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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0429400 |
| Transcript ID | LotjaGi4g1v0429400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TAIR: AT4G23490.1 fringe-like protein (DUF604); Swiss-Prot: sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TrEMBL-Plants: tr|I1K6F3|I1K6F3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0429400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80355234..80359507) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACTCATTAGTCAGTCTACTACCACTTAGTACAATGGACGAAGAATAATCTGACAACTATTAATTGTCAAATACCT TATTAACACTGAAAAATATCTAATATGATGGTTTTATAGGTAATTAAACATACACTTATTACACTTATATAAATATAAAA ATGATATTGATGTGAATAAATGCAACTTTATAAATATATTTCCTACCGTCATTCAAGCCCAAATAAATACCTACTAGGTG GATCTCTACCCTACCCCAGAGAAATGTAAATATAAATAATTTTCTTTTCTGCATTCGGTTCTATTCTGGGGGGTGTGTAC TGTGAACTTGGGCTGGCACTGCTACCACCACCTCTTATGCTCACACACGCTTTCTCCTTCATCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTCTTCTGTTCTGTTCTGCTCTGCAACCAACCCCACCTTCTTCTGCTAGCACCACCTGTTTAAT TGATTCCACGAACTAACCCTCCTTCCTTTTTGTTTTTCCCACATTCATCTGTTTCTTCCACTTTCCACTTCTTCAAGATC TGCTTCTCTTTACTTTCACTCAATTGAAAATGAAAATGGCGGAGAAGGAAGCAGAGAAGCTAATTTGGGAACATGTCAGA AGCCCTAAATCTGCAACCACCGCCATTAATGGACCACAGTCACGAACCTTACACAAGCTTCTCTTCTTGCTAATCTTCTT CGTCTCCCTCACCTACGTCATCTACACGCTCAAACTCATCTCCACCTCACGCTCTTGCCACCACACCGAAACCCCTTTCC CCAACCACGCCCTCGCCTCCCGTGAAACCGAAACAGAAACGGTAACCCACCGCGCCGACACCCAAACGGAGCTCCGGCAC GTGGTGTTCGGGATCGCCGCGTCGGCCAAGCTATGGGACCAGAGGAAGAACTACATCAAGCTCTGGTACAGGAGGAGAGA GATGCGGGGCGTGGTGTGGCTGGACAACAAGGTGAAGACGCGGGAAGGCGACGGGATTCTCCCGCCGGTGAGGATCTCCG GCGACACGTCGAGATTCTCATACACGAACCGGCAGGGGCACCGGTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACG CTGCGCCTCGGGATGAAGGATGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTCACCGATAACCTTGTTAG GATTCTGAGGAAGTATGACCATACCCAATACTATTACATTGGGAGCTTATCGGAGTCTCACTTGCAGAACATCTTCTTCT CCTACGGCATGGCCTACGGCGGAGGAGGCTTCGCTATCAGCTACCCTTTGGCGAAAGCTCTCAGCAAAATGCAGGACCGT TGCATTCAGAGGTACCCGGGACTCTACGGCTCCGATGACAGAATGCAAGCTTGTATGGCCGAACTCGGTGTTCCACTCAC TAAAGAAACCGGTTTCCACCAGGTTCGTGCGTCACAAACTCGGTTGCTAACTCAGTTAGCAATAGTAGTACAGTACTGTA TTGATTGTTTGCAACCACCGTGCTTTTTTACTGTCTCTATCTTATCATGATACGCGGACCTCTTTGTTGGTTTGATTGAA TTTGCATTGTTTTGTTTTTTGTCGGCATTGTTCTGGTTCGGTGGGAGTGGGACACTGCTTTCTGATTTTCCATAACTTTT GGTTTTTTACTGTTTCCTAATAATTGCAATGCTAGCTGTTTCCTTTTTGTGACTGGAGTGAATGGAAGATTGAAGAACTG TGTTTAGAGTTAGACCCTGATGAAATTGGATAAAGAGAAGTAATTGTATTACACAGATTGGTAGAAAGAGTGTAAAATGA GGGTGAAAAACTGTGTGTGAGAAAAATCCAATACTAGAAAGTCTTTGATGTCACTAAATTACCATTGCTGAGGCTGCAAG