Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0412500 |
Transcript ID | LotjaGi4g1v0412500.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Eukaryotic aspartyl protease family protein; TAIR: AT4G33490.2 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1; TrEMBL-Plants: tr|A0A151R6Y5|A0A151R6Y5_CAJCA Aspartic proteinase Asp1; Found in the gene: LotjaGi4g1v0412500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78832976..78840032) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTCATGAAGTCGTGGAAGGAGACAGGGAGAAGTTTCCAAGAAACTGGCAATCACACTGAAACCCGAACACTTGCTCA TTGCTCATTGCTTCCTTTTTTCTTCTGCATCAACAGTTAAGGGAGACACAGTTCTGTTCTGTGTAGCATTTGATGGATGT TTCCTTGTGAAGAAGAAAGGAATAACAAAAAACCAGACCATGAGAAGCAATCCCACTTCTAATGCCTGAGGTTGTCCTGT CCTTTCTTCCTTCCTAAACCCAAACTCAATCCAAGGTTGTCATTCACACCAAGTTATGAAGCAAAAGCAATACCTATGAT ACCTTCATGAACAAGGACAACCAACAACTCTTTCAAGAAGAAACCAACATTTTAACTTTAAACTTAACCAATCAATCTTC AGTTTCTTTTCATTCCTAGTTTGCTAATAAAAAAAGAGCTATTTTGGATTAACAGGGAGAGAAGAAAATGAAGATAGGGA AGGTGGGATGGTTGATGGTGGTGCTTACAATGATGGTGTTCAGCTTGTCCTCTTGTTCAGCTTGGTTTGGTAACAAACAC AGACATAGAAGGAACTCTATTCTCCCAGATGAAACCACATCCTCAAAGCCAAGGCTCATGAACTCTGCTGGTTCCTCTGT TGTGTTCCAAGTTAATGGAAATGTTTATCCTGTTGGGTAAGTAAATTCAATTTCCTTTTCTGGGTTGCTTGTTCCTTTTC ATGTTTTGGGGTTCACTTGATATCGAAATTCACTACTGGAATATTTCTTTTTTGTATTTTAATTACTAGGCACTTTCTGT TGCTTTAGAAATCTGTTAGTTTACTATTTATATAACAAAAGGAAAGGCATAAACATGTTTGGAAATACTTCTGCAATTGA TTCTTCTGCCGGAATCAATTTTAGGTAGAAGCTTTTGTGAGTAGCTTCTATGTCTATGTCTCAGAATTGATTATGATGAA AGAGAAAATTATCGAAACGTGCTATCACATAGTGTCTTGTGGATATTTGGTTTTACGATTTGCACAAAATTCAAAGAGTA AGTGATTCTAGAATATTTTACCGTGAAACCAAACATGCTATAAAACAGAAATGAAATAGAAAAACAGAAGAAACGCTTTC TAGCCTTAAAGTTACAAGAAACTAGCAATCCCACTGAAACCCGAGCACTTGCTCAATGCTCATTGCTCATTGCTCCCTTT TTCCCTTCTGCACCAACAATTGGGATTGGATGAAATAATTAATTAACATTGACAAATGGAAGAAACTTTATATTCTGATG TAAGTTTCACCTTTAATTTCAAAATTTTCAGGTTCTATAATGTTTCTCTCAACATTGGCCAGCCACCAAGGCCCTACTTT CTTGATATTGATACTGGTAGTGACCTCACTTGGCTCCAATGTGATGCTCCTTGTTCCCATTGCTCTGAGGTACTATTACG ATGACTATATGGAAAATCCCCACAGCAATTTTTTCTTTATAAATTCTTAAAGAGGCAAAGAATGTGCAGTACAAAATAAT AGATTAAAAACCTCATCTTGAATATAGATAGATAGATGGATACATACGTACATGTTTGGAAAGCATAATCAATTCTGAAG