Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0435800 |
| Transcript ID | LotjaGi4g1v0435800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-glucose 4-epimerase family protein; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr|A0A1J7FZR9|A0A1J7FZR9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80894976..80898788) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCACAAAACGTCCTGGCGCGTAACAAACTCTCATTTTTTCTATAAAACCTTCTCTTCCGATACAGAGCTATCGTAAC CGTTTTTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTCAATCAATTATGGCAACCCAAACCGTTCTCG TTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTCCAGCTTCTGCTCGGCGGTTTCAACGCCGTCGTCGTTGAT AACCTCGACAATTCCTCCGAAGCCGCTATCCATAGAGTCAAGGACCTCGCCGGAGAATTCGCCGGTAACCTTTCCTTTCA CAAGGTACACGGCGCATTCTCTCGTTGTTCCACCGTTTTCGATTATAACTCAATTTTGATTGGTTGTTACTTGTTCGGTC CTCGTGATTTCATTATTATTATTATAATTTTGCTTAGGGATGATCGTAATCGTAATTTGTTTCTAATTAGTTTTTTGACA GTTTTTTTGGGATTTATTTAATTAACAAATGTTTTAATTTATTTATTTATTTATTCATGGTGCTTTGAGAGTTTCTATTT TTTCATGCTGAATTCTTTGTGGTGGGCCCAACCAACAGGTAAAATTCACAAAAGCAAAAGTTTTGTGTGCTTTATTCCTT GAAATTAAAGGTCGGTCATAGTTTTGAATTGTGTGTTTTCATAATGATTTAGTGTGTGTTTTGAAATATAAGCGCACAAA AGCAACTTCCATTAGCTTTTAGGGTTATCTGTCGTGATTTTCGCGTCACCGTGTACACAAACATGCTTTTAGAATGTTTC ACAAATGGCCTGACAAGTTCAAATGCACTTTTAGATGTGATGTGAGTTTAGTTGATTCTGTTATTGAATCCAATGTTGCT CTTTTAGGTTATGATTATGTTAGGTATGCTTTCAGTTATCAGTATTAAGTATTAGACCCAAAGAAAGTAATCAGTGTTAG TATTAGACCTCATTTTATTATTATTATGCTGAACTGATTGTTTTCATTGTATATTTTCCCTCTACAGTTGGACCTCCGTG ACAGAGATGCACTGGAGAAGGTTTTTGCTTCTACAAAGTATGGATTTGTGCTGAAGTTTCTGTAATTTTAATAAGGATTG CGCTTTTGCCTGCCTTTCGCTTTCCCTTGTAGTTTTATTTGAGCCCTGATATTGCAAGTTTTAACTGTTTCTTATATCTG TATCTTTTTGTCCAGGTTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTGCAGAAACCGCTGC TTTACTATGACAACAACTTGATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGGTAATAACT GGTCATGTACATTTAGTAGCCATTAGCCCATTAATTTGCATTGTACAATTGTTTGTTGAGACAATTCAGCAGAAACTTCA TGTTTAGATGGATGGAATTGAGTTATTTCTTCTTCTAGTACCTTCATGGGTTACAAATAGTTTTGTCTTGATGCTGCAAT CTGGTTTAACACTGCTATATTTCTTGTATGATTTCAGCTTGTGTTCTCATCTTCGGCCACTGTATATGGATGGCCTAAGG AGGTCCCGTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGGTATGATAGGAAACTATTAAC AGTACTTGTTAAAACTTGGATAGTATAACTGTAGCTGATGGCAGCTTGGAAAAAAATCAGTCTTGATTTTAATTTCATAT TTTGGGCAATTAGCTAGGAACTTGGAATTGGGATTGTGGTCCTGTACAAAACACCTTTATCATTTGTTAAACAACAATGA TATTTCCACTTTCAGTGTATCATTACTTTTTTCTTGAGCTAGGAGAAAAAAAAAAAGAAAACGTGGTTTTAACATATTTC AAGGAGGTCGAATGGTGTGGAAATGTCATGGTTGTTTGTAAATCATTACTAATTGCAATATTTCTCTTCGATTCTAGCAG TGATATCTAATGAGAGTTCTGTCTTACAGCTTATCATCGAGGAAATTTGTCGGGATATCTACCGTGCAGAAGAGGAATGG AAAATTATACTGCTGAGATACTTTAATCCTGTTGGTGCACATCCTAGTGGTAATATTGGCGAGGATCCTCGTGGAATTCC AAACAACCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGTCCTGCATTGACAGTTTTTGGAACAGATTATAGTA CAAGTGATGGCACTGGAGTATGTTATCTTTTTTTCTTTTTTATGTTTTAGTGAACATTTTTCCTTGAAAAATTGCAACAA AGCTCACACTGCCTCACGCCCTATCTACATAAGCCCCCACTTCCCCTCATTGGAACCATCTATTTCAATTTCTTAAGATC TACCTTTGATTTATTCTGTGATCTGACAGGATAGACCTTATCTTTTTCTCAGGTTCGCGATTACATTCATGTTGTTGATT TAGCAGATGGGCACATAGCTGCATTGCATAAACTAGATGATCCTAAAATAGGTACTATTCCAAATTCATCACTGTCTTCT AATAATTTATTCAGTGTGTTTGTTTTAGTAAGCTCTGGCAGTAGCCAATGGTTTTGACTTTTGAACTGATGTTTAATTAC TACAAGTAATTGTTAATTTTTCTGTTTGTTCTTTTCTCAGATTTTCTTTAATGTTATGTTGTTTTGGTAAAATCTCATTC TGGGCTTGTACAGGCTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAAAGCTTTTGA