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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0446900 |
| Transcript ID | LotjaGi4g1v0446900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G77210.1 sugar transporter 14; Swiss-Prot: sp|Q8GW61|STP14_ARATH Sugar transport protein 14; TrEMBL-Plants: tr|A0A0L9VSH5|A0A0L9VSH5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0446900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81941982..81945869) extracted from Lotus japonicus Gifu genome v1.2.
CGGACGTTGACTATGTACCTTATAAATATGCATCATACGCATTTCCCCATTCTGAACTCACTGACAAAACTCAGAGAAAG AGAAGAAGAAGAAGACATAAATGGCTGGTGGAGGTATAGCAGATGGAGGACCTGGCAAAAGGGCTCATCTGTACGAGCAC AGGTTCACTCCCTATTTCGCTTTCACTTGCTTCGTTGGAGCTCTTGGTGGCTCTCTTTTTGGCTATGATCTCGGAGTTTC AGGTCTGTTTTCTATGATCTCGGTTATGAATTTCTTTTTGACACTGTTTATCTGATTCAATTTTTTCCTTGTTTTCTTTT TAATTTCACAGTAATCTCTTTGTGATCATCATTGAGATCTACAACCTCTCTTAATTTTTTTATATTCAAACCAAATTCAT GTGTTTGTCGTCATCATTGCTGTTGATGAGACCTTTTTGTATATGTTTATTATAATGAAAACCATAAATAAATAAACAAA TAAAAAAGTATAAAGTATTAGATATTGATCGCTCTTTTGATGCTGACTCAGGATTTAATCACAATTAAGACTTTCTATAC TTGGTTCAACCAGAGAGCTATTATTGCACACTCTATGTGTGTTGCTCACTAACTAAGCGGCCCTAGTGGGTAATGGAAAC CATATAATAATACACCTTTGGTAATTGGTGTACTATATTGTATAGTCCTAGCCAGTTGATTTTCAATATTTGGACTTTTT GATGTTCTGTTCACATGGGATATTGAATGCCTGACCTGTGTGTTTTGGGAGAGTATATGAAAAGTCTAGCTATGACGTAT ATGAAGACAAATGAATTGATGATTACTTTTAGGCTCTGTACCTTGTTTGTTTTTGGGATATTCCATCCAATGTGTGCATT TTCCAATCTGCCCTGGAAAACTTGTGCCGGGGTTTGGAAATATTTTTTAAAGTTGATTTTAAAATAAAAAATCAAATCAA TTATAGGAAAAAGTTTCTGCGAGTAGCATCTAGGTGCTGAATGAGTTTTGAGAAAGAAACTGATCCAAACATGCTAGAAC CACATCCAGTTTCTTTTTGGTGCAAGAACCGAACCCTGTTTCTGCATTGTCTCTTTCTATTTATTTATATATTTACTGAT TAATGGTTATTTTTTTTTTTTATTATTAGAAAATTCACCAAAAATCATTGCAGAAAGGGTTCCTGGTTCTAATATGGATC ATAAGAGTTACCTGAATGAAAAATCAAATATATCGGCTAAAAAACATTGTGGATATTCAATGTAATTTGCTAATGCAGTA GCTTCAAATTCTAAGTTTGGTACTTTACCTGCATTTTTTCCGAATGCAGAATCTATGGACTTTTAATTTTAAAGGCTTCT TCTAATATAACTTACTTTACTTGTTGTGCTCATTTGTCAGGTGGAGTGACTTCAATGGATGATTTCCTCAAGGAATTCTT TCCAAAAGTCTACAGAAGGAAGCACACGCATCTGAAGGAGACTGATTATTGTAAATATGATGATCAAATTCTGACACTGT TTACATCATCTCTCTATATCTCAGCACTATTCATGACTTTCTTTGCCTCCTACTTAACAAGAAATAAGGGAAGAAAGGCC AGTATCATAGTGGGAGCACTTAGCTTCTTGCTTGGAGCACTCCTCAATGCATTTGCAAAGAACATTGAAATGTTGATCAT