Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0447000 |
| Transcript ID | LotjaGi4g1v0447000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G77210.1 sugar transporter 14; Swiss-Prot: sp|Q8GW61|STP14_ARATH Sugar transport protein 14; TrEMBL-Plants: tr|A0A151T3L9|A0A151T3L9_CAJCA Sugar transport protein 14; Found in the gene: LotjaGi4g1v0447000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81956497..81959524) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAATTGTTGAGTCTATATAAACCATTTGCAAAGGGGTATCATTACCACTATTCTCTTGTCTCTCCAAACTGGCTAAT ACAAAATAGTAAGGGAGACAAAAGAATAAGTGCAGCAACATGGCAGGGGGAGCATTTGTTGATGCAGCATCTCAAAAAAG GGCTCATCTTTATGAGTACAAAATAACTGGGTACTTCATCTTTTCCTGCATTGTTGGAGCTCTTGGTGGCTCTCTCTTTG GATATGACCTTGGTGTTTCAGGTGAGAATCATATTTTTTTACATAAAAGCATGTCTCAAATTAAAACCTGAAAATGATAG AAAGCTTATTTCATTTCATGTGAAGAACAACATGAACATATCAACTTTCAAATAGCATGTTTGATTATACATTAAAATGC TTTGAAATCACTTCTGGTCAAATATCACCTTCCGAGTAAACGTGCATTGAATTTTGTGTAAATTGTGAAACCAAACATAT TATGATAGCTTAAAAATGATTACATTTTGACACTGTTTTTTTTTTATATTGTCAATGCTCTCATTGTCATAAAAATGTGA TTATAATAAACACAATATCAAAGCAAACATGACTTGAATTTTGATTGAAAAAAATAAATTGATTCAAACATATTGTTAGC TTCAGAGCAAACATGACTTGAATTTTGAAACCAAACATGCTATAAGAGACTAATGATGATTCCATTCACACGTTATAAAT TGAATTTCATTGGAAAACTAATGGATTATCTTCCCTTTTCAGGTGGAGTTACTTCCATGGATGACTTCCTGATCGAATTT TTCCCCAATGTGTATGAGAGGAAGCATGCACATCTGCAGGAGACAGATTATTGTAAATATGATGATCAGATGTTGACGCT CTTCACTTCTTCTCTGTACTTTGCTGCTTTGGTCTCCACATTTGGTGCTTCCACTGTAACAAAAAACAAAGGAAGGAGGG CCAGTATCATTTGTGGTTCCATAAGCTTCTTCGTAGGAGCTATCCTAAATGCTGCTGCTATGAACCTTACAATGTTGATC TTTGGCCGTATCCTTCTTGGTGTTGGCATTGGTTTCGGTAACCAAGTAAGTGAATGTTTGGATCAACGTTATCACAATTG ATTCCGGATAAAATTGATTTTAGTAAAATGAATGCTCCAAAATGATAAATGTTGTGTTTGTCATGAAAATGGCACTCATT AATATTATTGTACTAATTCTTGTTATTTTGTTCAGGCTGTCCCGTTGTACCTGTCAGAAATGGCTCCAGCAAAAGTAAGA GGAGCAGTGAACCAGCTTTTTCAATTGACAACTTGCTTGGGAATTTTGATTGCTAACCTTGTGAACTATGCCACTGAGCA ACTTCATCCATGGGGGTGGAGATTATCCCTTGGTTTGGCTACAGTTCCAGCAACTGTTATGTTTATTGGTGGTTTGTTGT GTCCTGAGACACCCAACAGTCTTGTGGAACAAGGAAGATTAGAAGAAGCAAGACAAGTGTTGGAGAGAGTGAGAGGTACC CCCAATGTTGATGCTGAGTATGAAGATATTGTTGAGGCCAGTGTTGAAGCACAGAAAATCAAGAACCCATTCCAGAACCT TCTCTTGAAAAAGAACAGGCCCCAGTTTGTGATTGGTGCCTTGGCCATTCCTGCATTCCAGCAGCTTACTGGCAACAACT CCATCCTCTTCTATGCCCCTGTCATTTTCCAGACTCTTGGCTTTGGCTCTGGTGCCTCCTTGTATTCTTCTCTTATCACA AGTGTTGCACTTGTTCTTGCCACTTTGATCTCCATGTTCTATGTTGACAAGTTTGGCAGGAGAGCTTTCTTTTTGGAAGC TGGTGTTGAAATGTTGTTGTGCATGGTAACTAACTAACTACTTTTCAACGCACACCACCTTTAATTTTGTCCTAGTGTCA ATCCCTTTTTATAGGAATTTGAATTCCTTAGGAAATTCTAAATTCAGTCAAGTCTTGAAACTTCAGTCGTCGGAACAAAG ATCCTACGGTTCAAATATAAAGAGACTATCTCTTTAAGCTTGAGTCATTTGATCAAGGTCGGACGACTGAGGATCCCCAG CTGACTTGACTACATTAAATCCATGATTCCTGGACTACGGCCGGTTACTTGCCTTTATTTTTTTCCTTCACTGCATTGAA TTGAATCTAAGTTTGATCTAATGTACTTTGCAGGTTGCTACAGCAGTTGTGTTGGCTCTAGAGTTTGGAAAAGGCAAAGA