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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0424800 |
| Transcript ID | LotjaGi4g1v0424800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 2A regulatory subunit B; TAIR: AT5G18580.1 tonneau 2 (TON2); Swiss-Prot: sp|Q9FEE2|TON2_ARATH Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2; TrEMBL-Plants: tr|B9RT18|B9RT18_RICCO Tonneau, putative; Found in the gene: LotjaGi4g1v0424800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79967534..79971938) extracted from Lotus japonicus Gifu genome v1.2.
ACCGCGGCCATGTACAGCGACGGCGAAACTCATGACGCTTCCCAGAGGAAAGTCCCCCCGGCTTCCTCCATGCCGTGGGT GCGCAACCTCCGCCGCTTCATCGGATCCGGTCAAGGCCTCGGCTCCGAAGCCTTAATGGGTTCGTATTCATTCCCTCTCT GAACCTTTCCGATTAGATTTCGCAAACTCTGACAACCCTTTTACTCATTTGCAGAGCTTGAAACAAAGAGAATCTTGCTT GACATTTTCAAAGAAAAGCAGAAGAAAAGTGCTGAAGCTTCTACAATTCCAAGTTTCTACAAGAAGGTATGTCAAACTAA CATTGCTTCTTCATGTTATTCAAGTTCAGTTTGTGTAATTTGTGAATATTGATATGATATGCTTCATCTTCATCCAGAAA CCTGAAGAAGGATCAATAAGTCATAGAGTTCAGAGATTGGCAAAGTATCGTTTTCTTAAGGTGCCATTTTCTCGCGTACC GCTCTGTTAGTTATATGCACTTACATATTTTTCACAATTAATGACATTCCTGGTATATTGAACAGAAACAATCAGATCTT TTGCTGAATGCTGATGATTTGGATGCAATGTGGGTCTGCTTAAGAGAAAATTGTGTCATTGATGATGCAACTGGTGCAGA AAAGGTCTACCACTTTCGCCATGTGTTTATCTCATTTAATTATTTCATGTTACTATGGATGCTGCTTTAATTATTTCTTA CAGATGAATTATGAAGACTTTTGCCACATTGCCTCAGTATGCACTGAGCAAATCGGTCCTAAATGCCGCCGCTTCTTTAG TCCTTCAAACTTCATGAAGTTTGAGAAAGATGAGCAGGGGAGAATTGCTATTCTACCCTTTTACCTTTATGTGATGCGTA CGGTAGGTCACCAGCCAACGTTTACTATTTTAGTGGTATTGTTGTTTAATTCTCCTGAATACGGAATACCTCATTAAATA TGCGGCTTTGTGTTTCGTATCTCCATTACAATTTACATTGCTTGCTTGTATCTTGAACTTGATGAATGTATCAAATGTTT GAAAGCTACCTAATGATTGTGGTTGTGCAGGTTTCACTTACACAGGCAAGGATTGATATGAGTGAGCTGGATGAGGATTC TGATGGTTTCCTTCAGCCACATGTATGGATTCTTTTTTCTATTAAGCTTCCTATTGCTTACATTTAACTATCAGTTTGGT ATGTCTTTTTTTGTTATACAGTTTTATAGGAAATATTTGCATCTTTGGTGGAATTTTCTGATTACGATTAACATATCATG AATATCTATGAATTTTTTTTGTTTTATTTCTTTTCTCTTGTTTGAGACAAGTTTTATTTCCCCCGCATAGCAACATTTCA CCTGGCCAACTATCTATATGGAATTATATCTCTTGTTTCAGTTTTTATTATGACTATCTAGCCTTCATTTTAGCGGTATG CATTTTGTGCTTACATTCCAACCTTAATTTGACTCAGGTAATTGATGCCCTTTGGCTTCAATTTTTGAGAATTCTATCAG TTGGAGTATTTTACTTATTGTGCTCAATATGAAGCTGGGAAACAAACTGCAATTGAACAGTTTCACATATAAAAATATTA GGTTACCTTGATACATATATATTTTTTACTTTCCTTTTCAGGAAATGGAGGCCTATATACGAGGTCTTATACCCAACTTG GCTCAATTACGTGATATGCCAGCAGCCTTTGTTCAAATGTACTGTCGTATTGCTGCACACAAATTCTTCTTCTTTTGTGA TCCTCATAGACGAGGTTTGTATGGCTCATATCTTTAGGTCCTGTTTTATGGTCATATTATCCTTTATTTAGACCTATTTA TCACTATATAAGATATGGTTTCTTCCTTTAAATTTAAAATAATTAATTAGAATTTTATTGCAGTAAAAACCAAATGGATT ATAATCCATATTGCACCTTTTCAGGAAACAATATTTGCTGTTTTTTCAAATGTAAAACTGATAGAAATTAATGACATTAT ATAAAATTTTGAGTTTTTCTATGTTCAGAATCTTACATATGCTGCAGTCATGAGAAAAAATGAAACAGTAAACATGAACT