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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0444700 |
| Transcript ID | LotjaGi4g1v0444700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT4G29140.1 MATE efflux family protein; Swiss-Prot: sp|Q9SZE2|DTX51_ARATH Protein DETOXIFICATION 51; TrEMBL-Plants: tr|I1K5Z5|I1K5Z5_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi4g1v0444700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81765623..81767782) extracted from Lotus japonicus Gifu genome v1.2.
CAAGAGTCCTCTCCCTCGTTCTCCTCACTCAGAAACTGTAATTAGTTTCTTCGTGTACCTATTTACTCACTCACTCACTA CTATTTGAGTTTGGTTTTTAGTCACTTTGGCTCTGTCCCTCCCATTTTGAAAACCCAAGAGAGATAGAAAAGCCACATTA CCCAAAAAACACACAGAGTGCTCTTTACGAGAGTATCTCTTCAGTCTTCACACCTCACTCTCTCCCTGCCACTTTCTCTC CTCCAAGAACCACACCACCACCATTAACATTTCCATCATCTCATTCATTCACTATCCATAACACATACACCAACATGTGC ATATCAAAAACAGAGGACTTAAGGTTTCTGTCTGGCACTGAAAAGACATGTTCATCTTCATGTTCAGCCATTGTGTCAGA GGTGAAATCCCTCATGGTGCTAGCTTTCCCTATAGCACTAACCGCTCTCATTTATTACTCCCGCTCCATCGTCTCCGTCC TCTTCCTCGGCCACCTCGGTGACCTCGAACTCGCCGCCGGCTCCCTCGCCATGGCCTTTGCCAACATCACCGGCTACTCA GTCCTCTCCGGCCTCTCCCTCGGCATGGAACCCCTCTGCTCTCAAGCCTTCGGAGCAAATCGCCCCAAGCTTCTCTCATT GACCCTGCATCGCTGCGTTCTGTTCCTGTTAGCATGCTCTGTTCCCATCTCGTTCCTCTGGCTCAACATGAAAAAGATAA TGTTCTTACTGCACCAGCAACCTCAAATCATAACAATGGCACAAACTTACCTCATTTTCTCCCTCCCTGACCTCATCACA AACTCGTTCCTCCACCCAATTCGCATTTACCTCCGATCACAGGGCATCACCCGACCCGTCACAATAGCATCCCTCGCCGC CACTCTTCTGCATTTCCCCTTCAACTACCTCCTCGTGACCCGGCGAGGCTTCGGAGTCGCCGGCGTCGCCGCCGCATCCG CCGCCTCAAACTTCTCCGTCGTCCTCTTCCTCTTCGTGTACATGCAAGTCACCGAGAACAACCTTACCTATTGGAGCAGG GACTGCCTCTCCGGCTGGAAGCCACTGCTCCGCCTCGCCGCGCCGAGCTGCGTCTCTGTTTGCTTAGAATGGTGGTGGTA CGAGATCATGATCGTGTTCTCCGGCCTCCTGGTGGACCCCACCGCAACCGTCGCTTCCATGGGGATCCTCATCCAAACCA CCTCGTTCATCTACGTCTTCCCTTCCTCTCTCGGGTTCGCAGTCTCAACCCGGGTCGGGAACGAGCTCGGGGCGAACCGG CCTTTTAAAGCCAAGCTCTCCGCCGTCGTTGCCGTTTTTTTCGCCGTCCTCATGGGCTTCTCGGCGCTGGTGTTCGCCGC CGGGATGAGACACCTCTGGGGGAAAATGTTTACCGCCGACGAGGATATCTTACAGCTGACGGCGGCGGCACTGCCGATTC TGGGGCTGTGCGAGCTCGGGAACTGCCCGCAGACGGTGGGGTGCGGGGTGGTTAGGGGGACGGCGCGGCCGAGCGTGGCG GCGAACGTGAACCTGAGCGCGTTTTATCTGGTGGGGATGCCGGTGGCGGTTGGTCTTGGGTTTTGGCTCGGTGTTGGGTT