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LotjaGi4g1v0438700.2

Overview

Field Value
Gene ID LotjaGi4g1v0438700
Transcript ID LotjaGi4g1v0438700.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT4G31170.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|V7CTI9|V7CTI9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0438700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81179714..81182536) extracted from Lotus japonicus Gifu genome v1.2.

ATGTTGGACGGGGGTGCGAAGTTCCCGGGAATAATAGATCTCAACAAACATGACAACAACTTTTATGATTTCTCGCAAGG CTTTTACCATAAGCTTGGGGAGGGGACCAACATGTCAATTGACAGCGTTGGGAGCTTGCAAACAAGTAATGGTGGAGGAT CTGTTGCGATGTCTATTGATAATAGCAGTGTTGGTTCCAATGATTCCCATACTCGCATTTTGGAGCACCCAGGGCTGCGG AGGCGTGCTAATGATAACTACTCTGTTGCACATAGTGCCAATCGTCGGGGAAGAGTCACACATGCTTTGAGCGATGATGC CTTGGCTCAAGCTCTAATGGACAATAGCTCTCCGACTGAGGGGCTTGAAAATTTTGATGAGTGGACAATTGATTTAAGGA AGCTTAATATGGGTGAGGCTTTTGCCCAAGGAGCTTTTGGGAAACTCTACAGAGGCACTTACAATGGTGAAGATGTTGCT ATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAGCAACAGTTTCAGCAGGAGGTCATGAT GCTGGCTACGCTAAAGCACCCTAACATAGTTCGTTTCATAGGTGCATGCCGTAAGCCAATGGTGTGGTGCATTGTGACAG AATATGCTAAAGGTGGTTCAGTTCGACAGTTTTTGACAAAGCGCCAAAACCGATCAGTTCCCCTCAAACTGGCTGTCAAG CAAGCCTTGGATGTTGCAAGAGGGATGGCATATGTTCATGGCCTTGGATTGATCCACAGGGACTTGAAATCTGATAATCT TTTGATTTTTGGTGACAAGTCAATTAAGATTGCTGACTTTGGAGTAGCTCGGATTGAGGTGCAAACTGAAGGGATGACAC CTGAGACTGGAACATACCGTTGGATGGCCCCGTAAGATTATTTTGCCTTCTTTTTTCCATTTTAACATGCACTCCGGCTT CATGTTTCTGAAATTATGTTCTGGTCAAGTTATTTGTCATTCCCTCACATTAATTTATTTTAATCACATTCTCACACTTA TCATTATTTTGTGCATCAAACAAGTGAAGGAAAAACTCTTTGTCTCTCTTTTGTTTTGACTGGAAGGATAAGGGAACATG TACTCTGCATTGGACTAACACTACAGTAAAAATAATTGCAGTCAAGTATTCAAAGTGAAGTTTGGGCTTTGTTGTTTATT ATATAAGCAAGTTCTGATGATAATCCTAGTTTCTTAGATTTGCCATCAATGGAAGTTACTGTCAACATGGCATTTCAAAA ATGCTGATCTTGTTTTTGGATCCTGCTATTGTTTTTAGAATTTATTGATTGTTTTTCTTTTCACTTGTACACACATTCAT GGCTGTGGTCTTATGAGTACTTCTGTCATCAATAATTTTCTTATCTATTTTCTGTTTTGTTTTTGCTCCCCTAGCTCATC CCACTTCTTGCTTGGGAAATAGCTTCCATACTCCACAATCGGTTAAATAGCCTTGTACACACATTCATGGCTGTGGTCTA ATGAGTACTTCTAAACAACAGTGTCATCAATAATTTTCTTATCTATTTTCTGTTTTGTTTTTGCTCCCCTAGCTCATCCC ACTTCTTGCTTGGGAAATAGCTTCCATACTCCACAATCGGTCAAATAGCCTGAGCTTAAAGTTTGACTGGGTTAATGTGT GAATCTTGTGAGAAAGTTACTCTTTCTCAGTGACTTGTTATGTATGTGTAGATAGCTAGAACTACTGTCATGTGGAATTT TTTGCCGTGAAGTTACTCTGTCGTGTTCAGAGGATCATTAAGCAAGCGGTTTTTAGCTAACTATTAGCTTTGGTTATCCT AGAGCAACTCTTAAAACCTGTTGTTCACTCATTACTGATCAATAAGTCCAATTTGAATATTGGCACAATTTGTTGATCTA AGCTGCACAGACACAATTATTGAGTATCTATGCTGATACAGATAGAGTCTCTAGGTCTAGGATATCAGTTCACAGAGATA TATCATACAGTAGTAAAAAAATATTGGTTATAAAAGAAGGCACAAGTTAAATGTATTGTTCATAATCTACCACTTAGTTG ATAAGTAACAGTTTATTTCATTTAGTAACAAATCAACCACTTAGTTGATAAGTGAGCATTGAGTACGTATTCATATGTAT CCAATAAATATTGGTATCGCTGTACTGGATACTTACCTTGTATGGGTACAACAACAATTTAGCAATACCGTGCAATATAT TCAGTAATTCAAACTTGTAATAAGATTCATCCATCAGTGTGTTTCTGATACTAATCTAATCATGTCACTCAGAGCCAGCA TGTCATGTTTCCACTGAGATCGAGTTGATGATATTTCATGTATTTTTTTGGTTTGGCTAATATGATCCAAATGTTGAAAT