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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0410600 |
Transcript ID | LotjaGi4g1v0410600.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Adenine nucleotide alpha hydrolases-domain containing protein kinase; TAIR: AT5G20310.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35; TrEMBL-Plants: tr|I3TAD3|I3TAD3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0410600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78656790..78660754) extracted from Lotus japonicus Gifu genome v1.2.
CAACAACCAATTCTTCTAGAGTCAATTTTTCTTAAACCTGTATCATTGAGGTTACATGCCACATTATTGTGACACATAAT TTAACAAAAAAACTACCATTATTATGATTGCATAATCCAAAAAAGTGTTAACAATGTTTGGCGCCATCATCTGTGGGGAA AAGGGTTAACAATGTGGAATACAAGGGATAATGGAGAAACAAGGCAAGTGCATGGAGAGGGGGTGGTGGCTGTAGCAGTG GACAAGGAAAAATCCAGCCAGTATGCTTTCAAATGGGCAATTGATAACCTTTTCCCCAGAAGCCGGCCCCTAAAACTAAT CCATGTTGTTCATAGATCACAATCTAACCCAGGTTTGTTCCCACCTATATTACCATCATCATTCACAAATAATTATGGTT TTAAATAGCAATCCAACAATTTTTATTGTACACATGATACTAAGCTTTCTTCAATCATCGCAATTGTATTAGATTATGTT TAGAACCGCGTCTCAATTGCTTTCAACGTGCGTGATTTCAAGAGTTACAAGTTTTGAGAAAAACATGCACAAACACAAAT ACAAACTGATTATTAATCAACCACATTTATCTGTAATTTTTCATAATTTCAAATTTCTCCATATGACCATAATTGAAACA ACAAGTCAGCAACCACAATTTAAAACTACACAAATAATATTTTATTTTATTTAATGGGATCAAATATTAGTATTTATACT TTTGAGGGAGCCAAAAGTATTGTATTTCATGTTATTTGTCAAAGCAAGAATAGATTCAAAGTCCATGTTATTTGTCAGAC CAACAATAACCCAGGTTTGTTGACACCTTACTTGGCCATTCTCTAAATTTATATTTCATTAAAAAATGAATTGTTGATGC CCAAATGAAGGAATGACCAACCTGTAATTGCTGCAATTGGGAGTGGTACTCCTATACTGTTGTCAGTTTAGAAATTAACA ACATAGATAACACTCTTGTACCACCAAACACATATATTAACTCGTGTGAGCTTATTGTAGCTTAAGCAAATGTTTTAAGT TCGAGGCTTTGTGAATAGATCTGTGTTAAGTGCAATGAAGAGTTTTGTCGCTCATAGTGGTATGCCATGCTCATAGCTAA CTGAAAAATTAACAGAACAAAAGTGAGCTTAGCCTAATAAAATGTGCATAAACTAGCTGATTATATCCATCAATAACATT TGGGCTTTAAGTCCATTTTATAAGTTTTCATTTGCCCCATATTTTCTATCTTAAATTTCTATTTTTTCTTTAGAGGGCAT GATTCAATTTCTCTTTCAGGTGTGGCAGGAAACAGTGAAATTGTGACCCAACAAGAACCAGATCATCAAGCTTTGCAAAT ATTACTTCCATATAGGTGCTTTTGCACCCGTAGAAAGGTATGTTGCTTATAGCATGTTTGGATCAACTTATTTTTCTCAA AATCAATTCTGGCATTCAGAAGTTACTCACAGAAACTATTTCCTAGAATTGATTTCGGCTTCAGAATCAATTATAGAAGA ATTTCCGAACGTGCACTTAATTAACACTAGTCTCTACGCAGCACTTTGCAAGTTGTTTGTTTGTTTTTTTCATTTCTTAT TTGGTGGAAGTGATGTTCTTCTGTTTGCATATGAAAATAAAGGGAAAAATGACATAATATTTATCAATTGATCTTTTCAG TTTTTATTGAAGTAGTTTCTATTATTCAGGTGCAATTTGAGACTGTGATTCTTTACAGTTCAGATGTGGCAAGAGCACTC