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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0414800 |
| Transcript ID | LotjaGi4g1v0414800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|A0A151SU70|A0A151SU70_CAJCA Ammonium transporter; Found in the gene: LotjaGi4g1v0414800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79032108..79036531) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAGAATATGTAAGAATATTCAGAGGTCTCGTTAAAAAAAAAAGAATATTCAGAGGTCACTTTCAAAAATAAAAATAA AAATTCAGAGGTCAACCCTAGCTCTCTCTTACAACCTCGCATCATGTATACTACCCACTACGCACTAGCAATATATAAAG CCAACTTCATACTTACAAATTTCACACACTGACACAGCAATAACCATGGCTTCTCCTCCTTTGCCGGTAGCATACCAAGC ATGGACAAGTCTTGCAGTGCCGGACTGGCTCAACAAAGGAGACAACGCATGGCAAATGATAGCAGCCACCCTCGTCGGCA TTCAAAGCATGCCCGGTCTCGTCATCCTCTACGGAAGCATCGTGAAGAAGAAATGGGCCGTCAACTCCGCCTTCATGGCC CTCTACGCGTTCGCGGCTGTCATTATCTGCTGGGTCTCGTGGGCTTACAAGATGTCCTTCGGGGAGAAGCTCCTGCCCTT TTGGGGAAAGGCTGGCCCTGCTCTGGGCCAGCGCTTTCTCTTGAAGCAGGCTGCGCTGCCCGCTACCCCACATTACTACA ATGACGGGCGACTGGAGACCGCTGAGATCGAGCCATTTTACCCGATGGCGACCATGGTGTGGTTCCAGTGTGTTTTTGCC GCCATTGCGCTTGTCATCCTGGCCGGATCTGTTCTGGCCAGGATGAGCTTCAAGGCGTGGATGATGTTTGTGCCACTGTG GCTGACTTTTTCTTACACCATTGGTGCGTTTAGTTTGTGGGGTGGCGGATTCTTGTTCCAATGGGGTGTTATGGATTACT CTGGTGGTTATGTCATTCACCTTTCTTCTGGAATTGCTGGCTTCACAGCTGCTTATTGGGTTTGTTACTCTAATTTCTCT TTATCTTTTAGCTTGTCTATCCTAGACCAAAATATTTTAATTCATGAATGAATCAGTTTTTTTTTTTGGAATAAAGAATA TTCCACAAATAAAATATTCAATCAAGCAAAATTAGTCAAACCATTGGAAGCAAATCTCAATAACTGCAGGTATTGATTCA TGGAATCAAATCATAATTAACCACCATAAATTCTCTTAATACCATTTCCATATATAAATTATTACCGTTACCATGTAATG CTATATATGTATTTTATTTTTTGATTGGACACACAAGATACATAACCAGAATTCTTCAACACCACATTAATCTCTCCTAC GTCGTCTCTTTCTTTTTTCATTATTTTTAACATAGTGCATCTAGAATTTCCCTTTATCTGATAAATTTATGACATCAACA AGAAGAAAAAATGTATCTATATATATGTCTATTTAGTCAACACCAGAGACCCATTCTGTAAAATAAAGAAAAAAAAACAT ATGAACCTGTCTAGCTAAGAACTCATGATTATGTCCTTGTGACGATTGTTGTGACTGGTATATCACACATCCTGTTTTAG TTATTAATTAATTATATTTTTCTTTTCAAATTAACTGTGATTTACATATTCCCTAAATCTAGCAAGCCAAAGTTAGAAAG TAAGATGAAATGAGTATCATTTTACTGGCATGCAGAGAATCTCTGGGGGAATTCCTTTGTCCACATGTATTGAGTTGGTA GCTTGAAATCCAAAAATATCATTGCTCATCATCTTGTTACTTGTTATTTAAATTTTCAATGATAGAAGGGAATTGTTTGA TAGTGTTTGTAATCTATGCCAAGTTTTCCCATATATAGCTCCATTTAATGTCCTATATTACGGCCAATTGTTATATATCA