TCGTGGGCTTTGGTTGGGCCTGCTTTCGGCCCAGGTATGCTGCGCGGGGCTGATGTTGTATGTGATAGGGACCACTGATT GGGAGTGTGAAGCCCAGCGGGCCCAGCTGCTGACATTGGTTGATTACACGGATGATGATGAATCGGACGGTGTTGATTAC AGAAAGATCGACGACGTGGAAAAACTGCCGTTGACCGATATTCTTACGGTGAATTGATCCTCATGCTGCTGATAGTGTAA TGTGTTTTTTGTTTTGTAATTTTCCAAAGAAAAAAGAAAGAAGGAAGTGAATTGCGAGTATTTTTTCCAACTCTTTTTGT TTTTGAACTAGATAAATATACAGAAAATTTCAATTGTGAATTTGATCATTCTACCTTTTTCATCATAATCCTATACACAG TTGTTACGAATCTCATGCTTATAAGTTACAAATGGTGTATGTGGTGTAGACATTAAACAAGACCTTCTTTTAATTATGGG ATGGGAAATTGTGTCCATAAGGGCAGAAGGAAGTACATATATGATCGATGTTGGTTGACATGTCCTTGAGAAATGAGAGA
CDS sequence (LotjaGi4g1v0444700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCATATCAAAAACAGAGGACTTAAGGTTTCTGTCTGGCACTGAAAAGACATGTTCATCTTCATGTTCAGCCATTGT GTCAGAGGTGAAATCCCTCATGGTGCTAGCTTTCCCTATAGCACTAACCGCTCTCATTTATTACTCCCGCTCCATCGTCT CCGTCCTCTTCCTCGGCCACCTCGGTGACCTCGAACTCGCCGCCGGCTCCCTCGCCATGGCCTTTGCCAACATCACCGGC TACTCAGTCCTCTCCGGCCTCTCCCTCGGCATGGAACCCCTCTGCTCTCAAGCCTTCGGAGCAAATCGCCCCAAGCTTCT CTCATTGACCCTGCATCGCTGCGTTCTGTTCCTGTTAGCATGCTCTGTTCCCATCTCGTTCCTCTGGCTCAACATGAAAA AGATAATGTTCTTACTGCACCAGCAACCTCAAATCATAACAATGGCACAAACTTACCTCATTTTCTCCCTCCCTGACCTC ATCACAAACTCGTTCCTCCACCCAATTCGCATTTACCTCCGATCACAGGGCATCACCCGACCCGTCACAATAGCATCCCT CGCCGCCACTCTTCTGCATTTCCCCTTCAACTACCTCCTCGTGACCCGGCGAGGCTTCGGAGTCGCCGGCGTCGCCGCCG CATCCGCCGCCTCAAACTTCTCCGTCGTCCTCTTCCTCTTCGTGTACATGCAAGTCACCGAGAACAACCTTACCTATTGG AGCAGGGACTGCCTCTCCGGCTGGAAGCCACTGCTCCGCCTCGCCGCGCCGAGCTGCGTCTCTGTTTGCTTAGAATGGTG GTGGTACGAGATCATGATCGTGTTCTCCGGCCTCCTGGTGGACCCCACCGCAACCGTCGCTTCCATGGGGATCCTCATCC AAACCACCTCGTTCATCTACGTCTTCCCTTCCTCTCTCGGGTTCGCAGTCTCAACCCGGGTCGGGAACGAGCTCGGGGCG AACCGGCCTTTTAAAGCCAAGCTCTCCGCCGTCGTTGCCGTTTTTTTCGCCGTCCTCATGGGCTTCTCGGCGCTGGTGTT CGCCGCCGGGATGAGACACCTCTGGGGGAAAATGTTTACCGCCGACGAGGATATCTTACAGCTGACGGCGGCGGCACTGC CGATTCTGGGGCTGTGCGAGCTCGGGAACTGCCCGCAGACGGTGGGGTGCGGGGTGGTTAGGGGGACGGCGCGGCCGAGC GTGGCGGCGAACGTGAACCTGAGCGCGTTTTATCTGGTGGGGATGCCGGTGGCGGTTGGTCTTGGGTTTTGGCTCGGTGT TGGGTTTCGTGGGCTTTGGTTGGGCCTGCTTTCGGCCCAGGTATGCTGCGCGGGGCTGATGTTGTATGTGATAGGGACCA CTGATTGGGAGTGTGAAGCCCAGCGGGCCCAGCTGCTGACATTGGTTGATTACACGGATGATGATGAATCGGACGGTGTT GATTACAGAAAGATCGACGACGTGGAAAAACTGCCGTTGACCGATATTCTTACGGTGAATTGA
