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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0418200 |
| Transcript ID | LotjaGi4g1v0418200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SUMO-activating enzyme subunit 1; TAIR: AT4G24940.1 SUMO-activating enzyme 1A; Swiss-Prot: sp|Q8VY78|SAE1A_ARATH SUMO-activating enzyme subunit 1A; TrEMBL-Plants: tr|I3SJS2|I3SJS2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0418200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79362362..79366164) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCATTGCAGCGTTGATAATGGGCTAGTGAAAGTCCATATTCATTATTAAGTCAAGATCAGAAAAGCCCAATAGTTGC TTCCACAGACATTCACCGACGATTACCCCGCCGCGCCGTTGCTTTCAGTGTTGTTATTTTCGAACAGAAACTGAAAATTT CCGACGATATCACGGAGCAGGTTGCGGCTAGGAATGGACGGCAACGGCGAGGAGTTGACGGCGCAGGAGACCGCTCTCTA TGACCGTCAGATTAGGGTTTGGGGAGCAGACGCTCAAAGAAGGTGCGTGCGTTGTTTGCTATTGTCATGTGTCTAATTAT ATATAGTGTTTTGAACAACTCTACTTCGTATTTTAATGTTAGTTTTTGCTTATGTTGTTGTAGATTAAGCAAATCTCATG TTTTGGTCTATGGAATCAAAGGAACTATAGCTGAGGTAAGCTTAGAAGTTAGAACATGTCTTGTTTTATTTTTTTTGTTG CAATTTTATTTCTCATGTTTTTTCTTTTTCATTTTTTCTTTTTAGTTTTGCAAAAATATTGTGCTGGCTGGAGTGGGTAG TCTCACCTTAATAGATGATAGGGTTGCTAGTGAAGAATCATTCTCCTCAAACTTTCTCATTCCTTTGGATGAGAATGTGT ATAGTGGAAAGACCCTTGCTGAGCTTTGTTGTGATTCACTTAGAGACTTCAATCCTATGGTTCGTGTTTCCGTGGGAAAA GGTTATTGTTTTCATCCTCCCCCTTGTTAATTTGTTTTGTGTTGTGTTTGTACTTTCCTGATGTTCAATTTTTTTTCAGG TGATTTGTCAAGTTTCGATGAAGAATTCTTCAGCGAGTTTGATGTTGTTGTCGTCAGTTGTTCCTCACTATCTGCCAAAG TACTTTTCAGAACTCTATCTGATATATATATATATATATATATATATATATATATATATATATGTTGTTGTCATGATTTA AATTCTAAATTACTTTCCCCCTTTATGATATTGTAATTTTTATTTTAACTATCTTGTTTGCGTTTATTTTTGTTCTGTAG AAATTGGCTAATGAGAAATGCCGGAAGCTATCAAAGCGTGTAGCCTTCTATACTGTAGACTGTAGGGATTCTTGTGGTGA AATTTTTGTTGATCTGCAGGACTATAGTTATTCCAAGGTATCACTCTTGTGGATCAAATTCCCCACTGTTAATTATCAGC TTAGACTAAGGTTCATAGACAACTCCAAATTTCTATTCTACGTAAAATATATTACATCATTGCTTTTAGGGAATTTTTAT TGCAATTAGTGATAAAGGCCACAAGGGCAGAATTATAGGACAAAAGTCACAAAAACAGAGAACCTAGTGAAAGTATGGAT TGGGATCGCTAAAACTTTTGATGCCTATATTTTTAATGATGCTTGTGTTTCAGATTGTGGTTTGTTGACTATTTGATAAT TAAAGCTCATGAGATTTTTCTAGAACATGTGGTTTTTTATGGAACAACTAATAAATAACTTTTGTGATTGGATCTTGGAA GTTTTAAATGGTAAGTGTCCGAGGACTTATTCTTCTGCAACCACTCATTTTTTTTAATGCTTTTTTCTTCTTTGGCAGAA