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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0409900 |
| Transcript ID | LotjaGi4g1v0409900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|G7LE34|G7LE34_MEDTR Cation/H+ exchanger 3; Found in the gene: LotjaGi4g1v0409900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78596827..78601276) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCACTTGAGTGGGCAACCACTAAAACAAAACAAACATCACTTCTTTTCTCTTCCCTTTCCTTTCTGATTTTCGTTCC CCCACAAAAAAACAAAACAAAAAGTTTCATCTTTTTCTTCTATCTTCTCCATTTCTCACTTTGAATTAATTTACCTGTCA CCCAAAATCACACATTACACCATTCAGATTTTGCATGCAAAGCTCATTGAAGATGCTGCATGCATACCCTATAGGCTATA GTCCTTGGTAAAACTCAGGTCATGCATAGTTGAAAAAACATATAATTGAAGAAGCCTATACACAAGAGGAAGTGTAACTT GTGTCAATAGTGGTGATTGAGGAAAGAAAAAATGTCATCGGACAAAAACGCAACGGATGACATAGTGTGCTATTCCCCAA ATATGATAACAACAAATGGGATATGGCAAGGAGAAAACCCTTTGCACTATTCTCTCCCTCTTTTCATCTTGCAAGTCATT TTAGTTGTCATTGTCACCCGCATATTCGTCTTCATACTTAGGCCCATCCACCAGCCTCGCGTCATTGCTGAAATCATGGT TAGTTTTCTCTGCAAACCCCATAGTTTTCATCTCATGCATATGACATTGTGATCAAAAGACTAATAACTGATCATTAAAC TTGTAGCATATTTGAATCAACTTTTATTATCTCAAAATCAAATTAGAAACTACTTACATATACTTCACTGACTTTTGAAT TAATTGTAGAAGGAATTTTCAAATATATTATAATGTTATATGTTGACACCCCTCCCCTGCGCCCGGAGTGGAAAAGTGTG TGTTTCGATCAAGGTTGTGTGAGAATTGACTTTGAGAATTGACTTTGGTAAGTTTGATTATGATAAAAGTGAGAAGGAAA TATAATGATTTATGTTGAGATACGTCTATGAGAAAAGTGGTTTTTATGAGATAATGTTGAGAAATCCAATTATGAAATCT CATAATTGATTATGTCCACGGTAGAATGTAATCTCTCTAGTTCTTGCACAATATAACCACCTAAAAGTGATTATGGTCAG TTAGAGTTGATTCTAAGACTCCCAAATGTGTAACCGAACACATGGAGAAAGAAAAAAAAAAAGAAGGAGAAATGTGAGAT ATGATGAGGGATGTGTTGGAAAAAGAAGAGAGATATGAAGTAAAAAGAAGTGAAATTGGGATAGATGAGAAAGTGGGTGT GAAACTCTAAATGTATCAATGTTGAATTTGAAATTTATCATACAAATCATAGCTGACATTATTTTGTCATGCATGTGCAC AGGGAGGAATAATATTGGGTCCTTCAGTGCTTGGAAGAAGCAAGAAGTTTGCTGATGCAGTGTTCCCTCTAAGAAGTGTG ATGGTGATTGAAACAATGGCAAACGTTGGTCTTCTATATTTCCTCTTCTTGGTGGGTGTGGAGATGGACATATCTGCAAT ACGGCGCACTGGTAAAAAGGCGGTGACCGTAGCACTTGCCGGCATGGTTGCGCCTTTCGCCCTGGGAGCCATCTTCTCCA TCATCTGGATCAGAATTTCTAAGGCAGAAACCAATGAAGTAGCTTTCATGCTGTTTCTTGGGGTCACTCTCTCTGTCACA GCATTTCCTGTGCTTGCAAGGATCCTTGCTGAGCTCAAACTCATCAACACTGAGATGGGGAAGGTTGCTCTCTCAGCTGC ACTAGTCAATGATGTGTTTTCTTGGGTACTTTTGGCTCTTGCTGTCACCATTGCTGAGAATAAAAAACCAACCTTGACTT CATGCATGGTTGTGTTGTCATGTTCAGCTTTTGTGGTGTTTAATGTTTTTGCTGTGAGACCTGTAATAATGTGGATAATA AGGAAAACCCCAGAAGGCGAAACTTTCAGTGATTTCTACATTTGTTTGATTCTAGCTGGTGTTATGATCTCAGGTTTCAT CACTGATGCTATAGGGACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGACAATCCCAAATGGGTCACTTGGTCTTG CTCTTGTGGAAAAGCTGGAGGATTTTGTGTCTGGACTTTTGCTCCCTCTCTTTTTTGCCATTAGTGGGTTGAAGACTAAT GTAGGACTCATTAAAGGGTTCCTCACCTGGGGAATCATGTTCCTTCTGGTTGTTCTAGCTTGCATTGGCAAAATTGCTGG