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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0414900 |
| Transcript ID | LotjaGi4g1v0414900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT2G21120.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6; TrEMBL-Plants: tr|A0A151SUA0|A0A151SUA0_CAJCA Probable magnesium transporter; Found in the gene: LotjaGi4g1v0414900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79039373..79044223) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGTTCGAACAGCCAATTATTTTATTAGCGCCAGACTTTAATTCCCAACAAAAATAAAAAAAAACCAAAGTGGTGTCG TGTAGCGTTCGTTTTCCGTTCGAACTTCAGTAGCGTTCTCCGTAGCACTATTATCAGAATCGCAATCTTAGGGTTCCAAC TCCAATTCATGACTTCAATCCAATTCACAACCTTCTGCTACCTCTCTCCTTGTTCTTCCCACCCAATGTGAATGAAACAA CAACACTCACACAACACCACAAGGTAGATGACCTCAACCAATTTCACCGGTTTCATCTTGGCCGTGGTTTCCAGTGCTTT CATCGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTTCAACTCGCCGGTGTTAACGGTCCTCGTGCCAGTCTGTCACCTT AAATCCCTTCCTTTTCATTTTCCCCCAAAATTGCTAATCATTCATTCATACTGTGTATTGCATTGTACAGGTGTTGGTGG CTATGGTTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGATTACCAGTATGTACTTATTGTGTTTCCATTTATGTTTGG GAAAACAGCTTAATTAAGCGCTTATGGTTATAATCGTTTAGGCCCCGTTTGAAAAAACAACTTAATTAAGCACTTATGGT CATAAGCCACCATAAGCGCTTATGACATAATCACTTATTCATAAGCTATTTTAATTTTTTTATTGAAATAAATTGAAAAT AAGCTGTATATAAGCATAAACTCTTTTTCATAAGCTATCCCGAGTAGTTTATGAAAATAAGCTCAAAACAACTTATGGTA GCCGGTAGGCCATAAGCTGTTTGTATAAGCTCTGCCAAACACTTACACAAGCGCTTATGCTATCAAATAAGCTCTCCCAA ATGGGGCCTTATTCATAAGCTATTTAAAATAAATTATTGAAATAAATTGAAAATAAGCTATATATAAGCATAAGCTCTTT TTAATAAGCTAACCTGAGTAGCTTATGAAAATAAGCTCAAAACAGCTTATGGTAGGCTATAAGCTATTTGCATAAGCTCT CCCAAACACTGACATAAGCGTTTATGCTATCAGATAAACTAAAATAGGCTCTCCCAAACAGGGCCTTAGTCTTTACTTCA ATGTTTTCCGAATTTTTAATTATTTGTCTTGTTCCAGTGATTGTTGGAGAGATAGCGAATTTCGTTGCATACATTTACGC CCCGGCTGTGCTTGTTACTCCACTTGGTGCTTTGAGTATTATTGTTAGGTAAGCATTCACTAAATCACTTATGTTCTTTA TGTAAGGATGCTTTGTTTACTTTGTTTCGAATTTCGATTACCTTTCTGCTGAGCTAAGAGTTGCTATGAACTTGGTTAGT GCTGTCTTAGCGCATTTCCTCTTGGAGGAGAAGCTGCAGAAAATGGGCATGCTGGGGTGTCTTCTATGCATTGTGGGATC TACTGTTATTGTGCTCCATGCTCCTGAAGAGATGTCTCTTAGTTCTGTGCAAGAAATTTGGGAACTGGCCGTTCAACCCG GTATTCTATCAGGGTTTGATTTACTTTCCATTGTGAAATGCCCTGTGGCTATGTGGTTAATGGGTGTTTCCTGATTTTTG CTTTCTATTTTGGGTTACAGCGTTCCTCTCGTACACGGCCGCAGCCATTGCCGTGACATTGGCTCTTGTTTTGTATATTG CGCCCCGCTTTGGCCAGACTAATATTTTGGTTTATGTTGGAATATGCTCTGTAATTGGGTCCTTAACTGTAGGTGACTCT ATCCAATTAACCTTGTCAGTTATCACTACTTAATATGTGATAATTTTTTATCATTTTGGATAGTCCTGTTTTTCTGATAA AAATCTTACTTCTCAGGTCATGAGTGTGAAAGCAATTGGCATTGCAATGAAACTTACATTAGAAGGCGCAAACCAGTTTT TCTACTTTCAGACATGGATTTTTTCTACGGTTGCTATTACCTGCATCATTATCCAGCTAAATTACCTTAATATGGTAAGT ATCACTTATTTTATTGTGAAAAGTAGTTTTTGCATCGTGACATGAAGTGTTAAAATTCTCTGGCTTCTTTTAGGTATTTC ATTGAATTCTTTTGCTTTTTTCTTTCTGCTAGAGATATTTATTATGCAGGGTTAATTTGATTCTTTTAATCTTTTTAAAA