Protein sequence (LotjaGi4g1v0444700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCISKTEDLRFLSGTEKTCSSSCSAIVSEVKSLMVLAFPIALTALIYYSRSIVSVLFLGHLGDLELAAGSLAMAFANITG YSVLSGLSLGMEPLCSQAFGANRPKLLSLTLHRCVLFLLACSVPISFLWLNMKKIMFLLHQQPQIITMAQTYLIFSLPDL ITNSFLHPIRIYLRSQGITRPVTIASLAATLLHFPFNYLLVTRRGFGVAGVAAASAASNFSVVLFLFVYMQVTENNLTYW SRDCLSGWKPLLRLAAPSCVSVCLEWWWYEIMIVFSGLLVDPTATVASMGILIQTTSFIYVFPSSLGFAVSTRVGNELGA NRPFKAKLSAVVAVFFAVLMGFSALVFAAGMRHLWGKMFTADEDILQLTAAALPILGLCELGNCPQTVGCGVVRGTARPS VAANVNLSAFYLVGMPVAVGLGFWLGVGFRGLWLGLLSAQVCCAGLMLYVIGTTDWECEAQRAQLLTLVDYTDDDESDGV DYRKIDDVEKLPLTDILTVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 20 | 467 | 448 | 2.2E-237 | – | |
| PANTHER | 20 | 467 | 448 | 2.2E-237 | – | |
| CDD | 29 | 462 | 434 | 1.62601E-161 | – | |
| TMHMM | 35 | 57 | 23 | - | – | |
| Phobius | 36 | 59 | 24 | - | – | |
| Pfam | 39 | 199 | 161 | 8.2E-39 | ||
| TIGRFAM | 39 | 433 | 395 | 1.8E-67 | ||
| Phobius | 60 | 70 | 11 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 71 | 90 | 20 | - | – | |
| Phobius | 91 | 109 | 19 | - | – | |
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 110 | 130 | 21 | - | – | |
| Phobius | 131 | 181 | 51 | - | – | |
| TMHMM | 182 | 201 | 20 | - | – | |
| Phobius | 182 | 200 | 19 | - | – | |
| Phobius | 201 | 205 | 5 | - | – | |
| Phobius | 206 | 230 | 25 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 231 | 250 | 20 | - | – | |
| Phobius | 251 | 269 | 19 | - | – | |
| Pfam | 257 | 418 | 162 | 2.1E-33 | ||
| Phobius | 270 | 288 | 19 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 289 | 310 | 22 | - | – | |
| Phobius | 311 | 329 | 19 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 330 | 350 | 21 | - | – | |
| Phobius | 351 | 407 | 57 | - | – | |
| TMHMM | 365 | 384 | 20 | - | – | |
| TMHMM | 405 | 427 | 23 | - | – | |
| Phobius | 408 | 425 | 18 | - | – | |
| Phobius | 426 | 431 | 6 | - | – | |
| TMHMM | 431 | 453 | 23 | - | – | |
| Phobius | 432 | 452 | 21 | - | – | |
| Phobius | 453 | 500 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0444700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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