AACTTTGATTGTTGCAGTCTCTTATCAAATGTCATTTAGTGAAGGAGTTGCACTTGGCTTGCTAATGAACACAAAAGGCC TTGTTGAAATTATCTTGCTTAATATTGGTAGGGATCAGAAGGTACTACTATTACTAGTAGTAGAAAAGAATATATGCTAT ATACTATATTATGGAAGATCTTTTGTGCTCAAATGTTGTCTTAAATTTTTTTCCCACCAATGAAATCTTGACGTGTCATT TAAAAAATACGTAAGTCGGGAAGTAACATTTACATGATGACTTTTAATTGACATGTCAACATTTTATTGATAAAATAGGG AATGAGACATAATTTAGGAACTTCGGATTCCCTACTGTCAGGAAATCCTGAATTCAGTGAAGTCACGTAACTAAAGCCTT CCCATCAAGATCATACAGTTCAAATATAAAGAGAGTATTTTAAGGGTATAGTAACCTCTTTTAAGTCTGAGCCATTTGAT CAAAGATCAGCGGAGGCCGACTGAGTGCACTGAATGCAGGATTCCCTGACTGCAGGAATACGGGTCCAATTCAGGGACAT GAGATTTCAATCCAATATAGTAGTGCTACTACATCTATTAACTCCTTTCATTGATTCATTCCCTTATAAACCCTTGCAGG TTTTGGATGATGGAGCATTTGCAACCATGGTAATTATAACTATACTAATGACTGGAATAATTGTACCTGGTATTTCTGCT ATATACAAACCATCAAGGGGGTTCATATCTTATAAAAGAAGAACCATTCAGATGTCAAAAAGAGATTGTGAGTTCAGAGT CCTAGTTTGCATCCACACCCCTAGAAATGTTCCAACAATGATCAACCTTCTTGAAGCCACAAACCCAACAAAGAAGTCCC CTATATGTGTCTATGTCCTCCATTTGGTAGAACTCTCTGGCCGTACATCAGCATTGCTCATTGTCCACAGCTCAGGGAAG CCAGATCACCCTGCCCTTAACAGAACTCAAGCTCAATCTGACCACATAATCAACGCCTTTGAAAACTACGAGCAGCACGC TGATCACATCACTGTCCAGCCCTTAACAGCAGTCTCCCCTTACTCCACTATGCATGAGGATATATGCAACTTGGCGCAGG AAAAGCGTGTCGCCTTCATAATCATCCCTTTTCACAAGCAACAAACGGTAGATGGTGCCATGGAAGCTACCAACATGGTG TTTCGCAGTGTTAACCAAAATGTACTAGCAAATGCACCTTGCTCAGTTGGGATACTAGTAGATAGAGGCTTGAATAGCTC GAACCGTTTGGCGGCAGATCAAGTGTCTCATCAGGTTGCTGTATTGTTCTTTGGAGGGCCAGATGATAGAGAGGCATTGA GCTATGGATGGAGGATGTCTGAACATCCCGGGATAAGCCTTACCGTGATGCGATTCATCCCGGGGGAAGATGTAGTGGAG CCAAAGAGTCATCCTAGCCTCTACCCGGATGAGCCGAGGATACTAACAGTGGAAACAGATAAGGACACAGAGAAGCAACT TGATGACAAGTTAATAAATTGGTTTATGGTGAGTAATGCAAATGATGATTCAATTGATTACATGGAGAAGATGGTGAACA ATGGGGAGGAGACAGTGGCAGCAATAAGGTCAATGTATGATATTCATGGACTCTTCATAGTTGGGAGAGGACAAGGGATG ATATCACCTCTCACAGCAGGACTCACTGATTGGAGTGAGTGTCCAGAGTTAGGAGCAATTGGGGATTTGTTAGCATCTTC AGATTTTGCAGCAACTGCTTCAGTGTTGGTAGTGCAGCAATACATTGGGGCAGGGTTAGAAGCAGATGGGTCAGTAACAC CAGACAATACTATGATGACAAATGAAGAATATGTCAACCAGGTTCACCAACATTCAACACCACCAAGGGGGCATTCTGTG TTCAATACAGATCGCTTGTGAGTAAGCTATGTTGCTGCCAAATCAAGTCCTACAAAACTAAATAAAACTCAAAACATAAA AGGCCACAACAAATATATTTGCATATTTGGAAATCTTCTACAATTGACTCTGAAAGCATAATCAATTTTAGGGATAAGCT TTTGTGAGTAGTTTCTGTATTTCAGAATTGATTCTGATGAATGACAAACTGATCCAAACATACTATGAGTTTTTGTTTTG TTTTCGAGGTAATTGTAACGTCTTTTATTAGGTCTTCTGGCTAGTCTTTTTTTTCCTTGTGTCTTCAACTCTTTTACAAA TGTACATACTGATATACAATTTCATACATTTAATAGAAGTACATTTCCCC