AAAACAAGAGGAAACTATTGAATGCCACCTAAAATATCCATCTTTTGAGGTATATGTTATTCTTAACTATTAAGTTGTAT TGCTATCTTTCATATTTAAATGTCATGTTAAAAAGCTCAGTTTCTGTTTCTCGGAATGATATTTAGTTATTTACTATTTA GGGCTGGGTCTTGACTAGTTTGCAATGATGCAACCCTCCAGACCTTCATCGTGTTCAAGTGATCTATTTTTTTATTGACA GAACAAAAGAAAATAACATAACAATCTAGTAGAGAGAAAATAATAGACTGATTTTGACCTGAAGCCTGGAGGATGTATGG TGCGCCTGATAGTGCCCCTGAGAGCCCTACATTTACTTACATTAGATGCCTGTGGGCCCTGGGTTGAGTATCAATTGATA ATTTTTGTGAAGCTCATAACTTCTGAGTAATCCTTTATGAAGCTCATATGCTATATGTGGGATTATGTTATGGTGCATTT CATTTTGTCTTAGTTCTACATGACATTTACAGTATCCCTATTTGTGTTTCATATTTTACTTTACTGACATTTAGTCATGA TTATCACTTTATTTTGCGCTGCAGGAAGCATTATTGGTACCTTGGAGGGAACTTCACAGGAGAACGTCTAAGTTGTACTT TGCAACGAGAGGTTTGTAAACTGTACAGTTATTTTTATTTGTAAATTACATAAATTAAGAACAAATAATTCAAATCTTTT GAACTTTAAAACTTTTAGTTGTTTGCTTAAGTGGTCCTATTGATTGAGTCCATCGATTATGTTAGGAGAGGAGATGTCGA GAGGAAGCTTACATCTTCCATATTTTCTGTTGTCTTATGCATGAAAAAATAGACTTTTTTCTGTTTTTTATTTTGGATAG ACATGCCTTAAGACTGGCTTTCAATCAATAACATCAATTGTTTGATGCAGTAATAGAAAAGTTTGAAGAGGCTGAGGGGC GTAGTTCTGGAGAAGTTTCAACTGCAGATCTTTCTGGTGTTCTCAAACTGAAAAAGGAGCTTTGTACTGCACAAGTATGC TTGTATAAATTTGTTATTTATGCTTTAAGAATGCGTCATTCACTTCTTCTCTTTTTTTGTTGACAGTCTCTCAATGAATC TCATGTGCCTGATACTCTTCTCGAGAGATTGGTGGCGAATACAAATGAATTTCCTCCAGTTTGTGCTATTATTGGGGGAA TCCTTGGACAGGTATTTTCTGTTTTCAATTTTTAATTGTGTTTTGAAAGTGTGTAGTGATATTTAACTGACTAGGTTAAC TATTGTATGATTGTATCATCTCAGGAGGTTATCAAAGCTATTTCTGGGAAAGGAGACACCCTAAAAAACTTTTTCTTTTT TGATGCCTTTGATGGGAAAGGCATTGTAGAAGACATTTCTAATTTAAATCCTCTGAAGTAAATGACAAATCCTGGTAAGT GTTTTTTGTCAGAGGCACCGGGAATCTAAACTCTAAAGTGTGGAAAATTAAACACTAGATAGCTAGTTATATTTTGTAAG TAGAGGTTCAAACTGAAATTGTACTTAGAATTGTTATTTATTCACCACAATCAACCAATCTTTCTAAGATTTTTTGGTTC CACAAGTAGACCTATGCTACCTTATTCTACAATGGAGTATCATTACACAATTGGTTGTATATGTGATAGTTTTGCAAGAT TTGCTCAAAGCTTTCAGCTGACTTCTCGACAGGGTGAATATGCATCCCTTCTTAGGTTGACACCACAATCTGCTCATCTT CTGAGCAGCGTTGGATTTGTTTCTTCACATTACATCCGCGATAAGTGCACCTATAGTAATGTCTGAAAGCAGGAATGTAA AATTTAGATGAAAATTAAGCAAGATCAGGATTCAGGACCAATCAATTGCAAAATTGAAAAAAAAAAAATTGTTAATGTAA TAAGGGTAAGTTACCATATTAGCCAGACCGAAATCCATTTATTTTTTTGCCTTAGATGTACCAATCAGCTATGTTGCTTA GAGACATGTATTGGTTTTTATACTACGAAATTGCAATCACAGGATAGAATCTATTAATGAAGTAAGGCTATACCTAGGAA ATTTTTTGTTTTTCACCGATTTTTTACCATACTTTCTCCATCGGTACCCATCGTCCAGTATATCAATCGGACTCCTTGTT TGGAACACATACTTGTGTTGTGTGATTTTTCTGTGTCCTTTCT