TTTCTATTTTAACTTGTTGGTAACTTGGTCCCAGATAGTACTGTCGGTGTCGGTGTTGTCCTATTGCATTAATATCTTTT TCTGGTTTGGCTTTCTTAGTTGAATCTGACTTCTGCATTCAATTTCTGGGTCGTGGAATTTAATTATTTGCTTTGGCTTG CGGCTGTTTGAAGACTCCTGATATATATTTTTTTATTGGAGAAATTAGGCTCAGCTCAGAGTACAATCATTGGCATTTTA GATATTGACCCTGTATTGTAAACCATTTGTGCTGTTGGGTGGTTCAAAGACCAAAGTTGTTAAGGCAAATTAGGCAACAA TGCAACATGACAAGGGCTTTTACTTTTTCTCTGTGACTTCATATTGTAATGTGAAGTGCAGAGGCACTGTTATAAATGGT CATAGGAGATTTTTATGGGTTTGTAGATGAGAATGTGAGTCAAGAACTCATGTTAAGAAATAAGACAATTTCCAGTTACT TGAAGGGAATATTAATTAGTTTTAAAATTTTCAAAATGCTAAATGTTTTCACCATTCATAACAAAGATGCATTCCATTTT GTTGAACAAAGCAGTAAAGTCATGCAAAGTGTTTTAGGCAAGGGATATAGTCCTGTCTTGCATTCTATTCTGTTAACTTT CATACTGAGAGTCCCTGGTTTATTGAAACAGTATGATGTGTATGGGAACCTGTTCGGTCTTCTTGCAGCTCATCCTGTGA CTCCATTGGTGTCATTACACCACCTTGATGTGGTTGAGCCAATCTTCCCCAACGTGACTAGGGTGCAAGCTCTTCAACGC CTTACTATACCGATGAAGCTTGACTCTGCCGGGCTAATGCAACAATCAATCTGCTACGACAGATCGAAAAGCTGGACGGT TTCCGTTTCATGGGGTTTTGCTGTTCAGATATTTCGGGGCATATTTTCACCCCGGGAGATGGAAATGCCTTCTAGAACAT TTTTGAACTGGTATAAAAGGGCAGATTACACTGCTTATGCATTTAACACGCGGCCAGTTAGCAGAAATCCATGCCAGAAG CCTTTTGTATTTTATTTCTCCAAGGCACAACAGAATTCCACACTGCAGCAGACAGTGACTGAGTATGATAGGCATCGTGT CCCTCACCCGGAATGCCGGTGGAAGATGGCTGATCCTTCTTCTCTTGAGAAAGTCACAGTATATAAGAAGCCAGATCCAC ATCTTTGGGAAAGAGTAAGTTCTAGTCTCAGTCTCCTAAGTTTATATTATACTACCAACATGTGAGGATGTTAATAACAT GTCTACCCTAGAATTTATAGCATGTTTGAATCAACTTCTTTTTCTCATAATTAATTATGACACCAGAAGCTACATAAGTT TCTCTCCTGAATTGATTTTGACTTCAGAATCAATTGTAGATGGATTTTCAAACACGGACGTAGGCTAGTAATGTCAAAAG TGAACATGTAGGATTGGCTTGCTACTCACCTGCTAAACTGTTTTGAGCGTTTCTTATATGAATATCATGTTTTAAACTTT GTAAAATTCACTTGTTTGGTGGCACACTGTCATCCTTTGTTTGGACATTGATTTGGGTTTCCTTTGATGCATGTATTTGG CAGGCCCCGAGGAGAAACTGTTGCAGAGTGAGGAAATCAACGACGAAGAAAGGAACCATGGTTATAGATGTGGGTGAGTG TAGGGAAGATGAGTTAAGCGAAGCATAGGGTATGTTGGTTTTAACATCCAACCATATTCAACTCCAACCCTTCAAAAAAA TTGCTTTCACATTTTGGCGAGATCCCACTTTCCAAGGCAAAATCAATGTGCTTTCACTCTAAACCAAACATGCTCTAAAG TAGTGATATGTCACTGATAAATTATATTAAGGAGGAGGATTCATGAACATATTTCATTATTTGTTGGATGGCTCCCTCAC TCACACTCACGTTGTGAGATTTTGCAATTTTTCCTCGGAGTTTACTGAGGTGGAGTGAGAGTTGGGGAAATGTCTGTGTA CAAAAAGAATTGTAGTTTAAGCAAAATGTGGATGGGAAGGGGAAGGAGGGAGAATTTTGATTTGTAAGTTACTATTGCTG AAGGGAATCTTTAATTCGTGATTTAATGCACCTGCCTACTATTTCCACATACTTTAATTATCATGCCTTCTTCTACCAAA CTAATCTGTCAAAGTTATATGTGTTACTAACTTGTTATAACAGCATTCTGTGTTTACCAATGTGAGTGTAAGTGTATTAA AATCCTATTACTACATGTTTGGATCTGTGTTAGCAAATGACCGTAGGAAGCTACGTGAATCTTCTCATGTTTTTATAAGG AAAAGAAGTACTGTACTACCAATTAGGTTTTGAC