AGAAACTTATATGACTAGCTTATAGTGCTAATATTGATTATGAGAAAAAATAAACTGATCCAAAACATTTGTTGATTCTT TTACTTCAGACATACCATCCTCTCTACCGGCCTAGCAATGACTTTGTGCCTTGCAAGGATTCCCTCTGTGCATCCTTGCA GCCCTCTGATGACTACAACTGTGAAGACCCTAATCAATGTGACTATGAAATTGAGTATGCAGATCACTACTCAACCCTTG GTGTGCTTCTCAATGATGTCTACCTTCTCAACTTTACCAATGGAGTCCAACTTAAAGTTCGGATGGGACTTGGGTTCGTT TACTCTGCAAGCTTTGTTTTACCACCTCTCAGCCATTTTTACTTTCTTTGTGTGTGCATGTTCTATTAAAATACTGGTGT TTCTGCAAGCAAAACCATTCAGGAATGACTCAAATTGTTTTCATCTTTATTGTCTAACAAATTTTATGAAGTCCAGAAAT CATGAGAATTTGAATATATTCTCCTTGGATAGTACATGCCTATTTCAGAAAAAAAAAAAAAAACACCTCTATTGCATGAT CCAACATTTGGTATATACTATATACAGAACATATTTGATGATGTTAACCTAACATAGACTCATGAAGATTACAATTTATG CCATATTTTTGTTAAGAAATTCTTAAGAAGTTTCTTATGCACCTTTTTCTGATTCCTTTCAACAGATGTGGATATGATCA GGTTTTTTCACCATCTTCATACCACCCCTTAGATGGAATACTTGGGCTAGGTAGGGGAAAAGCCAGCTTGATATCACAAT TGAATAGTATGGGATTGGTGCGAAATGTAATTGGACATTGTTTAAGTTCTAAGGGAGGGGGATATATCTTCTTTGGAAAT GCTTATGATTCTTCTCGAATGATTTGGACTCCGATTTCATCTATAGATTCGTAAGTACACCTTCGTAAATCAGATCCTAA CTTAATGAGATAAGGCTTTTGTTACGTGTTACGTGTATTTTAATGACTCGTAATTCTATCTGCTGATGTAAAATCCTATG TGTGGTTTGTTTCAGCAAACATTACTCAGCAGGGCCAGCTGAACTTGTTTTGGGAGGAAGGAAGAGTGGGGTGGGAAGTC TTACTGCTGTTTTTGACACTGGGAGTTCTTACACTTACTTTAACTCTCAGGCTTACCAAGCATTACTTTCTTGGGTCAGT TAAAATCTCACCATATTTCCCTATTTGAAGTATTTCTATAAGTATGAGGCATTTCTGCTAAAGATCATGTAAATATCATG ATTCAAGATTCAAAATTGTATGAAAAAATTAAAGGGTGAAATATGTTTAGTCCTTGATGTTAAGCCATATTCTGTTATAT GCACCATCATTAATAGCATGGTTAGATCAAATCTTCTTTTTTTCAGATTCAATCCTGAAACTCAAATGCTAGAAAGTTGA TTTTGACTTTAGAATCAACTGTAGAAGGAGTTTCTAACATGCGCAAAATAGTTTTGATCTAATGTCTAGGAGACTAAAAC AAGATATTTGAAAATGAGAGACCAAAATCAAAATTTCAGACCTTTATAGAGACTGAAAACATACTCAACTTAAAAATAAA TGAAGTACTTTCTTCAGTAATACCAGAAAATATTGGCTGGTAACTTAAGTTGGTGTTTTGTTTAATTTTCAAATGCAGTT GAAGAAGGAATTAACTGGAAAACCCATAAAAGTAGCACCTGATGATCAGACTTTACCTGTCTGCTGGCACGGTAGAAGAC CTTTCAGAAGCATGAGTGAAATCAAGAAATACTTCAAGCCTCTAGCACTTAGTTTCACCAATGGTGGAAGAGTTAAAACT CAATTTGAGATCCCTCCTGAAGGTTATCTGATAATATCAGTGAGTTCTAACCTACAAGTGTCTCCTATCATATGTAACAT GCATTTCATGTGTCATGTGTGAATGCTAACTATTTGTTTTGCCATGCCAGAACTTTGGGAATGTTTGTCTAGGCATTCTA