGGGCAGATTTGGGAGGTTGTTCTTGCCCTGCGTTTCTTTGTCTATCAGTACGGGATCGTGTATCATCTACACGT AGCCAGGGGTGACCAGAGCATCATGGTAATTATGCTTGCCAATTTAATTTTACTTCACATTTTCTTGTCAAATTTGAACC TGCACCTCAGGCTTTAAACATGTATGATATATCCATATTATGTTATAATTTGCATTTTAGACAAAGATGTTCCTTGGTTA GAGAATGTAGTCCTTTACCAAGTAACACCTCTTTTGGTGAACAAAAAAACAGACATGGAGTACATACTACACATGGAGAA GAGCTTTCTAACCTCAAATTTATCTCCAGGTTTATGCTCTGTCCTGGATAGTCATATTAGCTGTCATGGTCATCTTGAAG GTCAGTTTTCAATTATCAAACAGTTCACTCTACATACAAGCATTTTCTGTGCTTGAACTTGATAATTATTCAATTAACTA ATTACTGACATACTTGCATCTGGAACTGCAGGTCGTGTCCATGGGTAGAAAGACATTCAGCGCAGATTTTCAGCTGATGT TTCGTCTCCTCAAAGTGCTTCTGTTTATAGGAACCATTGTTATTCTAGTCTTGTTGTTTACTCTACTTAGTCTCACTGTC GGAGACATCTTTGCGAGCCTCCTAGCATTCATGCCAACTGGTTGGGCATTGATACAGGTACTTATCTAATAGTCATTACC TCTGTCTTTAATGGAAATAATATCTCTTCAGTAAGATAGTCCCTTATGGTTTGTAGTCGTTACCCCGAGGTTCAGTCATT TATCTTTATTTGTGTCGTAATAAACAATAAGGTCCACTTGTGGAGGGAAAAGGTTTAAATGGAATATATATTTCTATATA TAAATCTCATAGTCAAGTAAATTAAGTTCTCTTTCTAAATTCATGATATTAGAAAAGTTCCCTCATGATATCTTTTGTTT TTATCTGTAAATCTTAAAACTATTTCTGCCTAATTTTCCTGGCTTTAAATGTGAGCAGATAGCTCAAGCGTGGAGGCCAG TGATAAAAGGCATTGGAATGTGGGGGTCTGTCAAGGCTTTATCAAGGGGGTATGAATACGTTATGGGAGTGGTTATCTTT GCGCCAATAGCGATATTAGCTTGGTTTCCATTTGTTTCAGAATTCCAAACTAGACTGCTATACAACCAAGCATTCAGCCG AGGGCTTCAAATCCAGCGCATTCTGTCTGGTGGCAAGAAGAATAAATAA
CDS sequence (LotjaGi4g1v0409500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAAGATACTTGATGGCTATAAAGCTATTACAGTTCCATCTGAGGAAGATAAAAAGAGTCAGAGATCTCTATATGC CAGTTTAGAGGCTATGGCTGATATGAAATTCACATACATTGCTACCTGTCAGAACTATGGAAATCAGAAGCGCAGCGGAG ACCGCCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAGGTTGAAGAA AGGGAAGGTGGAAATGTACAGAAAGTGTATTATTCTGTGTTGATCAAAGCTGTGGACAATATTGACCAAGAAATATTTCG AATAAAACTTCCTGGTCCAGCGAAGTTAGGAGAAGGGAAGCCTGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGG AGGCTCTTCAGGCTATTGACATGAACCAGGACAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTGCTAGAAGAATTC AATAAGGATCATGGAATGCGCCCACCTACCATATTAGGTGTTCGTGAACATATCTTTACTGGAAGTGTTTCTTCGTTGGC TTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCGCTGAAAGTTCGATTCC ACTATGGTCATCCGGATGTTTTTGATAGAATCTTCCATTTTACTCGTGGTGGAGTCAGCAAGGCTTCTCGTGGTATCAAT CTGAGCGAGGATATATTTGCTGGATTCAACTCAACATTAAGACGTGGGAATATTACCCATCATGAATATATCCAAGTCGG AAAGGGTAGAGATGTTGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAACAGACACTTA GCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACTGTGGGATTTTAT GTCAGCTCAATGTTGGTGGTTCTCACTGTTTATGCTTTCCTATATGGCAAACTTTACCTGTCATTGAGTGGATTTGAGGC TGCTATAGTTAAGTTCGCTAGAAGGAAGGGAGACGATCCTTTAAAGGCAGCAATGGCTTCACAGTCCCTTGTTCAAATAG GTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGGCTAGAGAGAGGGTTCAGAACTGCAGTCGTTGACGTCATAATA ATGCAGCTGCAGCTGGCACCCGTTTTCTTTACCTTTTCACTTGGGACGAAGATGCACTATTTTGGGCGCACTCTCCTGCA TGGAGGGGCAAAGTACCGAGCAACAGGTCGTGGTTTTGTAGTTCGTCATGAGAAGTTTGCGGAAAACTACAGGCTGTACT CTAGGAGTCACTTCGTAAAAGGGATAGAGCTAACTATACTGCTTATATGTTACAAAATTTATGGATCAGCAACTCCTGAT TCAACAGCATATACTCTTCTCTCATGTTCAATGTGGTTTTTGGTGTGTTCTTGGCTGTTCAGCCCTTTCCTTTTTAATCC ATCAGGATTTGAGTGGCAGAAGATAGTTGAAGACTTTGATGATTGGACAAAATGGATAACTAGTCGAGGTGGTATTGGTG TTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGTACACTGGGATTTTGGGGCAGATT TGGGAGGTTGTTCTTGCCCTGCGTTTCTTTGTCTATCAGTACGGGATCGTGTATCATCTACACGTAGCCAGGGGTGACCA GAGCATCATGGTTTATGCTCTGTCCTGGATAGTCATATTAGCTGTCATGGTCATCTTGAAGGTCGTGTCCATGGGTAGAA AGACATTCAGCGCAGATTTTCAGCTGATGTTTCGTCTCCTCAAAGTGCTTCTGTTTATAGGAACCATTGTTATTCTAGTC TTGTTGTTTACTCTACTTAGTCTCACTGTCGGAGACATCTTTGCGAGCCTCCTAGCATTCATGCCAACTGGTTGGGCATT GATACAGATAGCTCAAGCGTGGAGGCCAGTGATAAAAGGCATTGGAATGTGGGGGTCTGTCAAGGCTTTATCAAGGGGGT ATGAATACGTTATGGGAGTGGTTATCTTTGCGCCAATAGCGATATTAGCTTGGTTTCCATTTGTTTCAGAATTCCAAACT AGACTGCTATACAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGTCTGGTGGCAAGAAGAATAAATAA
Protein sequence (LotjaGi4g1v0409500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKILDGYKAITVPSEEDKKSQRSLYASLEAMADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEE REGGNVQKVYYSVLIKAVDNIDQEIFRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEF NKDHGMRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGVSKASRGIN LSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFY VSSMLVVLTVYAFLYGKLYLSLSGFEAAIVKFARRKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTAVVDVII MQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYSRSHFVKGIELTILLICYKIYGSATPD STAYTLLSCSMWFLVCSWLFSPFLFNPSGFEWQKIVEDFDDWTKWITSRGGIGVPSNKSWESWWDEEQEHLQYTGILGQI WEVVLALRFFVYQYGIVYHLHVARGDQSIMVYALSWIVILAVMVILKVVSMGRKTFSADFQLMFRLLKVLLFIGTIVILV LLFTLLSLTVGDIFASLLAFMPTGWALIQIAQAWRPVIKGIGMWGSVKALSRGYEYVMGVVIFAPIAILAWFPFVSEFQT RLLYNQAFSRGLQIQRILSGGKKNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 311 | 311 | - | – | |
| PANTHER | 2 | 744 | 743 | 0.0 | – | |
| PANTHER | 2 | 744 | 743 | 0.0 | – | |
| Pfam | 19 | 563 | 545 | 9.3E-198 | ||
| Phobius | 312 | 334 | 23 | - | – | |
| TMHMM | 313 | 335 | 23 | - | – | |
| Phobius | 335 | 362 | 28 | - | – | |
| TMHMM | 361 | 383 | 23 | - | – | |
| Phobius | 363 | 382 | 20 | - | – | |
| Phobius | 383 | 393 | 11 | - | – | |
| TMHMM | 393 | 415 | 23 | - | – | |
| Phobius | 394 | 415 | 22 | - | – | |
| Phobius | 416 | 482 | 67 | - | – | |
| TMHMM | 483 | 505 | 23 | - | – | |
| Phobius | 483 | 505 | 23 | - | – | |
| Phobius | 506 | 559 | 54 | - | – | |
| TMHMM | 560 | 582 | 23 | - | – | |
| Phobius | 560 | 577 | 18 | - | – | |
| Phobius | 578 | 588 | 11 | - | – | |
| Phobius | 589 | 609 | 21 | - | – | |
| TMHMM | 589 | 611 | 23 | - | – | |
| Phobius | 610 | 628 | 19 | - | – | |
| TMHMM | 626 | 648 | 23 | - | – | |
| Phobius | 629 | 647 | 19 | - | – | |
| Phobius | 648 | 652 | 5 | - | – | |
| TMHMM | 653 | 673 | 21 | - | – | |
| Phobius | 653 | 674 | 22 | - | – | |
| Phobius | 675 | 693 | 19 | - | – | |
| TMHMM | 693 | 715 | 23 | - | – | |
| Phobius | 694 | 714 | 21 | - | – | |
| Phobius | 715 | 745 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | 1,3-beta-D-glucan synthase complex | A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain. | ||
| Molecular function | 1,3-beta-D-glucan synthase activity | Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1). | ||
| Biological process | (1->3)-beta-D-glucan biosynthetic process | The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0409500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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