ACAGGCCTCTGGAAAGGTAACTAATTGATGATTCTATTCCTGGTTTTATATTTGTGTTGCCATCGTATGCAGTCAATTTG TGCCATTCTTTCTTTTTCTTCCTTAGATTTTGAATTTGACAGGGTAACCATTCATGTGAGACATACTTAGTCTTTTAAGT ATCATTTTATTGTATATTATGATTTAAGCTTTCTTTACCAGATGACTAACAATTTTTTAATGTTCAGAAAATTCCACTTG TAACGGCTGATCGGAGACCTGGAGATGCTGAAATTGTTTATGCATCAACTGAAAAAGCAGAAAGAGAACTGAACTGGAAG TAAGTGTTACTTTGCTTTGCTATCAAGTGAATTATTAAGTGGCATCTATATTACTCATTTTCCACCTTTTGACTCACAAA TTTATCTTCTTTGTAGGGCTAAATATGGAATCGATGAAATGTGTCGTGATCAATGGAACTGGGCTAGCAAAAACCCTTAT GGCTATGGAGGATCTGAAGATTCTTCTAATTAACGTTGATAATTGCTAATCTTAGTACAAGTTCTCTTCTTGGTCTTTTT AGGAACCCTGTTACACCATAGGCCACTACAAATATAGTTTTCCTTGAAACTTTTCTTTAGCTATTCTAAGGTGGAGATAA ATTTTGTAATTATGAATTCTAATAACGTCTTAAATAAGTAGTGGTTTACTTTAATTTTATTGTTCTTTAGGTTCCGGCTT ACTGGCAATTAAATGAGGATCCTCTCATGTTCTTCAAGATCATGACTGCATCCTGTTTTGTAATCTTAAATCACACAATT TAGAATATGATTAATGGTTATAATATTACATTGTTATACTTCCTTCGATTTTCTCTTTATTTTAATTCTAGCCTACTTTT GAATGATGAAGCCAAAATCTTTAACCACATGGCAACATGTTGCTCATGGCTTCCTTCAACTGATAGATACCCTGCACAAG ACGTAGGACTCAGTAGGAGTATAACCAGCGGCCATTTGTCATCATCACTTTTA
CDS sequence (LotjaGi4g1v0435800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCCAAACCGTTCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTCCAGCTTCTGCTCGGCGG TTTCAACGCCGTCGTCGTTGATAACCTCGACAATTCCTCCGAAGCCGCTATCCATAGAGTCAAGGACCTCGCCGGAGAAT TCGCCGGTAACCTTTCCTTTCACAAGTTGGACCTCCGTGACAGAGATGCACTGGAGAAGGTTTTTGCTTCTACAAAGTTT GATGCTGTCATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTGCAGAAACCGCTGCTTTACTATGACAACAACTT GATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCGGCCACTGTAT ATGGATGGCCTAAGGAGGTCCCGTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGCTTATC ATCGAGGAAATTTGTCGGGATATCTACCGTGCAGAAGAGGAATGGAAAATTATACTGCTGAGATACTTTAATCCTGTTGG TGCACATCCTAGTGGTAATATTGGCGAGGATCCTCGTGGAATTCCAAACAACCTCATGCCATTTGTTCAGCAAGTAGCAG TTGGCAGACGTCCTGCATTGACAGTTTTTGGAACAGATTATAGTACAAGTGATGGCACTGGAGTTCGCGATTACATTCAT GTTGTTGATTTAGCAGATGGGCACATAGCTGCATTGCATAAACTAGATGATCCTAAAATAGGCTGTGAGGTTTATAACTT GGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGAAAATTCCACTTGTAA CGGCTGATCGGAGACCTGGAGATGCTGAAATTGTTTATGCATCAACTGAAAAAGCAGAAAGAGAACTGAACTGGAAGGCT AAATATGGAATCGATGAAATGTGTCGTGATCAATGGAACTGGGCTAGCAAAAACCCTTATGGCTATGGAGGATCTGAAGA TTCTTCTAATTAA
Protein sequence (LotjaGi4g1v0435800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATQTVLVTGGAGYIGSHTVLQLLLGGFNAVVVDNLDNSSEAAIHRVKDLAGEFAGNLSFHKLDLRDRDALEKVFASTKF DAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLI IEEICRDIYRAEEEWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTSDGTGVRDYIH VVDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLVTADRRPGDAEIVYASTEKAERELNWKA KYGIDEMCRDQWNWASKNPYGYGGSEDSSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 350 | 350 | 3.0E-229 | – | |
| PANTHER | 1 | 350 | 350 | 3.0E-229 | – | |
| SUPERFAMILY | 1 | 341 | 341 | 1.15E-98 | ||
| CDD | 5 | 334 | 330 | 0.0 | ||
| Gene3D | 6 | 280 | 275 | 1.5E-146 | – | |
| TIGRFAM | 6 | 340 | 335 | 4.3E-132 | ||
| Pfam | 7 | 330 | 324 | 2.1E-67 | ||
| Gene3D | 199 | 335 | 137 | 1.5E-146 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | UDP-glucose 4-epimerase activity | Catalysis of the reaction: UDP-glucose = UDP-galactose. | ||
| Biological process | Galactose metabolic process | The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose. |
Expression pattern of LotjaGi4g1v0435800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…