TGGTAGGATCTTTCTTGGTGGAGGCATTGGATTTGACAACCAAGTAAGTGAATTGCTACAAAATACATAGATCATTAGCA TTGACAAATTAATTAGTAGAATCCAAGATTAACATGTGTATGCTTGGTTCCTCACCTCAGAATCAACTTTCACCGAGTGA AATCACTTTTGGATTATATATGCATGTTTGAATATACGGTGGAAAACCAGTGAGGCCAAATGCATGGTGCACTGTTGCAA AAGCTAAGGAAAGTTGTTTATGTCAACGTTATTTTGACATGCACATAGAGGCTTGGGAGTCATCTTAGAGAATTGATTCC AGTCCTAGAAACAATTATTTGTAGAAGCTAAAGAGAGTAGCTTCTAAGTTAGATGTAATCAATTGTGAGATTTCACAATT GGATTTTACGACACGACCTTACTGAAATCACTTTTTTTAATGAATATATCCAAATAAATCACTTCACTCTGAACTCACTT TTACCAAAATCATTTTTATCCAAAATCTATTGTGAGAAAGCCTCTCCAAACAGGCACATATATATGTTGAAAAATCTTGT TACATATTTTCTTACTGACACATCTAATTGTGCAGGCTGTTCCCTTGTACCTATCTGAAATGGCTCCAGCTAAAACCCGT GGAGCAGTGAACCAATTGTTTCAGTTCACAACCTGTGCTGGAATTCTAATTGCAAACCTTGTGAATTATTTCACTGAAAA AATTCATCCCCATGGATGGAGAATATCACTGGGTTTGGCAGGTCTTCCAGCAGTTCTTATGCTTATTGGAGGTATTCTTT GTGCTGAGACACCTAACAGTCTTGTGGAGCAAGGAAGGTTAGAGGAAGCAAGGAGGGTATTGGAGAAAGTTAGAGGAACC AAGAATGTTGATGCTGAATTTGAAGATCTTAAAGATGCAAGTGAACAGGCAAGAGCCATCACTAGTCCATTTAGGACACT CCTTAAGAGGAAGTACAGGCCCCAACTAGTAATAGGTGCCTTGGCGATTCCAGCATTCCAGCAACTAACTGGGAACAACT CCATCCTCTTCTATGCCCCTGTCATTTTCCAGAGTTTGGGGTTTGGTAACAATGCATCTCTCATTTCATCTTTCATTACC AATGGAGCTCTCCTTGTTGCCACAGTGATCTCAATGTTTTTAGTTGACAAGTTTGGTAGAAGAAAATTCTTTCTGGAAGC TGGTTTTGAAATGATATGCAGCATGGTAACTAACTTGTTTTTGTCATTTATAGCATGTGCAGATCAACTTAATTTTTCTC ACAAACAATTCTGTCCCACAAGCTACTTACTTATGACTTTAGAATCAATTGTACTGCATGTTTGGAAATTCTTATGCAGT TGATTCTGAAGTCAAAATCAATTCTAGATAGAAACTTCTGAGTGCTAGAATTGATTCTCATGAAAAAGAAGTTGATCCAA ACATGCTAGTCTCATTGAACAAATGCAATACTAATCAGTGTTGATATTGAATTGTTTATTGGACTTTTTTTTTGTTGATT TGCAGATTTGTGTTGCTGTGGTTTTGGCTGTGAAGTTTGGACATGGCGAAGAGCTTTCTAAAGGTATCAGTGCCTTCCTT GTTGTGGCAATTTTCTTGTTTGTGTTGGCATATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCAAGTGAGTTGTT CCCATTGGAGATAAGATCAGCTGCGCAGAGTATTGTGGTCTGTGTCAACATGACCTTCACTGCTCTTGTTGCACAATTGT TCCTCATGTCACTCTGTAACCTCAAATATGGAATCTTCTTGCTATTTGGTGGCTTAATTGTGGTCATGAGTTGCTTCATC TTCTTCCTTTTGCCAGAAACAAAACAAGTTCCAATCGAGGAGATTTATCTTCTTTTTGAAAACCATTGGTTCTGGAAGAA AATTGTGAGGACAAACCAAGACTTTGAGGCATCAAACGGGAAGCCAGCAATTGTTTAAGATTCCCAACAAAATAGATTGA ACATTTTTTGTTTTTGGTCAATTGTGTATGCTTTCTTTATAGGCATTTCTTATAAATATGGTTGTTTTTATGATTATTGA GACTCTTATCTTCAACAATGAGAATCTGTTAATAGTAAAACGACCATTTAATTAAGCTATTCTAAATTGAAAGAAAAATG AACAATGTAAAAAAATATTAGTTACGGAAATGCAAAAATCAGTTTTTG