ACAAGTCAGTGTTCTCTACTAATTAAGCTGGCTCTTTAAAAGTGACTGGTGTATTTTTCATACTGCTGTGAACTGTTCAT CCTACAACTTGGTCCATTTGTCTAGACTGAAGAATTTTAACTTTTAGGTTCTGATCATACTTCTATCAGTTTCATCTTTA CTTTCCTTTTCTTTGGTTGTTAACTATCATTATGGTCGTATTGTGTTTTCCTTGCCATTCTTTTCACTCCATGTGTCCAT TGAAGTTTTGTTCAACCTTCTTGAAGGCTATGAAGTAATCTAGAAGTCCAAGATGTAAACCTCTAATTCAAATAACATCC ATGTAATGCTTGAGCTGAAGCCCACCATAAGAACTTTTATTTACTGGAGTGTTGTTTCCATACCTTTTAATTGTTATCAT TTTCTTGCCATGGGATCTTCAATCTGGGCTTCTGTGCTAACCAATTCTTGCACGGTTGCAGGCACTGGATAACTTTAATG CAGCAGTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTTTAATCATGTTTAAGGTTGGT ATTCTTCAGAAACATAATAAGAAAATTTGTTTGCAGAAGGAGACATTTTATGATTCAACTATTATAATCCTTCCTCTCCT GCTTTTCTTATTCAGGACTATTCTGGTCAAAGTATAAGCAGTATTGTGTCAGAGTTATGTGGTTTCATCACTGTTTTATC TGGAACAACTGTATTGCACAGTACAAGAGAACCGGATCCTCCAGCCATTACAGGTAATATCTCATGCACCATAGTCTACC GTGGAGAACTTGGATAAGATAGACTTCTTACCGCGGACAGAACTAGGAAAAATATACCGTAAATTAAACACATATTTAGT AAAATCAGCAATAGCTCATTGGAGTAGATATTATAAACAAAACTTAGGGGGCGAATACACTATTTGAATACCATTCTATT AAGAATTTTTCCTCTTTGTGGGGGGGGGGGGGGTGCGATTGCCCCATTTTTTTAAAAAAAACTTAGTCTGTCCCCTGCTT CTTACGAATTATATGTGGTAATAGAGAGTATCTAGCTTTGCTTGACCTATTGGGTTACTTGACCTTATTAATTGTTTAAC CTGTTAAATAGTATGTTTACACCAAAGGCTAAACATAATACAAATTTTAGATAACTTGAAATAGATGCTCATGTTTCCTT GTTGCTGACTACTAGCTCCAGTTTTTACTTGTTAGTAGTCATGCAACTAAATGATTGATGATTTTTTTTCTTACATTAAA TATTGGAGGAAAAAAATATAGGGAAGATTTATGAATACATGTCATGTAAGATTCGTGAGATAGCTACATCTTGGATCTAA ATATTAATATGGATTACCTAGACGTTGACAATTGCTAGAAAATAATGAAGCTGTCCTGACCCATTTGAATACCAAAGTCG TTCAGTATGCTATTTCCTTAAGGTTTTAGCTTTTGGTGCTAAGCACTGAATATTACTACATCTTGGATCTAAATATTAAT ATGGATTACCTAGACGTTGACAATTGCTAGAAAATAATGAAGCTGTCCTGACCCATGTGAATACCAAAGTCGTTCAGTAT GCTATTTCCTTAAGGTTTTAGCTTTTGGTGATTAAGCCAAAATTGTAGTAATATTCAGTGCTTAGCAGCAAAAAATAAGG GAATTATTATGTTATGGGGTCAGTTCACTGCTGAGAAGTTTGAACTATCTAGATAAATGAGGGTGGGAAATCTTCCTAAA TAGAAAAAACAAGCAGAGTACAGTGAACTAAAGTGGCTCAAAAGTACAATAAAGCGATCGAGTTTCATTACATATCAATA TTACCACCACCATTGTCTAATTTGTGTATTGTAAATCTTGCCCTAATAGGATTTCAATATTTAAGGGCAGACTCTGATTT CTTAGCATAATTGGATGTGTTGAGTGTTGAGACGCTTCCTAGTGATCTTAAATCTGATTAAGTGATTGTTCTTCACATGC AGATTTATATACACCATTGTCTCCTAGAGTATCATGGTATATCCAAGGCAATGGTGAACCCTGGAAACAGAAAGAGGAAG ATGTTCCACCCATTAATTTAATCACAATTATACGGCAAGATCATTTCAAGTGACAGAGGTGCCCTAAATCATTGAGCTAT GGTATCTGTACATTTCATGTTGATTAAGCAACAGAAATTTGCCAGCACAATGGGGTTTGGCTCTGCTATATTCTATCACA TTGTGCAGTCAGAGGAGATATTGTTTCCTTTTTTCCAGAAATGATGGCTTGATTTCCAATGTTTCAAAGGGGTGATTATT TGCCTACTTTTCTTTTCTTTTTTGTAATCATCCTGTATCCCTTTTTCCCCATGTATTTCTTATTAATCTTTTCAGAGCAC CCAGTCTTTTTGTTTTTTTTTTTCTTTTTGTAAAATTGAAGAATGCTTCCTTGTTTTGGCAGATGGTAGAAGGTGATCCG TGTATATTGTAAAATACAGTTATTTTAGTAATTAACATTGAATTTGTCATTCATTGATAGTTTCCCTAAATTATGTTTAA CTCATTTTTTTTTTCAATTGCCTTTGGTAATAGGAGAGTGGAGGGAGAGAGAGTTCCATTGATATACAACTATTCATTGA GAATGAAAAATGTTGGATAATTAACTAAAGGTTTTTTTGTCAAAAAAAAAG