CTTGATTATGTCTCCTTAGGTGGAGTTGATACATTGATACTTGGCACATTATCAAGGAATGGCCTTTCCAGGTAGCTTTC AAGGTTCTCAAGAATCTAAGCACATGAATGATTTGATACAAATTTGCATTAGTATTATATCTGAAACACCAGCTTTTTCT TGAATCAGTTTAAGGATATTCAAGAATTCAGATGTTTCAAGCAGTGTACTAAAGTCAGCACCAAATTTCTGTAATGTTTA CATTATATACAAGGGGAAAGTCAGTGCTATGCGTCCTGCTTCACGTTCTGCCCAAGCTATCCATGCAGTTGAAAGAAATC AAACTATCTATCACAATGCGACTCAATCAGATCCTGACATGTAAGTATTTTGTTTAAGGCCAGATACATACAAGTATCAT CACTCTGCTTGTTTGGAAATCGTTCTGGAGTTAATTATGTGAATAGCTCCTGAGTGCCAGAATTGATTCTGAGAAAAAAA AAGGCAGTCCAAACATGCTAACTGATTTATACATGTGTGGATGTATAAATGTTAATGATTAGCCTAAAGTACACAATACC AATTCGACGCGTTTTGGTAAACAACTTAATTAAGCGCTTAAAGCAATCAGTGCTTATCGCATAAGTTTGTAAGCTAATCT AAGCAGTTTAAGAAAATAAGTAGCTTATAGGTAGGTCATAAGCTATTTACATAAGCTCTCAGATACTTCCATAATCGCTT ATGTTGAAAGATAATCTCAAATAAGCTCTTCCAAACTAGAGTTGTGACTAAAATTCTTTGTACTCTTAAGGTCATAGAAA CCTACTAGGGAATTTTCCTTTGGCAAAGATAGTAACTAAAGGCTCAATCAACAAAAAAAACTCTGGATAATAGTAAGATA ATTTCAGCACAAGTTTTGATCAACTAGGATACCAATTTTGAAATAAGCAATAATGGTTTGATGGAAAATGATACATAATC TTGAGTCTCAACTCTGTAGTAGGATTCCCTGAAGTGGGAAAATCAAATCAAATGATAGAATGCAAATTGGATCAACTTAT TTTTCTTCAAAATCATTTTTGTCACTAAAACGCTACTCACAGAAGCTTCTCCCCTAGAATTGATTTTGACTACAGAGTCA ATTGTAGAAGGATTTACAAATGTGCTATAATTTGCTTTAATGAATGTATTTTATCTTATTACAGGTTATATGATGAGGTC TCAGTTGTGGAGAATGATAACCCACATGCAAGGCTAAGCACAGACAGTGATTATCTCTCATTTTATGAAAATTTGGAATC TGGAGGACTGGTTGGATCTTCATCATCATCAGAAATTTTAAATGGAAACTTTGAGCCCTTATTCTCATCTTCCAAAACTG CCAGTGTGGACACTATGAATGATTTTTCATGCGGTGAAGGACCATTGTTCTCCTTAGTAAGTCAATTTATTGATACGAGT TATTATTGGTAATTAAGACAATGAAAGTAAGGTACAGTTATCTTTAAAAATAATTTTCTCATACATCCTACCATGTATTA ATATTACTATTGTTATGTATTCCTACTTTTCACACACACCTTAATAACCATTTCTTCCTAGTAACATAGCATTGATGTTA AAGAAATGCATCATCTCAATCTTGCAGGATAGTATGGAAGATGAAGTCTTAAGACATAAGCTAGAGCATAAGCATGCAAT GGAATTGTACCATGCAGCCTGCAGAGAAGTAAAAAGCTCAAATCAGAAGGTTCTGAGTAGATCCCTCAATTTTTCAATTT TTCGCCTCTTAAAATGTTTTCACTTGCATTAAGTCATGAAAGTTTAAGCATGAGTATGCTGACTCTACTATTTATTTTTT TTGTCCAGGTGATTGAACTTCAGGATTGGAACTTGAAACAGGAGCAGAGACTGAAAGAGGCTGAATCAGAAAATGCAAGA TGTAAGACAGACATTGAAGTAGCAAAAAGGTTGGTAGTGCAAGAGATGGAGAACAAAGTGCTAAGAGCTGAAATGAAAGC AATGATAGAGGCAGATGAGAGGAAGAAAGTTTTAGATGCTTTAAGACAGTCTCAGAATTTCATCAAGTATCAAACCTTGT TCCACTCCTTGATTGTTCTGTTTTTATTATATATGTACTTCTCATCCGCTTAATCAAAACAATTTGAGTGAAAATATATT ATCTATAATTTTTTTTGAGACATATAAGTACGTTAAGACTTGCAA