CDS sequence (LotjaGi4g1v0446900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTGGAGGTATAGCAGATGGAGGACCTGGCAAAAGGGCTCATCTGTACGAGCACAGGTTCACTCCCTATTTCGC TTTCACTTGCTTCGTTGGAGCTCTTGGTGGCTCTCTTTTTGGCTATGATCTCGGAGTTTCAGGTGGAGTGACTTCAATGG ATGATTTCCTCAAGGAATTCTTTCCAAAAGTCTACAGAAGGAAGCACACGCATCTGAAGGAGACTGATTATTGTAAATAT GATGATCAAATTCTGACACTGTTTACATCATCTCTCTATATCTCAGCACTATTCATGACTTTCTTTGCCTCCTACTTAAC AAGAAATAAGGGAAGAAAGGCCAGTATCATAGTGGGAGCACTTAGCTTCTTGCTTGGAGCACTCCTCAATGCATTTGCAA AGAACATTGAAATGTTGATCATTGGTAGGATCTTTCTTGGTGGAGGCATTGGATTTGACAACCAAGCTGTTCCCTTGTAC CTATCTGAAATGGCTCCAGCTAAAACCCGTGGAGCAGTGAACCAATTGTTTCAGTTCACAACCTGTGCTGGAATTCTAAT TGCAAACCTTGTGAATTATTTCACTGAAAAAATTCATCCCCATGGATGGAGAATATCACTGGGTTTGGCAGGTCTTCCAG CAGTTCTTATGCTTATTGGAGGTATTCTTTGTGCTGAGACACCTAACAGTCTTGTGGAGCAAGGAAGGTTAGAGGAAGCA AGGAGGGTATTGGAGAAAGTTAGAGGAACCAAGAATGTTGATGCTGAATTTGAAGATCTTAAAGATGCAAGTGAACAGGC AAGAGCCATCACTAGTCCATTTAGGACACTCCTTAAGAGGAAGTACAGGCCCCAACTAGTAATAGGTGCCTTGGCGATTC CAGCATTCCAGCAACTAACTGGGAACAACTCCATCCTCTTCTATGCCCCTGTCATTTTCCAGAGTTTGGGGTTTGGTAAC AATGCATCTCTCATTTCATCTTTCATTACCAATGGAGCTCTCCTTGTTGCCACAGTGATCTCAATGTTTTTAGTTGACAA GTTTGGTAGAAGAAAATTCTTTCTGGAAGCTGGTTTTGAAATGATATGCAGCATGATTTGTGTTGCTGTGGTTTTGGCTG TGAAGTTTGGACATGGCGAAGAGCTTTCTAAAGGTATCAGTGCCTTCCTTGTTGTGGCAATTTTCTTGTTTGTGTTGGCA TATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCAAGTGAGTTGTTCCCATTGGAGATAAGATCAGCTGCGCAGAG TATTGTGGTCTGTGTCAACATGACCTTCACTGCTCTTGTTGCACAATTGTTCCTCATGTCACTCTGTAACCTCAAATATG GAATCTTCTTGCTATTTGGTGGCTTAATTGTGGTCATGAGTTGCTTCATCTTCTTCCTTTTGCCAGAAACAAAACAAGTT CCAATCGAGGAGATTTATCTTCTTTTTGAAAACCATTGGTTCTGGAAGAAAATTGTGAGGACAAACCAAGACTTTGAGGC ATCAAACGGGAAGCCAGCAATTGTTTAA
Protein sequence (LotjaGi4g1v0446900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGIADGGPGKRAHLYEHRFTPYFAFTCFVGALGGSLFGYDLGVSGGVTSMDDFLKEFFPKVYRRKHTHLKETDYCKY DDQILTLFTSSLYISALFMTFFASYLTRNKGRKASIIVGALSFLLGALLNAFAKNIEMLIIGRIFLGGGIGFDNQAVPLY LSEMAPAKTRGAVNQLFQFTTCAGILIANLVNYFTEKIHPHGWRISLGLAGLPAVLMLIGGILCAETPNSLVEQGRLEEA RRVLEKVRGTKNVDAEFEDLKDASEQARAITSPFRTLLKRKYRPQLVIGALAIPAFQQLTGNNSILFYAPVIFQSLGFGN NASLISSFITNGALLVATVISMFLVDKFGRRKFFLEAGFEMICSMICVAVVLAVKFGHGEELSKGISAFLVVAIFLFVLA YGRSWGPLGWLVPSELFPLEIRSAAQSIVVCVNMTFTALVAQLFLMSLCNLKYGIFLLFGGLIVVMSCFIFFLLPETKQV PIEEIYLLFENHWFWKKIVRTNQDFEASNGKPAIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 12 | 502 | 491 | 2.6E-288 | – | |