AATGGCCCTGAAGTAGGGTTGGGGGAACTGAACCTAATTGGAGGTGAGAACTTTGTTATGTTGTCACTTTTTATTTTCTT CTGCTTCTCTCCTTTTGGATAATGATTAATGAATATTGTGTGTGTTTGGAAACCCTTCTACAATTGGTTCTGAAGACTCT TCAGAATCAATTCTAGAGAGAAGCTTGTGTGTTTAACTTCTAGATTTCAGAATTGATTCTGATGAAAGAGAAACTGATCT TAACATGCTAACCATTACTAGCATTACAATTCTTCACTTTTCCAACAAAATGCTTCTTAAACTCTGCATTATACAAGTCC TGGTGTTGTTTATGCAGATATATCAATGCAAGACAAAGTGATGGTATTTGACAATGAGAAGCTGTCGATTGGGTGGGGAG CTGCGGATTGCGACCGTGTTCCAAGATCTAGAGATTTTAGTATTTGATCATAAAAAAATGCTTAATCCACACATGCATAG CGTTGCTATCATCAAGAGGATGGATAATGACCTGTGCTTTATAGAGCAGGGTGATAACACTACTTATGTATTGTCTTTAT AGAGTGTATGATGTCTACTTGCTTATGATTTGTGAATACTTATTCAACCTTGTGTATAACATATTGCTGTAGAGTATAGA GATCCAGATATATTATTTATTTCCTTCTGGTTAGAGAAGTAAATTGCCATAACACATTAGCTTCACTACATTGCTGTGTG CCTGTGACTGTGAGGCATTCATTTAGAACTTGAAGGGAAAAGACAATTTCAAAACACAGTAACTCTATATGCTACGCTTG GTAGCTTCTTACTATAAGTGATAACTAGACTCTCATTCACAGATCCAAATATGCTAAAAGCAAATTTATGCAAGATAGAG ACATGCATCAATTATTCTTTAATTAGGTGGCAGGTCTCATGCAGCTTCCTTTTGAACGATGTCAGGATCATTCAAGTTTG ACTGCTGAAGAAATAGATGTACTTATCATGTAAACTATATACTATTTTCCAACAGGTTTCTGTTTTTCTTATAATGTCAT TTTCCTTCATAGATATGTTAGTTTTAAGGTTCAAACTGTCAACCATGGGCATAGAATTCTGAGGCATATGCTGTTCCACA CCATTCCAAAAGCCTCCTTCCTCTCAACTTGGTATTTTTTAGACTTTTGAAAAGTCTAGTTTAAAGCAGACATAGCCTGA TCTGACCACTTAATTTCCTTATATCAACAAGTTTAGCCTTACCACTACTATATTTCTGCGAACATAACTTTTAAACTGAA TCATTCTGAAATATAACTAAAAAAAGATATATTATACATATTGTTTCATAACCATATAAAAAAATCCTAACACAATACCA TTGAAACAAGAATCTTCTACAATATCCTAAAATGACTATTTGGATCTTCAATTCTTCACCCCATTTGAGATCAAATTAAC TGCTTATTGTTCTAGTTTCAAAAGATCTCAATTTCCCTGAATCAATCAAATAACAGCCAACTTCAACAATCCCCACCATT GTGTGAGGCATCACTTCCATTAGTCCACTTGCAGTAACAGTAGTTAGGTTGGTGTGAATGGAAACTTGTGGGTCACTTTC ATAATTTCATCCTCTAAGTGTTCCAAAAAGAATATGAATCAAAATGTGAAGAGAGCTGGTTCATCTGGTACTGAACCTGA GGGGCAAAAGGGTCATCCACCACTGCTGACATGTTCATGTTCATGTTCATGTTGTGATTGTTGGTGTTATCCATTATTAA ATTCATATCAAAATCAAAGGAGGCTGCAACTGGGTCAAGCTCATTCCACTTGATCTCACTCTGCACCTCCTTGCTGCACG TGACCTCCGGCGACAGCACGTGCTCCTCCGTGCAGCTGGAATCCGTGTGCAACCTTGGAACCGAATCTGATGTATCCGTA TACAGCTGGTGCTCATTCCTGAAATCATCATGGCCATACATCTTAATCTCAGGCTTCATCTCATGATTCTCCTCAGAAAA ATGATCCATCACCCCAACCACACTCTCATATTTCTCAATCTTCCCTTTCTTGTTGTAAATTCGACACAACACCCAATCAT