CDS sequence (LotjaGi4g1v0418200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGCAACGGCGAGGAGTTGACGGCGCAGGAGACCGCTCTCTATGACCGTCAGATTAGGGTTTGGGGAGCAGACGC TCAAAGAAGATTAAGCAAATCTCATGTTTTGGTCTATGGAATCAAAGGAACTATAGCTGAGTTTTGCAAAAATATTGTGC TGGCTGGAGTGGGTAGTCTCACCTTAATAGATGATAGGGTTGCTAGTGAAGAATCATTCTCCTCAAACTTTCTCATTCCT TTGGATGAGAATGTGTATAGTGGAAAGACCCTTGCTGAGCTTTGTTGTGATTCACTTAGAGACTTCAATCCTATGGTTCG TGTTTCCGTGGGAAAAGGTGATTTGTCAAGTTTCGATGAAGAATTCTTCAGCGAGTTTGATGTTGTTGTCGTCAGTTGTT CCTCACTATCTGCCAAAAAATTGGCTAATGAGAAATGCCGGAAGCTATCAAAGCGTGTAGCCTTCTATACTGTAGACTGT AGGGATTCTTGTGGTGAAATTTTTGTTGATCTGCAGGACTATAGTTATTCCAAGAAAAAACAAGAGGAAACTATTGAATG CCACCTAAAATATCCATCTTTTGAGGAAGCATTATTGGTACCTTGGAGGGAACTTCACAGGAGAACGTCTAAGTTGTACT TTGCAACGAGAGTAATAGAAAAGTTTGAAGAGGCTGAGGGGCGTAGTTCTGGAGAAGTTTCAACTGCAGATCTTTCTGGT GTTCTCAAACTGAAAAAGGAGCTTTGTACTGCACAATCTCTCAATGAATCTCATGTGCCTGATACTCTTCTCGAGAGATT GGTGGCGAATACAAATGAATTTCCTCCAGTTTGTGCTATTATTGGGGGAATCCTTGGACAGGAGGTTATCAAAGCTATTT CTGGGAAAGGAGACACCCTAAAAAACTTTTTCTTTTTTGATGCCTTTGATGGGAAAGGCATTGTAGAAGACATTTCTAAT TTAAATCCTCTGAAGTAA
Protein sequence (LotjaGi4g1v0418200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGNGEELTAQETALYDRQIRVWGADAQRRLSKSHVLVYGIKGTIAEFCKNIVLAGVGSLTLIDDRVASEESFSSNFLIP LDENVYSGKTLAELCCDSLRDFNPMVRVSVGKGDLSSFDEEFFSEFDVVVVSCSSLSAKKLANEKCRKLSKRVAFYTVDC RDSCGEIFVDLQDYSYSKKKQEETIECHLKYPSFEEALLVPWRELHRRTSKLYFATRVIEKFEEAEGRSSGEVSTADLSG VLKLKKELCTAQSLNESHVPDTLLERLVANTNEFPPVCAIIGGILGQEVIKAISGKGDTLKNFFFFDAFDGKGIVEDISN LNPLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 320 | 319 | 4.3E-93 | – | |
| PANTHER | 3 | 319 | 317 | 1.9E-124 | – | |
| PANTHER | 3 | 319 | 317 | 1.9E-124 | – | |
| SUPERFAMILY | 10 | 317 | 308 | 7.32E-68 | ||
| Pfam | 16 | 310 | 295 | 2.5E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-like modifier activating enzyme activity | Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond. |
Expression pattern of LotjaGi4g1v0418200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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