CDS sequence (LotjaGi4g1v0429400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGGCGGAGAAGGAAGCAGAGAAGCTAATTTGGGAACATGTCAGAAGCCCTAAATCTGCAACCACCGCCATTAA TGGACCACAGTCACGAACCTTACACAAGCTTCTCTTCTTGCTAATCTTCTTCGTCTCCCTCACCTACGTCATCTACACGC TCAAACTCATCTCCACCTCACGCTCTTGCCACCACACCGAAACCCCTTTCCCCAACCACGCCCTCGCCTCCCGTGAAACC GAAACAGAAACGGTAACCCACCGCGCCGACACCCAAACGGAGCTCCGGCACGTGGTGTTCGGGATCGCCGCGTCGGCCAA GCTATGGGACCAGAGGAAGAACTACATCAAGCTCTGGTACAGGAGGAGAGAGATGCGGGGCGTGGTGTGGCTGGACAACA AGGTGAAGACGCGGGAAGGCGACGGGATTCTCCCGCCGGTGAGGATCTCCGGCGACACGTCGAGATTCTCATACACGAAC CGGCAGGGGCACCGGTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACGCTGCGCCTCGGGATGAAGGATGTGCGGTG GTTCGTGATGGGCGACGACGACACCGTTTTCGTCACCGATAACCTTGTTAGGATTCTGAGGAAGTATGACCATACCCAAT ACTATTACATTGGGAGCTTATCGGAGTCTCACTTGCAGAACATCTTCTTCTCCTACGGCATGGCCTACGGCGGAGGAGGC TTCGCTATCAGCTACCCTTTGGCGAAAGCTCTCAGCAAAATGCAGGACCGTTGCATTCAGAGGTACCCGGGACTCTACGG CTCCGATGACAGAATGCAAGCTTGTATGGCCGAACTCGGTGTTCCACTCACTAAAGAAACCGGTTTCCACCAGTATGATG TGTATGGGAACCTGTTCGGTCTTCTTGCAGCTCATCCTGTGACTCCATTGGTGTCATTACACCACCTTGATGTGGTTGAG CCAATCTTCCCCAACGTGACTAGGGTGCAAGCTCTTCAACGCCTTACTATACCGATGAAGCTTGACTCTGCCGGGCTAAT GCAACAATCAATCTGCTACGACAGATCGAAAAGCTGGACGGTTTCCGTTTCATGGGGTTTTGCTGTTCAGATATTTCGGG GCATATTTTCACCCCGGGAGATGGAAATGCCTTCTAGAACATTTTTGAACTGGTATAAAAGGGCAGATTACACTGCTTAT GCATTTAACACGCGGCCAGTTAGCAGAAATCCATGCCAGAAGCCTTTTGTATTTTATTTCTCCAAGGCACAACAGAATTC CACACTGCAGCAGACAGTGACTGAGTATGATAGGCATCGTGTCCCTCACCCGGAATGCCGGTGGAAGATGGCTGATCCTT CTTCTCTTGAGAAAGTCACAGTATATAAGAAGCCAGATCCACATCTTTGGGAAAGAGCCCCGAGGAGAAACTGTTGCAGA GTGAGGAAATCAACGACGAAGAAAGGAACCATGGTTATAGATGTGGGTGAGTGTAGGGAAGATGAGTTAAGCGAAGCATA G
Protein sequence (LotjaGi4g1v0429400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMAEKEAEKLIWEHVRSPKSATTAINGPQSRTLHKLLFLLIFFVSLTYVIYTLKLISTSRSCHHTETPFPNHALASRET ETETVTHRADTQTELRHVVFGIAASAKLWDQRKNYIKLWYRRREMRGVVWLDNKVKTREGDGILPPVRISGDTSRFSYTN RQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTDNLVRILRKYDHTQYYYIGSLSESHLQNIFFSYGMAYGGGG FAISYPLAKALSKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVE PIFPNVTRVQALQRLTIPMKLDSAGLMQQSICYDRSKSWTVSVSWGFAVQIFRGIFSPREMEMPSRTFLNWYKRADYTAY AFNTRPVSRNPCQKPFVFYFSKAQQNSTLQQTVTEYDRHRVPHPECRWKMADPSSLEKVTVYKKPDPHLWERAPRRNCCR VRKSTTKKGTMVIDVGECREDELSEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 27 | 505 | 479 | 4.8E-281 | – | |
| PANTHER | 27 | 505 | 479 | 4.8E-281 | – | |
| Phobius | 37 | 54 | 18 | - | – | |
| TMHMM | 37 | 54 | 18 | - | – | |
| Phobius | 55 | 506 | 452 | - | – | |
| Gene3D | 85 | 298 | 214 | 2.5E-11 | – | |
| Pfam | 226 | 479 | 254 | 2.8E-119 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0429400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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