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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0429200 |
| Transcript ID | LotjaGi4g1v0429200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80338870..80340995) extracted from Lotus japonicus Gifu genome v1.2.
ATTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACAACGTAAGTGTCGTCAAACCACTATCTCCTCCTCCGCTT CCTCTTCTACTTCTTCCTCTCCAAACGACACCGTTTCCACCCGCACTCGCGATGCCACCACCGCCACCATAACAACCCAC GAACCCGAACCCAACCCGCAATTACCCGATTCACCTTCAACCTACTACAGATTCCGATTCTCCCCTGGCAAGTCTTCCCC AGTCATGGACTACACTCACTCTTCTCCGCTTTCCAACGGACATTCGGGTCCGGGTCAGGGTCATGACCCGTTTCCTTCCA GCTTCTCCAAGTTCAACAACGCCCTCACCGCTGGCCTCCTCAACCCAATGTCGCCGCCGCCGGATAAACCCCGCTCCAGC CCCACCCTCTTTGAAATGATGGTTAGCGAACCGGATATCAATCATCACAGAAACCAGATCCCGCCGAGTAACAACAACAT TGCCGCACCGCCGATGCAGAAACCGCAAATTCCGGTGATGGACCGGCAAACCCTGATGATGCAGCGGATATCGGAGTTGT TAGGTTCTCGGAGCCCCGGGAATCAGTTCAACGACCCGACTAACAGTGACATCAAGCTCACGCTCAGCTCCAAAGATGGG TTTAGCATCTCCATGAACGTGCATCGCCAGATTCTTGTTGCGCATAGCAGATTCTTCTCGGTGAAGCTCTCTGATCGCTG GACGCAGCAGCAGAACCGGTCGGCGTTGCCTTATCTTGTTGAGATTGCTGATTGTGATGATGTTGAGGTTTATGTTGAGA CTTTGAGGTTGATGTACTGTAAGGATCTCAGGAAGAAGCTCATGAAGGATGATGTTTCCAGAGTTCTGGGTATCTTAAAG GTAATGCCTGAATTGTGTGCTCTGTTCTATTGGTTGGATAATGTAAACTCTAGGATTAGGTTGAGACTCTAGCTAGTTTG GATTGGTGATTTCCACTGTTTGTGGGACAATTACATGATAGAAATTCTGTTGTTCAGGTTATTATATTACTTACTTACTA GTTTTGTTTTGTCATTTGAATTTGACTGATTCATAGTTTTATGATAGTTGCTGGTTTTTGTGGTATCTTAGGTTTCAGCA ACAATTGAATTTGACTGATTCATGGTTTTATGAGACTGAATTGAGTTGCTTGTTTTTTTGGTAGGTTTCAGCAGCAATTG GATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCCCCATGGGCTGAGGATGAAGAAGAAAAGGTGGCC TCGCTCCTGTCGGAGCTTCGTCTTGATTCTGTTGGAGCTGGAGAAGTTTTGAAAAGGGTTTCAATTGAAGTTACCCATGG AAATGAAGAGGGGAGTGATAATGAGGAAGTTCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGCAAAGATGAGAAGGCTA GACGTGAAATGAAAGGGTTGGTGTCAAAGATGCTCCGTGAAAATTCTTCACAGAACGATCTTCGGAAGGAGTCTATATAC TCGGCATGCGATGATTGTCTTCAGTTACTTCGTCTCCACTTCTTACAGGCTGCAGCTTCGGACATGCGGGATGTAAGTCA AATTGCAAGGCAAGCAGATAATTTGCATTGGATCTTGGATATTTTAATCGATAGACAGATTGCTGAAGATTTCTTGAAAA CATGGGCTTCTCAATCAGAATTATCGGAAGCGCATGCTAAAGTTCCTGCAGTTCATAGGTTTGAGATTAGCAGAGTTACA GCGAGATTGTTTGTTGGGATTGGGAAAGGACAGTTATTGGCTTCTAAAGATGCTAGGTGTTTACTTCTAAAAACATGGCT GGTTCCCTTTTATGATGATTTCGGTTGGATGAGGAGGGCATCCAAAGGCCTCGATAGGCACCTAATCGAGGATGGTCTTA GTAACACGATTCTCACCCTGCCACTATCCTGGCAACAGGAAATTTTGCTAGCTTGGTTTAATCGTTTCTTGAACTCCGGC GAAGATTGCCCAAATATTCAAAGAGGGTTTGAGGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACA GACAAGACAATTACGAATTACATCTGCATCAATTGAGAACCCTTGA