CAAGCTGCAATCATCAAAATCAATCAAACCATGTCAACCATTGAAAACAAAAAACATCAAATTTTGACCATTTTTTAAGA ACTTGGTGAGATTCAGAGACATACCCTTAAATTGTTGTTGTTTTTCTTGGTGGCAGATCGATCAACATTGGCAAGACGAT ACTCATGCATGATCCAATTAGTCTTCACACCTTTAGGTGCTTTCCCTGCATAGAAAACCAGCGCCTTCTTGATCCCCAGA GTCTTCGGTTTTCCGATCGGCTTATCCGCTCCGGTCGCCTTCCAGTACCCGGTTCCAGCAGCCCGGTTCGGCCGTGAACC GTTGGGGTACTTCCGGTCCCTGGGAGTGAAAAAGTACCATTCCTTCTCACCGTAAAGAGCCATATCTGTATACAAAGTAA CAATGGTAATGAGAAATTGCTCTGTTTTTACTCTGTTTTTACTCTGTTTTTGTTTATTGGTTGAAAATGAAAATGAATGA ATTTGTTTGAAGGGGAGGGAAAATTACCTGGAAGCTGCCATGGATCAAACTTGTAGAGGTCGAGTTCTTTGATAATGGGA ACATTGATGGGTTGAGAAGCACACTTGGCACACAAGTAGTGTTTGACAAGTTCATCGTCAGTGGGGTGGAATCTGAAACC AGGTGGTAATTCCAATGCACCTTGCATTCGTGTGGGTTTGAGTTTTCTTCTTCTTCTTCTTCTTCTTCCTTGTGATGACT CTGGTTTTTGGTGGCGGCTTGAAAGTTCGAACTTTTGAGAGAGGGAGCGCGTGGTGTTTTATAGGGTGAGAAAAAGTGTA ATTGACACGTGGGTTTGAGAACCCTCGAAGTTCGAGATGGACACGTGGCGGAACAGGAGTGGATGGTCGGGGACACGAGA AGGTGATTCTGTCACGGCTTGCGTCATGTTTTAAACCGGGTTTGGGGAAGTGAACTGTTATATGGTAGCGGCTCTGTCGT TATCGGTCGACGCAACAGGATTATGGTTCATGTTTGTAGTGCTCTGCAGCCTCCAACATTTCTTGCTCTGTCCAGTTCTA CCTTGCCACATGTGCCTCAGCTTGACCGTTCAATATAAAGCTACAATCATTTGATCGATTGACAATATATTTTTGGAAAA TCGGGCGGCTCGACCTACGTAGAAAGGGTTAGTGTCTTAGGCGGGTTCATCTCTTAGGACTTAAACGAGACCCTTACGAG TTGGACAAGCCTTATTGTGAAAGGTTAAACTTCAATTCAATGAGACGAGTTTCATTCATTCTTATTTGTATATTCTTTAC AGTTCTAAACCTTAGACATGAAAGTGTTAAGTCCATGCAAGAACAATTTTTAAATGGTATAAATGAAGAGATGTGATAGT AGAAAAAATAAGTTCAG
CDS sequence (LotjaGi4g1v0412500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATAGGGAAGGTGGGATGGTTGATGGTGGTGCTTACAATGATGGTGTTCAGCTTGTCCTCTTGTTCAGCTTGGTT TGGTAACAAACACAGACATAGAAGGAACTCTATTCTCCCAGATGAAACCACATCCTCAAAGCCAAGGCTCATGAACTCTG CTGGTTCCTCTGTTGTGTTCCAAGTTAATGGAAATGTTTATCCTGTTGGGTTCTATAATGTTTCTCTCAACATTGGCCAG CCACCAAGGCCCTACTTTCTTGATATTGATACTGGTAGTGACCTCACTTGGCTCCAATGTGATGCTCCTTGTTCCCATTG CTCTGAGACATACCATCCTCTCTACCGGCCTAGCAATGACTTTGTGCCTTGCAAGGATTCCCTCTGTGCATCCTTGCAGC CCTCTGATGACTACAACTGTGAAGACCCTAATCAATGTGACTATGAAATTGAGTATGCAGATCACTACTCAACCCTTGGT GTGCTTCTCAATGATGTCTACCTTCTCAACTTTACCAATGGAGTCCAACTTAAAGTTCGGATGGGACTTGGATGTGGATA TGATCAGGTTTTTTCACCATCTTCATACCACCCCTTAGATGGAATACTTGGGCTAGGTAGGGGAAAAGCCAGCTTGATAT