CDS sequence (LotjaGi4g1v0414900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTCAACCAATTTCACCGGTTTCATCTTGGCCGTGGTTTCCAGTGCTTTCATCGGCTCCAGCTTCATCATCAAGAA AAAGGGTCTTCAACTCGCCGGTGTTAACGGTCCTCGTGCCAGTGTTGGTGGCTATGGTTACTTGCTTCAACCTCTCTGGT GGGTCGGAATGATTACCATGATTGTTGGAGAGATAGCGAATTTCGTTGCATACATTTACGCCCCGGCTGTGCTTGTTACT CCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCTTAGCGCATTTCCTCTTGGAGGAGAAGCTGCAGAAAATGGGCAT GCTGGGGTGTCTTCTATGCATTGTGGGATCTACTGTTATTGTGCTCCATGCTCCTGAAGAGATGTCTCTTAGTTCTGTGC AAGAAATTTGGGAACTGGCCGTTCAACCCGCGTTCCTCTCGTACACGGCCGCAGCCATTGCCGTGACATTGGCTCTTGTT TTGTATATTGCGCCCCGCTTTGGCCAGACTAATATTTTGGTTTATGTTGGAATATGCTCTGTAATTGGGTCCTTAACTGT CATGAGTGTGAAAGCAATTGGCATTGCAATGAAACTTACATTAGAAGGCGCAAACCAGTTTTTCTACTTTCAGACATGGA TTTTTTCTACGGTTGCTATTACCTGCATCATTATCCAGCTAAATTACCTTAATATGGCACTGGATAACTTTAATGCAGCA GTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTTTAATCATGTTTAAGGACTATTCTGG TCAAAGTATAAGCAGTATTGTGTCAGAGTTATGTGGTTTCATCACTGTTTTATCTGGAACAACTGTATTGCACAGTACAA GAGAACCGGATCCTCCAGCCATTACAGATTTATATACACCATTGTCTCCTAGAGTATCATGGTATATCCAAGGCAATGGT GAACCCTGGAAACAGAAAGAGGAAGATGTTCCACCCATTAATTTAATCACAATTATACGGCAAGATCATTTCAAGTGA
Protein sequence (LotjaGi4g1v0414900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSTNFTGFILAVVSSAFIGSSFIIKKKGLQLAGVNGPRASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVT PLGALSIIVSAVLAHFLLEEKLQKMGMLGCLLCIVGSTVIVLHAPEEMSLSSVQEIWELAVQPAFLSYTAAAIAVTLALV LYIAPRFGQTNILVYVGICSVIGSLTVMSVKAIGIAMKLTLEGANQFFYFQTWIFSTVAITCIIIQLNYLNMALDNFNAA VVSPIYYALFTAFTILASLIMFKDYSGQSISSIVSELCGFITVLSGTTVLHSTREPDPPAITDLYTPLSPRVSWYIQGNG EPWKQKEEDVPPINLITIIRQDHFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 335 | 335 | 6.1E-203 | ||
| PANTHER | 1 | 335 | 335 | 6.1E-203 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Pfam | 5 | 295 | 291 | 8.0E-126 | ||
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 44 | 19 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 45 | 66 | 22 | - | – | |
| SUPERFAMILY | 50 | 123 | 74 | 6.67E-9 | – | |
| Phobius | 67 | 71 | 5 | - | – | |
| Phobius | 72 | 98 | 27 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 99 | 104 | 6 | - | – | |
| Phobius | 105 | 125 | 21 | - | – | |
| TMHMM | 105 | 124 | 20 | - | – | |
| Phobius | 126 | 144 | 19 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 145 | 165 | 21 | - | – | |
| Phobius | 166 | 171 | 6 | - | – | |
| Phobius | 172 | 196 | 25 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 197 | 207 | 11 | - | – | |
| Phobius | 208 | 230 | 23 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 231 | 236 | 6 | - | – | |
| Phobius | 237 | 262 | 26 | - | – | |
| TMHMM | 239 | 261 | 23 | - | – | |
| Phobius | 263 | 345 | 83 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0414900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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