| PANTHER | 12 | 502 | 491 | 2.6E-288 | – | |
| Gene3D | 18 | 493 | 476 | 1.6E-118 | – | |
| SUPERFAMILY | 19 | 484 | 466 | 1.31E-59 | ||
| Phobius | 22 | 42 | 21 | - | – | |
| TIGRFAM | 23 | 485 | 463 | 1.8E-107 | ||
| TMHMM | 24 | 46 | 23 | - | – | |
| ProSiteProfiles | 29 | 478 | 450 | 44.939 | ||
| Pfam | 30 | 486 | 457 | 7.2E-116 | ||
| CDD | 32 | 476 | 445 | 0.0 | – | |
| PRINTS | 37 | 47 | 11 | 3.6E-27 | ||
| Phobius | 43 | 83 | 41 | - | – | |
| Phobius | 84 | 107 | 24 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 108 | 113 | 6 | - | – | |
| TMHMM | 114 | 133 | 20 | - | – | |
| Phobius | 114 | 133 | 20 | - | – | |
| Phobius | 134 | 138 | 5 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 139 | 161 | 23 | - | – | |
| PRINTS | 140 | 159 | 20 | 3.6E-27 | ||
| Phobius | 162 | 172 | 11 | - | – | |
| Phobius | 173 | 191 | 19 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 192 | 202 | 11 | - | – | |
| Phobius | 203 | 225 | 23 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 226 | 285 | 60 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 286 | 313 | 28 | - | – | |
| PRINTS | 297 | 307 | 11 | 3.6E-27 | ||
| Phobius | 314 | 324 | 11 | - | – | |
| TMHMM | 323 | 345 | 23 | - | – | |
| Phobius | 325 | 345 | 21 | - | – | |
| ProSitePatterns | 341 | 358 | 18 | - | ||
| Phobius | 346 | 356 | 11 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| Phobius | 357 | 376 | 20 | - | – | |
| Phobius | 377 | 381 | 5 | - | – | |
| Phobius | 382 | 402 | 21 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| PRINTS | 391 | 412 | 22 | 3.6E-27 | ||
| Phobius | 403 | 422 | 20 | - | – | |
| PRINTS | 414 | 426 | 13 | 3.6E-27 | ||
| TMHMM | 423 | 445 | 23 | - | – | |
| Phobius | 423 | 445 | 23 | - | – | |
| Phobius | 446 | 450 | 5 | - | – | |
| Phobius | 451 | 474 | 24 | - | – | |
| TMHMM | 455 | 474 | 20 | - | – | |
| Phobius | 475 | 515 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0446900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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