CTCGAAATGGTTTCATGTAGAAAGTCCTGTCCTCTCGTACTGGGCTTCATTAAATAAAAGCTCTTAATCCATAGATTCTA ATGCCAATTTTCTGACAAAGTTGATCACAATTTGCTTAATTCTACTTCAGTTGATGCAAAATATTATATGCATGTAGTAT TATCGAAATCTAAATAATTACCTTTTTGACACAGGAAAAGCTTGCATCAAGAAAGTGTTGCTTAGTAATTGTCTCCAGGA ACTAATGGAGCTTCACCAGGTAGGTTGTATTTGTATTAATAAATTTTCTTAATATATTTGGAACTAAACATCATAATATT CAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCGTGTGTGTGTGTGTGTGTGTGTGCGTGTGGTCGGTTCCTCT TATCCAGGGCCTCCTGGTGCTTATCTGTTTACACATTACCTCACAATTCTTTTACTTTATTTTTGTTTTAACTCTTTGTT TTGACTTAAACATGATGAGTATGCTGTTGTGTATTACAGGAAAGCGAAGAAGAAGTTACAGACACAGAACAAGCTGAAAA TTGGTTTTCTTTGACTTCTGCTCAACGAATATGTGGTGGGTATCTTACATAGTTTTAGGTTTCTGGACTCGTTTACCTCC TGCTCTTGATCCATTCTACTCCCTTCTTTGCCTGATTTTGATTGTGATATGATAAGTGTTCATTTTAGGAAGCCTCAAGC CTCCTATTGTGAGGCTGGGAGGGCGTCTGTGAGGATGAACCGTAGAGGACCAGAAAGGAGTATCAGACGAGTGAGGTCCT GTTGTAACAAAAAATATATAATAGGAGAGAGTAGGGAGGAAGCAAGAAAGGAGTATCAGAAGAGTGTGCATTAGAGAGTT CAACGACTCTCAAATATCGCTGTTACCCCCCCCCCCCCCATCGTATAGTTCATCATAAATCCAATTACAGCATTGCTTCT ATATAGTTCATCATAAATCCGATTACAGCATTGCTGCTATGGCACTGATATCAGTAGTTATACTGAAATACTACAGTTTC TCCTTTGCATTCTGTTTATTCTGGTCAAGTTTCTATCACTTTAAAGTTTAAAAACAGGCCTCAATTTCATAAGAATTGAC TTAGAGTTCAAACTATTTATCATTTTGTGTTGTGTGTCCTTAATTTTTCTGCAGACATGTTTCTTGCCCTTGATAAAGAT GCAAATGGGACATTAAGCAAGCAGGAGCTGCGAGAATATGCAGATGGGACCCTAACTGAGATTTTTATTGAGAGAGGTAG AAATTATTACCATTTTTCATTTATGGTGTAAATTTTGGAGAATAATGACCATCTGCGGAACCCATTCCCTATTCCAGAGT GCTATATGGTTATAATAAAGCCATGGTTACTATCATTGTATGCTCTCCATTCTACTGTGCTATAGTTTTTTACTGCTGGA TTGCAACATCATTTCAGGCTAGTTTAGGATAGTGCATTGTGTAATTTATAGAATTATAGTTTGATCCTCATTGTCTTTTG TTTTTTTCTTTAAATGAGAACTAAATTAGTAAATTTGCTTTTTATAGTATATGATGAACATGTTCGCCGCGGAAAGACTG GTGGCGGGAATGCCCGCGAAATGGATTTTGAGAGTTTCTTGGACTTTGTTCTGGCTTTAGAAAACAAAGACACCCCAGAA GGCATGACATACTTGTTTCGGTGCCTTGATCTTCAAGGAAGGGGTTACCTTACGACTGCTGATATTCACTCACTTTTCAG GTAAACTATCATGCTGCTCATACACTACCTATTTAGTATTTTACCTCTTATCTTTTGATTAGTGTTTGTTTTCTAAACAA GTTAATACAATTATTGGAAGTATAGAAGGGGAGCATCCATATGCTGGGATGTTGCCTGATACAATCTTCCTATAGAAAAA AACAAACTGTTGTTTTCCTGCTTGTAGTGCTTGAGCAAGTCCTACAAGTCTCAAATAGACAGTGACATTAGTTAGAACTT AACTAACAATTTGATTTACTAATCATATAATTTGGCATTATTACTTTTGACATGTCACTGACATGTTTTTTAATGGAAAA AAAACAGAGATGTACACCATAAATGGATTGAGGGTGGCAACTATGAACTTTGTATTGAAGATGTACGCGATGAAATCTGG GATATGGTTAAGCCAGCAGATCCTCTCAAGATAACATTGTCTGATCTATTAGCCTGCAAGCAGGGCGGAACGGTAGCTAG CATGCTCATAGATGTGCGTGGTTTCTGGGCTCATGACAACAGAGAAAATCTTCTCCAAGAGGAAGAAGAACCGGAGGAAG AATAG