CDS sequence (LotjaGi4g1v0409900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCGGACAAAAACGCAACGGATGACATAGTGTGCTATTCCCCAAATATGATAACAACAAATGGGATATGGCAAGG AGAAAACCCTTTGCACTATTCTCTCCCTCTTTTCATCTTGCAAGTCATTTTAGTTGTCATTGTCACCCGCATATTCGTCT TCATACTTAGGCCCATCCACCAGCCTCGCGTCATTGCTGAAATCATGGGAGGAATAATATTGGGTCCTTCAGTGCTTGGA AGAAGCAAGAAGTTTGCTGATGCAGTGTTCCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAACGTTGGTCTTCT ATATTTCCTCTTCTTGGTGGGTGTGGAGATGGACATATCTGCAATACGGCGCACTGGTAAAAAGGCGGTGACCGTAGCAC TTGCCGGCATGGTTGCGCCTTTCGCCCTGGGAGCCATCTTCTCCATCATCTGGATCAGAATTTCTAAGGCAGAAACCAAT GAAGTAGCTTTCATGCTGTTTCTTGGGGTCACTCTCTCTGTCACAGCATTTCCTGTGCTTGCAAGGATCCTTGCTGAGCT CAAACTCATCAACACTGAGATGGGGAAGGTTGCTCTCTCAGCTGCACTAGTCAATGATGTGTTTTCTTGGGTACTTTTGG CTCTTGCTGTCACCATTGCTGAGAATAAAAAACCAACCTTGACTTCATGCATGGTTGTGTTGTCATGTTCAGCTTTTGTG GTGTTTAATGTTTTTGCTGTGAGACCTGTAATAATGTGGATAATAAGGAAAACCCCAGAAGGCGAAACTTTCAGTGATTT CTACATTTGTTTGATTCTAGCTGGTGTTATGATCTCAGGTTTCATCACTGATGCTATAGGGACTCATTCTGTTTTTGGAG CTTTTGTGTTTGGTTTGACAATCCCAAATGGGTCACTTGGTCTTGCTCTTGTGGAAAAGCTGGAGGATTTTGTGTCTGGA CTTTTGCTCCCTCTCTTTTTTGCCATTAGTGGGTTGAAGACTAATGTAGGACTCATTAAAGGGTTCCTCACCTGGGGAAT CATGTTCCTTCTGGTTGTTCTAGCTTGCATTGGCAAAATTGCTGGAACTTTGATTGTTGCAGTCTCTTATCAAATGTCAT TTAGTGAAGGAGTTGCACTTGGCTTGCTAATGAACACAAAAGGCCTTGTTGAAATTATCTTGCTTAATATTGGTAGGGAT CAGAAGGTTTTGGATGATGGAGCATTTGCAACCATGGTAATTATAACTATACTAATGACTGGAATAATTGTACCTGGTAT TTCTGCTATATACAAACCATCAAGGGGGTTCATATCTTATAAAAGAAGAACCATTCAGATGTCAAAAAGAGATTGTGAGT TCAGAGTCCTAGTTTGCATCCACACCCCTAGAAATGTTCCAACAATGATCAACCTTCTTGAAGCCACAAACCCAACAAAG AAGTCCCCTATATGTGTCTATGTCCTCCATTTGGTAGAACTCTCTGGCCGTACATCAGCATTGCTCATTGTCCACAGCTC AGGGAAGCCAGATCACCCTGCCCTTAACAGAACTCAAGCTCAATCTGACCACATAATCAACGCCTTTGAAAACTACGAGC AGCACGCTGATCACATCACTGTCCAGCCCTTAACAGCAGTCTCCCCTTACTCCACTATGCATGAGGATATATGCAACTTG GCGCAGGAAAAGCGTGTCGCCTTCATAATCATCCCTTTTCACAAGCAACAAACGGTAGATGGTGCCATGGAAGCTACCAA CATGGTGTTTCGCAGTGTTAACCAAAATGTACTAGCAAATGCACCTTGCTCAGTTGGGATACTAGTAGATAGAGGCTTGA ATAGCTCGAACCGTTTGGCGGCAGATCAAGTGTCTCATCAGGTTGCTGTATTGTTCTTTGGAGGGCCAGATGATAGAGAG GCATTGAGCTATGGATGGAGGATGTCTGAACATCCCGGGATAAGCCTTACCGTGATGCGATTCATCCCGGGGGAAGATGT AGTGGAGCCAAAGAGTCATCCTAGCCTCTACCCGGATGAGCCGAGGATACTAACAGTGGAAACAGATAAGGACACAGAGA AGCAACTTGATGACAAGTTAATAAATTGGTTTATGGTGAGTAATGCAAATGATGATTCAATTGATTACATGGAGAAGATG GTGAACAATGGGGAGGAGACAGTGGCAGCAATAAGGTCAATGTATGATATTCATGGACTCTTCATAGTTGGGAGAGGACA AGGGATGATATCACCTCTCACAGCAGGACTCACTGATTGGAGTGAGTGTCCAGAGTTAGGAGCAATTGGGGATTTGTTAG CATCTTCAGATTTTGCAGCAACTGCTTCAGTGTTGGTAGTGCAGCAATACATTGGGGCAGGGTTAGAAGCAGATGGGTCA GTAACACCAGACAATACTATGATGACAAATGAAGAATATGTCAACCAGGTTCACCAACATTCAACACCACCAAGGGGGCA TTCTGTGTTCAATACAGATCGCTTGTGA