CDS sequence (LotjaGi4g1v0410600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAATACAAGGGATAATGGAGAAACAAGGCAAGTGCATGGAGAGGGGGTGGTGGCTGTAGCAGTGGACAAGGAAAA ATCCAGCCAGTATGCTTTCAAATGGGCAATTGATAACCTTTTCCCCAGAAGCCGGCCCCTAAAACTAATCCATGTTGTTC ATAGATCACAATCTAACCCAGGTGTGGCAGGAAACAGTGAAATTGTGACCCAACAAGAACCAGATCATCAAGCTTTGCAA ATATTACTTCCATATAGGTGCTTTTGCACCCGTAGAAAGGTGCAATTTGAGACTGTGATTCTTTACAGTTCAGATGTGGC AAGAGCACTCCTTGATTATGTCTCCTTAGGTGGAGTTGATACATTGATACTTGGCACATTATCAAGGAATGGCCTTTCCA GTTTAAGGATATTCAAGAATTCAGATGTTTCAAGCAGTGTACTAAAGTCAGCACCAAATTTCTGTAATGTTTACATTATA TACAAGGGGAAAGTCAGTGCTATGCGTCCTGCTTCACGTTCTGCCCAAGCTATCCATGCAGTTGAAAGAAATCAAACTAT CTATCACAATGCGACTCAATCAGATCCTGACATGTTATATGATGAGGTCTCAGTTGTGGAGAATGATAACCCACATGCAA GGCTAAGCACAGACAGTGATTATCTCTCATTTTATGAAAATTTGGAATCTGGAGGACTGGTTGGATCTTCATCATCATCA GAAATTTTAAATGGAAACTTTGAGCCCTTATTCTCATCTTCCAAAACTGCCAGTGTGGACACTATGAATGATTTTTCATG CGGTGAAGGACCATTGTTCTCCTTAGATAGTATGGAAGATGAAGTCTTAAGACATAAGCTAGAGCATAAGCATGCAATGG AATTGTACCATGCAGCCTGCAGAGAAGTAAAAAGCTCAAATCAGAAGGTGATTGAACTTCAGGATTGGAACTTGAAACAG GAGCAGAGACTGAAAGAGGCTGAATCAGAAAATGCAAGATGTAAGACAGACATTGAAGTAGCAAAAAGGTTGGTAGTGCA AGAGATGGAGAACAAAGTGCTAAGAGCTGAAATGAAAGCAATGATAGAGGCAGATGAGAGGAAGAAAGTTTTAGATGCTT TAAGACAGTCTCAGAATTTCATCAAGTATCAAACCTTGTTCCACTCCTTGATTGTTCTGTTTTTATTATATATGTACTTC TCATCCGCTTAA
Protein sequence (LotjaGi4g1v0410600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNTRDNGETRQVHGEGVVAVAVDKEKSSQYAFKWAIDNLFPRSRPLKLIHVVHRSQSNPGVAGNSEIVTQQEPDHQALQ ILLPYRCFCTRRKVQFETVILYSSDVARALLDYVSLGGVDTLILGTLSRNGLSSLRIFKNSDVSSSVLKSAPNFCNVYII YKGKVSAMRPASRSAQAIHAVERNQTIYHNATQSDPDMLYDEVSVVENDNPHARLSTDSDYLSFYENLESGGLVGSSSSS EILNGNFEPLFSSSKTASVDTMNDFSCGEGPLFSLDSMEDEVLRHKLEHKHAMELYHAACREVKSSNQKVIELQDWNLKQ EQRLKEAESENARCKTDIEVAKRLVVQEMENKVLRAEMKAMIEADERKKVLDALRQSQNFIKYQTLFHSLIVLFLLYMYF SSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 379 | 379 | - | – | |
PANTHER | 12 | 401 | 390 | 1.1E-109 | – | |
PANTHER | 12 | 401 | 390 | 1.1E-109 | – | |
CDD | 18 | 163 | 146 | 1.99216E-51 | – | |
Gene3D | 18 | 160 | 143 | 3.0E-13 | ||
SUPERFAMILY | 19 | 160 | 142 | 1.59E-12 | – | |
Pfam | 19 | 152 | 134 | 4.7E-12 | ||
Coils | 317 | 344 | 28 | - | – | |
Phobius | 380 | 400 | 21 | - | – | |
Phobius | 401 | 403 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0410600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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