AATAATTTACTTATATAGGTTATCCATGCTTTCACCTTCCATTCAAATGTGAACCTTTTCTAGGTGATGTTATCGATCAC AAGTTAACATATTGAAAAGAGGGGAAATCAATCAAATATGTATAATTTAAAATGTGAATATTAATATGTAAAAGTTAATT TAGAAATCTCTAGATGAGATGTGCACGGTAGATAGGGTAGGACAATGAATTTGTTTTTATGAGTTATGATTTATAAAGCT TAACGAACATTTTACACACTCTTAAATTTTCTCTCAATATCATTCTTCTTATTATATTATATCACATCATATACTGTATC AATTACTTTTCTCTATTTTCTTCATTTTTGGACTCCATGTGCTTACATTCATTAGGTGTTTACAGGACATGATTCTTTTT ATTTTATATAATGACATGCAATACTTTGAAATAGGTGGGCCCAAGATCGAAGAAGGACAGGGAGAGGTTCCCACCAAACA ATGTGTTACTAACGTTGGCAGGGGCAGGGTTACTGTGGTTGGGATGGGCAGGTTTCAACGGAGGAGATCCATACTCAGCC AACACAGACTCTTCCATGGCGGTGCTCAACACCAATATTTGTGCTGCCACCAGCCTCCTCGTGTGGACATGTCTTGATGT TATTTTCTTCAAGAAACCTTCTGTTATTGGAGCCGTTCAGGGCATGATCACTGGTCTTGTATGCATCACTCCTGGCGCTG GTACGTATATGTATATAACTTATTATCTTTCATAATATGTTTGGTTCTGCGGTGAAAAAAACTAAAAATAATCATGTATA GAAGTGATAGAGTATAGTTTTTGAAGTCAAGGTGCTACGAATTATTATGTGTTCTTGACTAATGATTCTACCAATTAAGG TTTCTTCATAATGCGCCACAATGAATCTAGTCAATCTACTATATTAATAAGTAATCTTCCTTTTAATATTTTTGGGTATG AAACCAGCTAGCTTAGGAGATTCCTTTCTTGACTTTGGGATCCCAAAAATCGAATGCTTAATATATGGGACATCTAATTT TGTAGATTAATTATTTTCTTATATGTTTAGTTTGTCTTCATTGGTCTTTCCCTCCTTCAATGGTGTCGGGTTTTACGTAT TTGAGGCGTGGGGAATTAGAAAATAGAGTTGAAGTAAGAAATATTCAATATTAGAGGACTCAGTCTCAAACTAACATTTT ATACCAAGGACCAATTGAGAAGTTACTACTTATAATTGTTTAGAATTTCATTAAAATTTAATGCATTAGTTATATGATAA CCCGAATTTATAATCTAATACAGAGAATCTTTACTCAGATTCCAACGACTTGATCCCTTACAGCATATTCACTATATACA TATCCAATATTTTATAAAATCAATGAATCAATATTAAGGGTTTATATTTCTGATTTTGGTGAAAAATATGAGTTCATTGA TTTTGATGACTTGATCATATAAGTCAATTTTTGTGAATGTGTAAATATAGGGATTTTTGGAAGTATGAAGTCCAAATTCA TCCCATATTCAATATTATGACTCATTGTAGATGACTTTTGATTTTTTTTTTTTGAAATGGACTTTTGAATATAAGTCTAC TGCATTCAAAGTGTGACTAATGCTACATTTCCGATGTAAAAAAAAAAGTGACTAATGCAAGTGTTCACTATTCACCTACA TTATTGAAATTTACCATCTCATGAACGAACTATACATGAATCCATAATCACAATATTGGTATATATTTTGTGAACAGGTC TTGTTCAAGGGTGGGCTGCCATAGTTATGGGAGTGCTTTCAGGCAGTGTCCCATGGTACACCATGATGGTATTAGGCAAG AAGTTGAAAATATTCCAAATGGTCGATGACACCCTTGCCGTGTTCCACACACACGCCGTGGCGGGCATTCTTGGCGGCGT ACTCACCGGCCTCTTCGCCGAGCCACGCCTAAGCACACTCTTCCTCCCCGTCACAAATTCCAAAGGAGGAGTCTACGGAG GCTCGGGTGGAGTCCAAATCCTGAAACAGATCGTGGGGGCTCTGTTCATCATTGGATGGAACATTGTGGCCACTTCAATC ATCTGTTTTGTTATAAGTTTCATAGTTCCGTTGAGAATGACAGAAGAAGAGTTGTTGATTGGGGATGATGCGGTTCATGG