CACAATTGAATAGTATGGGATTGGTGCGAAATGTAATTGGACATTGTTTAAGTTCTAAGGGAGGGGGATATATCTTCTTT GGAAATGCTTATGATTCTTCTCGAATGATTTGGACTCCGATTTCATCTATAGATTCCAAACATTACTCAGCAGGGCCAGC TGAACTTGTTTTGGGAGGAAGGAAGAGTGGGGTGGGAAGTCTTACTGCTGTTTTTGACACTGGGAGTTCTTACACTTACT TTAACTCTCAGGCTTACCAAGCATTACTTTCTTGGTTGAAGAAGGAATTAACTGGAAAACCCATAAAAGTAGCACCTGAT GATCAGACTTTACCTGTCTGCTGGCACGGTAGAAGACCTTTCAGAAGCATGAGTGAAATCAAGAAATACTTCAAGCCTCT AGCACTTAGTTTCACCAATGGTGGAAGAGTTAAAACTCAATTTGAGATCCCTCCTGAAGGTTATCTGATAATATCAAACT TTGGGAATGTTTGTCTAGGCATTCTAAATGGCCCTGAAGTAGGGTTGGGGGAACTGAACCTAATTGGAGATATATCAATG CAAGACAAAGTGATGGTATTTGACAATGAGAAGCTGTCGATTGGGTGGGGAGCTGCGGATTGCGACCGTGTTCCAAGATC TAGAGATTTTAGTATTTGA
Protein sequence (LotjaGi4g1v0412500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIGKVGWLMVVLTMMVFSLSSCSAWFGNKHRHRRNSILPDETTSSKPRLMNSAGSSVVFQVNGNVYPVGFYNVSLNIGQ PPRPYFLDIDTGSDLTWLQCDAPCSHCSETYHPLYRPSNDFVPCKDSLCASLQPSDDYNCEDPNQCDYEIEYADHYSTLG VLLNDVYLLNFTNGVQLKVRMGLGCGYDQVFSPSSYHPLDGILGLGRGKASLISQLNSMGLVRNVIGHCLSSKGGGYIFF GNAYDSSRMIWTPISSIDSKHYSAGPAELVLGGRKSGVGSLTAVFDTGSSYTYFNSQAYQALLSWLKKELTGKPIKVAPD DQTLPVCWHGRRPFRSMSEIKKYFKPLALSFTNGGRVKTQFEIPPEGYLIISNFGNVCLGILNGPEVGLGELNLIGDISM QDKVMVFDNEKLSIGWGAADCDRVPRSRDFSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
ProSiteProfiles | 1 | 23 | 23 | 6.0 | – | |
SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
SignalP_EUK | 1 | 25 | 25 | - | – | |
Phobius | 1 | 5 | 5 | - | – | |
Phobius | 6 | 27 | 22 | - | – | |
TMHMM | 7 | 29 | 23 | - | – | |
Phobius | 28 | 432 | 405 | - | – | |
PANTHER | 42 | 426 | 385 | 2.9E-175 | – | |
PANTHER | 42 | 426 | 385 | 2.9E-175 | ||
Gene3D | 52 | 240 | 189 | 2.8E-41 | ||
SUPERFAMILY | 64 | 424 | 361 | 2.82E-81 | ||
Pfam | 72 | 242 | 171 | 1.6E-46 | ||
ProSiteProfiles | 72 | 417 | 346 | 31.398 | ||
PRINTS | 78 | 98 | 21 | 3.2E-6 | ||
Gene3D | 241 | 424 | 184 | 1.4E-27 | ||
Pfam | 279 | 415 | 137 | 1.7E-15 | ||
PRINTS | 283 | 294 | 12 | 3.2E-6 | ||
PRINTS | 393 | 408 | 16 | 3.2E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0412500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…