CDS sequence (LotjaGi4g1v0424800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAGCGACGGCGAAACTCATGACGCTTCCCAGAGGAAAGTCCCCCCGGCTTCCTCCATGCCGTGGGTGCGCAACCT CCGCCGCTTCATCGGATCCGGTCAAGGCCTCGGCTCCGAAGCCTTAATGGAGCTTGAAACAAAGAGAATCTTGCTTGACA TTTTCAAAGAAAAGCAGAAGAAAAGTGCTGAAGCTTCTACAATTCCAAGTTTCTACAAGAAGAATATTGATATGATATGC TTCATCTTCATCCAGAAACCTGAAGAAGGATCAATAAGTCATAGAGTTCAGAGATTGGCAAAGTATCGTTTTCTTAAGAA ACAATCAGATCTTTTGCTGAATGCTGATGATTTGGATGCAATGTGGGTCTGCTTAAGAGAAAATTGTGTCATTGATGATG CAACTGGTGCAGAAAAGATGAATTATGAAGACTTTTGCCACATTGCCTCAGTATGCACTGAGCAAATCGGTCCTAAATGC CGCCGCTTCTTTAGTCCTTCAAACTTCATGAAGTTTGAGAAAGATGAGCAGGGGAGAATTGCTATTCTACCCTTTTACCT TTATGTGATGCGTACGGTTTCACTTACACAGGCAAGGATTGATATGAGTGAGCTGGATGAGGATTCTGATGGTTTCCTTC AGCCACATGAAATGGAGGCCTATATACGAGGTCTTATACCCAACTTGGCTCAATTACGTGATATGCCAGCAGCCTTTGTT CAAATGTACTGTCGTATTGCTGCACACAAATTCTTCTTCTTTTGTGATCCTCATAGACGAGGAAAAGCTTGCATCAAGAA AGTGTTGCTTAGTAATTGTCTCCAGGAACTAATGGAGCTTCACCAGGAAAGCGAAGAAGAAGTTACAGACACAGAACAAG CTGAAAATTGGTTTTCTTTGACTTCTGCTCAACGAATATGTGACATGTTTCTTGCCCTTGATAAAGATGCAAATGGGACA TTAAGCAAGCAGGAGCTGCGAGAATATGCAGATGGGACCCTAACTGAGATTTTTATTGAGAGAGTATATGATGAACATGT TCGCCGCGGAAAGACTGGTGGCGGGAATGCCCGCGAAATGGATTTTGAGAGTTTCTTGGACTTTGTTCTGGCTTTAGAAA ACAAAGACACCCCAGAAGGCATGACATACTTGTTTCGGTGCCTTGATCTTCAAGGAAGGGGTTACCTTACGACTGCTGAT ATTCACTCACTTTTCAGAGATGTACACCATAAATGGATTGAGGGTGGCAACTATGAACTTTGTATTGAAGATGTACGCGA TGAAATCTGGGATATGGTTAAGCCAGCAGATCCTCTCAAGATAACATTGTCTGATCTATTAGCCTGCAAGCAGGGCGGAA CGGTAGCTAGCATGCTCATAGATGTGCGTGGTTTCTGGGCTCATGACAACAGAGAAAATCTTCTCCAAGAGGAAGAAGAA CCGGAGGAAGAATAG
Protein sequence (LotjaGi4g1v0424800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYSDGETHDASQRKVPPASSMPWVRNLRRFIGSGQGLGSEALMELETKRILLDIFKEKQKKSAEASTIPSFYKKNIDMIC FIFIQKPEEGSISHRVQRLAKYRFLKKQSDLLLNADDLDAMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKC RRFFSPSNFMKFEKDEQGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPAAFV QMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSLTSAQRICDMFLALDKDANGT LSKQELREYADGTLTEIFIERVYDEHVRRGKTGGGNAREMDFESFLDFVLALENKDTPEGMTYLFRCLDLQGRGYLTTAD IHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGTVASMLIDVRGFWAHDNRENLLQEEEE PEEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 480 | 461 | 1.1E-217 | ||
| PANTHER | 20 | 480 | 461 | 1.1E-217 | – | |
| SUPERFAMILY | 169 | 331 | 163 | 9.08E-7 | ||
| ProSiteProfiles | 193 | 228 | 36 | 8.349 | ||
| ProSitePatterns | 206 | 218 | 13 | - | ||
| Coils | 274 | 294 | 21 | - | – | |
| SUPERFAMILY | 288 | 451 | 164 | 2.47E-19 | ||
| Gene3D | 298 | 471 | 174 | 3.4E-44 | – | |
| ProSiteProfiles | 301 | 336 | 36 | 10.971 | ||
| ProSitePatterns | 314 | 326 | 13 | - | ||
| ProSiteProfiles | 376 | 411 | 36 | 7.205 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Biological process | Regulation of dephosphorylation | Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule. |
Expression pattern of LotjaGi4g1v0424800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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