GGAAGAAGCTTATGCATTGTGGGGTGATGGAGAGAAACTTAGCCTCTACAAAGATGATACCACCCACCATAATGTTGTGA TGGCGTCAAGTGGTGCCACTCAAGATGTGTAGATATAATTGACACATGAAGATGAAAATGCTTGGATACACAATAAAAAT CACGACGAGTTAAAATCACAGGCTTTTGTCTGCGGTGATTTTAGTTTTATCATTTTCCGATTTTCGTACAGTTTTTTTTA TGACTCTGTTCAATGATTTCTTCATGTTAACTACTGATTGGTATTTCAGCTATAAATGTATGAAGCTATGCAATTATGTG TACTATTGTTATATTGTTATCTAAGCAATTATTTTTTTTTGAAAGTTATCTAAGCACTTCTTAATTGGGATATTGGGGCT TTGTTATTGTATTTAATACCGATGTTTATCAAATGAAGTTTGTCCCCGTAGTGTAATGTTGTTTACTTGTTAAGCATCGA GTTGAATTTTAATTTTATGTTTTC
CDS sequence (LotjaGi4g1v0414800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTCCTCCTTTGCCGGTAGCATACCAAGCATGGACAAGTCTTGCAGTGCCGGACTGGCTCAACAAAGGAGACAA CGCATGGCAAATGATAGCAGCCACCCTCGTCGGCATTCAAAGCATGCCCGGTCTCGTCATCCTCTACGGAAGCATCGTGA AGAAGAAATGGGCCGTCAACTCCGCCTTCATGGCCCTCTACGCGTTCGCGGCTGTCATTATCTGCTGGGTCTCGTGGGCT TACAAGATGTCCTTCGGGGAGAAGCTCCTGCCCTTTTGGGGAAAGGCTGGCCCTGCTCTGGGCCAGCGCTTTCTCTTGAA GCAGGCTGCGCTGCCCGCTACCCCACATTACTACAATGACGGGCGACTGGAGACCGCTGAGATCGAGCCATTTTACCCGA TGGCGACCATGGTGTGGTTCCAGTGTGTTTTTGCCGCCATTGCGCTTGTCATCCTGGCCGGATCTGTTCTGGCCAGGATG AGCTTCAAGGCGTGGATGATGTTTGTGCCACTGTGGCTGACTTTTTCTTACACCATTGGTGCGTTTAGTTTGTGGGGTGG CGGATTCTTGTTCCAATGGGGTGTTATGGATTACTCTGGTGGTTATGTCATTCACCTTTCTTCTGGAATTGCTGGCTTCA CAGCTGCTTATTGGGTGGGCCCAAGATCGAAGAAGGACAGGGAGAGGTTCCCACCAAACAATGTGTTACTAACGTTGGCA GGGGCAGGGTTACTGTGGTTGGGATGGGCAGGTTTCAACGGAGGAGATCCATACTCAGCCAACACAGACTCTTCCATGGC GGTGCTCAACACCAATATTTGTGCTGCCACCAGCCTCCTCGTGTGGACATGTCTTGATGTTATTTTCTTCAAGAAACCTT CTGTTATTGGAGCCGTTCAGGGCATGATCACTGGTCTTGTATGCATCACTCCTGGCGCTGGTCTTGTTCAAGGGTGGGCT GCCATAGTTATGGGAGTGCTTTCAGGCAGTGTCCCATGGTACACCATGATGGTATTAGGCAAGAAGTTGAAAATATTCCA AATGGTCGATGACACCCTTGCCGTGTTCCACACACACGCCGTGGCGGGCATTCTTGGCGGCGTACTCACCGGCCTCTTCG CCGAGCCACGCCTAAGCACACTCTTCCTCCCCGTCACAAATTCCAAAGGAGGAGTCTACGGAGGCTCGGGTGGAGTCCAA ATCCTGAAACAGATCGTGGGGGCTCTGTTCATCATTGGATGGAACATTGTGGCCACTTCAATCATCTGTTTTGTTATAAG TTTCATAGTTCCGTTGAGAATGACAGAAGAAGAGTTGTTGATTGGGGATGATGCGGTTCATGGGGAAGAAGCTTATGCAT TGTGGGGTGATGGAGAGAAACTTAGCCTCTACAAAGATGATACCACCCACCATAATGTTGTGATGGCGTCAAGTGGTGCC ACTCAAGATGTGTAG