Protein sequence (LotjaGi4g1v0409900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSDKNATDDIVCYSPNMITTNGIWQGENPLHYSLPLFILQVILVVIVTRIFVFILRPIHQPRVIAEIMGGIILGPSVLG RSKKFADAVFPLRSVMVIETMANVGLLYFLFLVGVEMDISAIRRTGKKAVTVALAGMVAPFALGAIFSIIWIRISKAETN EVAFMLFLGVTLSVTAFPVLARILAELKLINTEMGKVALSAALVNDVFSWVLLALAVTIAENKKPTLTSCMVVLSCSAFV VFNVFAVRPVIMWIIRKTPEGETFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLTIPNGSLGLALVEKLEDFVSG LLLPLFFAISGLKTNVGLIKGFLTWGIMFLLVVLACIGKIAGTLIVAVSYQMSFSEGVALGLLMNTKGLVEIILLNIGRD QKVLDDGAFATMVIITILMTGIIVPGISAIYKPSRGFISYKRRTIQMSKRDCEFRVLVCIHTPRNVPTMINLLEATNPTK KSPICVYVLHLVELSGRTSALLIVHSSGKPDHPALNRTQAQSDHIINAFENYEQHADHITVQPLTAVSPYSTMHEDICNL AQEKRVAFIIIPFHKQQTVDGAMEATNMVFRSVNQNVLANAPCSVGILVDRGLNSSNRLAADQVSHQVAVLFFGGPDDRE ALSYGWRMSEHPGISLTVMRFIPGEDVVEPKSHPSLYPDEPRILTVETDKDTEKQLDDKLINWFMVSNANDDSIDYMEKM VNNGEETVAAIRSMYDIHGLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATASVLVVQQYIGAGLEADGS VTPDNTMMTNEEYVNQVHQHSTPPRGHSVFNTDRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | - | – | |
| PANTHER | 5 | 810 | 806 | 0.0 | – | |
| PANTHER | 5 | 810 | 806 | 0.0 | – | |
| Phobius | 35 | 56 | 22 | - | – | |
| Gene3D | 37 | 434 | 398 | 1.5E-93 | ||
| TMHMM | 37 | 56 | 20 | - | – | |
| Pfam | 44 | 425 | 382 | 1.5E-57 | ||
| Phobius | 57 | 62 | 6 | - | – | |
| TMHMM | 63 | 80 | 18 | - | – | |
| Phobius | 63 | 80 | 18 | - | – | |
| Phobius | 81 | 99 | 19 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 100 | 117 | 18 | - | – | |
| Phobius | 118 | 128 | 11 | - | – | |
| Phobius | 129 | 152 | 24 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 153 | 163 | 11 | - | – | |
| TMHMM | 162 | 184 | 23 | - | – | |
| Phobius | 164 | 185 | 22 | - | – | |
| Phobius | 186 | 196 | 11 | - | – | |
| Phobius | 197 | 220 | 24 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 221 | 231 | 11 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 232 | 255 | 24 | - | – | |
| Phobius | 256 | 266 | 11 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 267 | 286 | 20 | - | – | |
| Phobius | 287 | 291 | 5 | - | – | |
| Phobius | 292 | 311 | 20 | - | – | |
| Phobius | 312 | 317 | 6 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 318 | 339 | 22 | - | – | |
| Phobius | 340 | 344 | 5 | - | – | |
| Phobius | 345 | 370 | 26 | - | – | |
| TMHMM | 346 | 368 | 23 | - | – | |
| Phobius | 371 | 376 | 6 | - | – | |
| Phobius | 377 | 397 | 21 | - | – | |
| TMHMM | 378 | 397 | 20 | - | – | |
| Phobius | 398 | 408 | 11 | - | – | |
| Phobius | 409 | 431 | 23 | - | – | |
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 432 | 835 | 404 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0409900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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