CDS sequence (LotjaGi4g1v0429200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTACACTCACTCTTCTCCGCTTTCCAACGGACATTCGGGTCCGGGTCAGGGTCATGACCCGTTTCCTTCCAGCTT CTCCAAGTTCAACAACGCCCTCACCGCTGGCCTCCTCAACCCAATGTCGCCGCCGCCGGATAAACCCCGCTCCAGCCCCA CCCTCTTTGAAATGATGGTTAGCGAACCGGATATCAATCATCACAGAAACCAGATCCCGCCGAGTAACAACAACATTGCC GCACCGCCGATGCAGAAACCGCAAATTCCGGTGATGGACCGGCAAACCCTGATGATGCAGCGGATATCGGAGTTGTTAGG TTCTCGGAGCCCCGGGAATCAGTTCAACGACCCGACTAACAGTGACATCAAGCTCACGCTCAGCTCCAAAGATGGGTTTA GCATCTCCATGAACGTGCATCGCCAGATTCTTGTTGCGCATAGCAGATTCTTCTCGGTGAAGCTCTCTGATCGCTGGACG CAGCAGCAGAACCGGTCGGCGTTGCCTTATCTTGTTGAGATTGCTGATTGTGATGATGTTGAGGTTTATGTTGAGACTTT GAGGTTGATGTACTGTAAGGATCTCAGGAAGAAGCTCATGAAGGATGATGTTTCCAGAGTTCTGGGTATCTTAAAGGTTT CAGCAGCAATTGGATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCCCCATGGGCTGAGGATGAAGAA GAAAAGGTGGCCTCGCTCCTGTCGGAGCTTCGTCTTGATTCTGTTGGAGCTGGAGAAGTTTTGAAAAGGGTTTCAATTGA AGTTACCCATGGAAATGAAGAGGGGAGTGATAATGAGGAAGTTCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGCAAAG ATGAGAAGGCTAGACGTGAAATGAAAGGGTTGGTGTCAAAGATGCTCCGTGAAAATTCTTCACAGAACGATCTTCGGAAG GAGTCTATATACTCGGCATGCGATGATTGTCTTCAGTTACTTCGTCTCCACTTCTTACAGGCTGCAGCTTCGGACATGCG GGATGTAAGTCAAATTGCAAGGCAAGCAGATAATTTGCATTGGATCTTGGATATTTTAATCGATAGACAGATTGCTGAAG ATTTCTTGAAAACATGGGCTTCTCAATCAGAATTATCGGAAGCGCATGCTAAAGTTCCTGCAGTTCATAGGTTTGAGATT AGCAGAGTTACAGCGAGATTGTTTGTTGGGATTGGGAAAGGACAGTTATTGGCTTCTAAAGATGCTAGGTGTTTACTTCT AAAAACATGGCTGGTTCCCTTTTATGATGATTTCGGTTGGATGAGGAGGGCATCCAAAGGCCTCGATAGGCACCTAATCG AGGATGGTCTTAGTAACACGATTCTCACCCTGCCACTATCCTGGCAACAGGAAATTTTGCTAGCTTGGTTTAATCGTTTC TTGAACTCCGGCGAAGATTGCCCAAATATTCAAAGAGGGTTTGAGGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGG AGAGCAAGAACAGACAAGACAATTACGAATTACATCTGCATCAATTGAGAACCCTTGA
Protein sequence (LotjaGi4g1v0429200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYTHSSPLSNGHSGPGQGHDPFPSSFSKFNNALTAGLLNPMSPPPDKPRSSPTLFEMMVSEPDINHHRNQIPPSNNNIA APPMQKPQIPVMDRQTLMMQRISELLGSRSPGNQFNDPTNSDIKLTLSSKDGFSISMNVHRQILVAHSRFFSVKLSDRWT QQQNRSALPYLVEIADCDDVEVYVETLRLMYCKDLRKKLMKDDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEE EKVASLLSELRLDSVGAGEVLKRVSIEVTHGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRK ESIYSACDDCLQLLRLHFLQAAASDMRDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSEAHAKVPAVHRFEI SRVTARLFVGIGKGQLLASKDARCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRF LNSGEDCPNIQRGFEVWWRRAFWKRNGEQEQTRQLRITSASIENP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 18 | 524 | 507 | 3.9E-291 | – | |
| PANTHER | 18 | 524 | 507 | 3.9E-291 | ||
| CDD | 99 | 192 | 94 | 5.02242E-8 | – | |
| SUPERFAMILY | 111 | 230 | 120 | 8.63E-5 | ||
| Gene3D | 114 | 232 | 119 | 1.0E-7 | – | |
| ProSiteProfiles | 121 | 199 | 79 | 11.233 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0429200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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