Protein sequence (LotjaGi4g1v0414800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPPLPVAYQAWTSLAVPDWLNKGDNAWQMIAATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVSWA YKMSFGEKLLPFWGKAGPALGQRFLLKQAALPATPHYYNDGRLETAEIEPFYPMATMVWFQCVFAAIALVILAGSVLARM SFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLA GAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWA AIVMGVLSGSVPWYTMMVLGKKLKIFQMVDDTLAVFHTHAVAGILGGVLTGLFAEPRLSTLFLPVTNSKGGVYGGSGGVQ ILKQIVGALFIIGWNIVATSIICFVISFIVPLRMTEEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTHHNVVMASSGA TQDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 7 | 468 | 462 | 2.0E-277 | – | |
| PANTHER | 7 | 468 | 462 | 2.0E-277 | – | |
| Gene3D | 9 | 471 | 463 | 5.2E-128 | ||
| SUPERFAMILY | 21 | 434 | 414 | 1.26E-98 | – | |
| TIGRFAM | 26 | 452 | 427 | 3.1E-115 | ||
| Phobius | 28 | 50 | 23 | - | – | |
| Pfam | 28 | 452 | 425 | 1.8E-81 | ||
| TMHMM | 31 | 53 | 23 | - | – | |
| Phobius | 51 | 61 | 11 | - | – | |
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 62 | 81 | 20 | - | – | |
| Phobius | 82 | 137 | 56 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 138 | 158 | 21 | - | – | |
| Phobius | 159 | 164 | 6 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 165 | 190 | 26 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| ProSitePatterns | 197 | 222 | 26 | - | ||
| TMHMM | 201 | 220 | 20 | - | – | |
| Phobius | 202 | 220 | 19 | - | – | |
| Phobius | 221 | 231 | 11 | - | – | |
| Phobius | 232 | 252 | 21 | - | – | |
| TMHMM | 233 | 252 | 20 | - | – | |
| Phobius | 253 | 263 | 11 | - | – | |
| Phobius | 264 | 288 | 25 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 289 | 294 | 6 | - | – | |
| TMHMM | 294 | 313 | 20 | - | – | |
| Phobius | 295 | 313 | 19 | - | – | |
| Phobius | 314 | 318 | 5 | - | – | |
| TMHMM | 318 | 340 | 23 | - | – | |
| Phobius | 319 | 340 | 22 | - | – | |
| Phobius | 341 | 351 | 11 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| Phobius | 352 | 374 | 23 | - | – | |
| Phobius | 375 | 404 | 30 | - | – | |
| Phobius | 405 | 430 | 26 | - | – | |
| TMHMM | 410 | 432 | 23 | - | – | |
| Phobius | 431 | 484 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of LotjaGi4g1v0414800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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