GCATACTTGGTTTTAACTGTTTTATTTATTTTTTAGTTATTCCTATGCGATATTAACATATGTGGTTTACTGATCTGCTG CAGGGAGATGATCCAACATAGGCCTTACACACAAAAAGTGGATGTATATAGCTTTGGGATTGTTCTGTGGGAACTCATCA CAGGTATGCTTCCATTTCAGAACATGACAGCCGTACAGGCAGCATTTGCAGTTGTCAACAGAAATGTTCGCCCAATCTTA CCCAATGAGTGCTTACCTGTTCTCCGGGAGATCATGACAAGATGCTGGGATCCCAACCCTGATGTTAGGCCCCCATTCGT TGAAATTGTTGGAATGCTTGAGAATGCAGAAATGGAGATCATGACAACAGTTCGGAAGGCCCGGTTCAGGTGTTGCATGA CTCATCCAATGACTGCTGACTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0438700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGGACGGGGGTGCGAAGTTCCCGGGAATAATAGATCTCAACAAACATGACAACAACTTTTATGATTTCTCGCAAGG CTTTTACCATAAGCTTGGGGAGGGGACCAACATGTCAATTGACAGCGTTGGGAGCTTGCAAACAAGTAATGGTGGAGGAT CTGTTGCGATGTCTATTGATAATAGCAGTGTTGGTTCCAATGATTCCCATACTCGCATTTTGGAGCACCCAGGGCTGCGG AGGCGTGCTAATGATAACTACTCTGTTGCACATAGTGCCAATCGTCGGGGAAGAGTCACACATGCTTTGAGCGATGATGC CTTGGCTCAAGCTCTAATGGACAATAGCTCTCCGACTGAGGGGCTTGAAAATTTTGATGAGTGGACAATTGATTTAAGGA AGCTTAATATGGGTGAGGCTTTTGCCCAAGGAGCTTTTGGGAAACTCTACAGAGGCACTTACAATGGTGAAGATGTTGCT ATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGGAGCAACAGTTTCAGCAGGAGGTCATGAT GCTGGCTACGCTAAAGCACCCTAACATAGTTCGTTTCATAGGTGCATGCCGTAAGCCAATGGTGTGGTGCATTGTGACAG AATATGCTAAAGGTGGTTCAGTTCGACAGTTTTTGACAAAGCGCCAAAACCGATCAGTTCCCCTCAAACTGGCTGTCAAG CAAGCCTTGGATGTTGCAAGAGGGATGGCATATGTTCATGGCCTTGGATTGATCCACAGGGACTTGAAATCTGATAATCT TTTGATTTTTGGTGACAAGTCAATTAAGATTGCTGACTTTGGAGTAGCTCGGATTGAGGTGCAAACTGAAGGGATGACAC CTGAGACTGGAACATACCGTTGGATGGCCCCGGAGATGATCCAACATAGGCCTTACACACAAAAAGTGGATATGACAGCC GTACAGGCAGCATTTGCAGTTGTCAACAGAAATGTTCGCCCAATCTTACCCAATGAGTGCTTACCTGTTCTCCGGGAGAT CATGACAAGATGCTGGGATCCCAACCCTGATGTTAGGCCCCCATTCGTTGAAATTGTTGGAATGCTTGAGAATGCAGAAA TGGAGATCATGACAACAGTTCGGAAGGCCCGGTTCAGGTGTTGCATGACTCATCCAATGACTGCTGACTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0438700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLDGGAKFPGIIDLNKHDNNFYDFSQGFYHKLGEGTNMSIDSVGSLQTSNGGGSVAMSIDNSSVGSNDSHTRILEHPGLR RRANDNYSVAHSANRRGRVTHALSDDALAQALMDNSSPTEGLENFDEWTIDLRKLNMGEAFAQGAFGKLYRGTYNGEDVA IKILERPENDPAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK QALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDMTA VQAAFAVVNRNVRPILPNECLPVLREIMTRCWDPNPDVRPPFVEIVGMLENAEMEIMTTVRKARFRCCMTHPMTAD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257:SF790
30 391 362 2.3E-190 –
PANTHER
PTHR23257
30 391 362 2.3E-190 –
SUPERFAMILY
SSF56112
122 370 249 4.45E-64
IPR011009
Gene3D
G3DSA:3.30.200.20
124 217 94 1.3E-27 –
ProSiteProfiles
PS50011
135 396 262 34.11
IPR000719
SMART
SM00220
135 377 243 1.4E-35
IPR000719
CDD
cd13999
142 369 228 6.79445E-107 –
Pfam
PF00069
143 321 179 2.8E-44
IPR000719
Gene3D
G3DSA:1.10.510.10
218 386 169 3.3E-37 –
ProSitePatterns
PS00108
257 269 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0438700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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