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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0412800 |
| Transcript ID | LotjaGi4g1v0412800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT3G14880.2 transcription factor-like protein; Swiss-Prot: sp|Q58FV0|DOGL3_ARATH Protein DOG1-like 3; TrEMBL-Plants: tr|A0A1J7IHF4|A0A1J7IHF4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0412800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78853827..78855341) extracted from Lotus japonicus Gifu genome v1.2.
CAACAATCTATATAAAATACCACCTTTGTTTTCCAACCACAGTTTTCTCCTTTCACCTTTTCAGCTCAAATACACTGAAT CAATCAAATTGCCAGCCAGTTCCACAATCCAACGGCGAAGTTCCTGATTCAGAAATCAGAAAACCGCCAAAATATGTTGC AACCCCACTTGCAATAGGTTCACCCTCTATAAAAGCATGATGGACCATGGACATTGCTCTATTGGTTCATGCTTTAGTCA AACATTGACTAACAAGAAAAGAGTTAGTTTATAGCTATAGCTATGTCTGTGGCTCCAAGCAGTGCCTTGTACCTTTCACA TATCAGTGAAAATGGAAACTCTGAGGATGGGAGTTTCCACAAGTTTTTTGAGCTATGGCTGGCTGAGCAGAACCAGCACC TGAAAGATCTTTCAGAAGCTGCTGATGAATCAAGTGGGGTTGTCACAAGTGAGAGGGTTCAGGTACTGGTTGAGAGGGTG GAGGAGCATTATGAGCTCTACTACAAGGCAAAATCAAGGTGGGCAAAGCAAGATGTCTTAGCCATGCTGACCCCATCATG GAGGAGCACCTTGGAGGAGTCTTTTCTCTGGATTGGAGGGTGGAGACCCAGCATGGCATTTCACTTGTTGTATTCAAAAT CAAGCTTGCAATTTGAGGCAAGGTTGAATGATCTGATGCAGGGGATGAAAACATGTGACCTTGGAGATCTTTGTGCTGTT CAGCTTTCTGAGCTTGATGACATGCAGAGGAGGACTATTAGGGAGGAGAGGGAGCTCACTGATGTGATGGCAGAGCACCA GGAGACTGTGGCTGATGCTCCAATGGTAGAGCTATCTCATGTGCTCACTGAGATTGTTGGAGGAGGGAATGAAGGTGGTT GTGATAACAAGGAATTGGAAGAGAGGGTTGAGTCTGCTCTGGAGCCAAAGGTGGAGAAGCTGGAAGAGATTCTTCAGAAA GCTGATAATCTGAGGTTGAAGACACTGCAGGGGATTGTTGGCATTCTGACTCCACAGCAGGCTATTCATTTCTTGATTGC TGCTGCTGAGCTGCATCTGAGGTTGCATGAGTGGGGGAAGAAGATGGATGCAAAGAAAGGGAATCATCAAGGCCTTGATT CAACTATTTGAAGATTACAGCAGCACTTGGAATCAATCAAAGAGAATTGGGTGGAGGGTATCTTGGGCTAGCTTGGAGTT TATGTTGCTATTTTTACACAGAACAAGCTGAAGGAAACATGAAGAATAAAAGCAGCCCTTATATATCTTCTAGGAAGCTA GGAATAACATCAAATCAAATTAATAGCATGTTTGGATCATAATATTTTTCACCATATGAGTTTTTCCTTAGAATTAATTT TGGCATTAGAATTAATTGTGAAAAGATTTCCAAATATGTATTAGCTTAAATTAAAGAGGCTTAAATTTAAAGCCTGAACT ATATCATGAAATAAACCAGTGATCCTAACTTTGATTCAATTTTGAAATTGCAGTTTTGGCTTTGTTTCATATCAG
CDS sequence (LotjaGi4g1v0412800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGTGGCTCCAAGCAGTGCCTTGTACCTTTCACATATCAGTGAAAATGGAAACTCTGAGGATGGGAGTTTCCACAA GTTTTTTGAGCTATGGCTGGCTGAGCAGAACCAGCACCTGAAAGATCTTTCAGAAGCTGCTGATGAATCAAGTGGGGTTG TCACAAGTGAGAGGGTTCAGGTACTGGTTGAGAGGGTGGAGGAGCATTATGAGCTCTACTACAAGGCAAAATCAAGGTGG GCAAAGCAAGATGTCTTAGCCATGCTGACCCCATCATGGAGGAGCACCTTGGAGGAGTCTTTTCTCTGGATTGGAGGGTG GAGACCCAGCATGGCATTTCACTTGTTGTATTCAAAATCAAGCTTGCAATTTGAGGCAAGGTTGAATGATCTGATGCAGG GGATGAAAACATGTGACCTTGGAGATCTTTGTGCTGTTCAGCTTTCTGAGCTTGATGACATGCAGAGGAGGACTATTAGG GAGGAGAGGGAGCTCACTGATGTGATGGCAGAGCACCAGGAGACTGTGGCTGATGCTCCAATGGTAGAGCTATCTCATGT GCTCACTGAGATTGTTGGAGGAGGGAATGAAGGTGGTTGTGATAACAAGGAATTGGAAGAGAGGGTTGAGTCTGCTCTGG AGCCAAAGGTGGAGAAGCTGGAAGAGATTCTTCAGAAAGCTGATAATCTGAGGTTGAAGACACTGCAGGGGATTGTTGGC ATTCTGACTCCACAGCAGGCTATTCATTTCTTGATTGCTGCTGCTGAGCTGCATCTGAGGTTGCATGAGTGGGGGAAGAA GATGGATGCAAAGAAAGGGAATCATCAAGGCCTTGATTCAACTATTTGA
Protein sequence (LotjaGi4g1v0412800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVAPSSALYLSHISENGNSEDGSFHKFFELWLAEQNQHLKDLSEAADESSGVVTSERVQVLVERVEEHYELYYKAKSRW AKQDVLAMLTPSWRSTLEESFLWIGGWRPSMAFHLLYSKSSLQFEARLNDLMQGMKTCDLGDLCAVQLSELDDMQRRTIR EERELTDVMAEHQETVADAPMVELSHVLTEIVGGGNEGGCDNKELEERVESALEPKVEKLEEILQKADNLRLKTLQGIVG ILTPQQAIHFLIAAAELHLRLHEWGKKMDAKKGNHQGLDSTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 276 | 260 | 3.2E-101 | – | |
| PANTHER | 17 | 276 | 260 | 3.2E-101 | – | |
| ProSiteProfiles | 22 | 271 | 250 | 33.614 | ||
| Pfam | 39 | 118 | 80 | 1.3E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi4g1v0412800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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