ACTGTCATTTGGAGTGAGTGTGTTCCTAGTGGTTGTTATTTTCATGTTTGTGTTGGCATATGGAAGGTCATGGGGTCCTC TAGGGTGGTTGGTTCCTAGTGAGTTGTTCCCACTAGAGATCAGGTCAGCAGCACAGAGTGTTGTGGTGTGTGTTAACATG ATCTTCACAGCTCTTGTTGCGCAATTGTTCCTCATGTCACTTTGCCACCTTAAGTATGGAATCTTCTTGCTGTTTGCTGG CTTGATTCTGGTGATGAGTTGCTTTGTGTTCTTCTTGTTGCCGGAAACAAAACAAGTCCCTATTGAGGAGATTTATCTTT TGTTTGAGACTCATTGGTTCTGGAAGAAAGTGGTAGGTGACTCAAACAACCCACAGAGAACAAATGGACAAGCATAAGCA AATCCTTGACCCTTGTATGTGTGTGCCAATGTAAATGTAATGTGATTGATTGATAAATGGGTGGAGCTAGCTGGCATTGG AATTGGAAGTGTAATTAAGAAGAATGAAAAAACAGCTTGCTATAGCCGCTTTTGATTATTGGAATTGGTTTTTTATTCCT TTTTGTTTTATACAATTTTGTTTTAGTGAGGGAAAGCTCAATCGAGCTGAAACAAAAGTGTATAAATGATTAGTCGACGC TCTTTTGGACGTTGACATACATGAATCATGAAAGGTGTCATCTTTTCTTTTGTTTTTTAATTATGATCTCTCTTATTTTC ACACACAACAACCTTTTTTCATGCTTACTTTCTATTGCAAGATATCATAAAGGCAAAGGGTATCACCT
CDS sequence (LotjaGi4g1v0447000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGGGGAGCATTTGTTGATGCAGCATCTCAAAAAAGGGCTCATCTTTATGAGTACAAAATAACTGGGTACTTCAT CTTTTCCTGCATTGTTGGAGCTCTTGGTGGCTCTCTCTTTGGATATGACCTTGGTGTTTCAGGTGGAGTTACTTCCATGG ATGACTTCCTGATCGAATTTTTCCCCAATGTGTATGAGAGGAAGCATGCACATCTGCAGGAGACAGATTATTGTAAATAT GATGATCAGATGTTGACGCTCTTCACTTCTTCTCTGTACTTTGCTGCTTTGGTCTCCACATTTGGTGCTTCCACTGTAAC AAAAAACAAAGGAAGGAGGGCCAGTATCATTTGTGGTTCCATAAGCTTCTTCGTAGGAGCTATCCTAAATGCTGCTGCTA TGAACCTTACAATGTTGATCTTTGGCCGTATCCTTCTTGGTGTTGGCATTGGTTTCGGTAACCAAGCTGTCCCGTTGTAC CTGTCAGAAATGGCTCCAGCAAAAGTAAGAGGAGCAGTGAACCAGCTTTTTCAATTGACAACTTGCTTGGGAATTTTGAT TGCTAACCTTGTGAACTATGCCACTGAGCAACTTCATCCATGGGGGTGGAGATTATCCCTTGGTTTGGCTACAGTTCCAG CAACTGTTATGTTTATTGGTGGTTTGTTGTGTCCTGAGACACCCAACAGTCTTGTGGAACAAGGAAGATTAGAAGAAGCA AGACAAGTGTTGGAGAGAGTGAGAGGTACCCCCAATGTTGATGCTGAGTATGAAGATATTGTTGAGGCCAGTGTTGAAGC ACAGAAAATCAAGAACCCATTCCAGAACCTTCTCTTGAAAAAGAACAGGCCCCAGTTTGTGATTGGTGCCTTGGCCATTC CTGCATTCCAGCAGCTTACTGGCAACAACTCCATCCTCTTCTATGCCCCTGTCATTTTCCAGACTCTTGGCTTTGGCTCT GGTGCCTCCTTGTATTCTTCTCTTATCACAAGTGTTGCACTTGTTCTTGCCACTTTGATCTCCATGTTCTATGTTGACAA GTTTGGCAGGAGAGCTTTCTTTTTGGAAGCTGGTGTTGAAATGTTGTTGTGCATGGTTGCTACAGCAGTTGTGTTGGCTC TAGAGTTTGGAAAAGGCAAAGAACTGTCATTTGGAGTGAGTGTGTTCCTAGTGGTTGTTATTTTCATGTTTGTGTTGGCA TATGGAAGGTCATGGGGTCCTCTAGGGTGGTTGGTTCCTAGTGAGTTGTTCCCACTAGAGATCAGGTCAGCAGCACAGAG TGTTGTGGTGTGTGTTAACATGATCTTCACAGCTCTTGTTGCGCAATTGTTCCTCATGTCACTTTGCCACCTTAAGTATG GAATCTTCTTGCTGTTTGCTGGCTTGATTCTGGTGATGAGTTGCTTTGTGTTCTTCTTGTTGCCGGAAACAAAACAAGTC CCTATTGAGGAGATTTATCTTTTGTTTGAGACTCATTGGTTCTGGAAGAAAGTGGTAGGTGACTCAAACAACCCACAGAG AACAAATGGACAAGCATAA
Protein sequence (LotjaGi4g1v0447000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGAFVDAASQKRAHLYEYKITGYFIFSCIVGALGGSLFGYDLGVSGGVTSMDDFLIEFFPNVYERKHAHLQETDYCKY DDQMLTLFTSSLYFAALVSTFGASTVTKNKGRRASIICGSISFFVGAILNAAAMNLTMLIFGRILLGVGIGFGNQAVPLY LSEMAPAKVRGAVNQLFQLTTCLGILIANLVNYATEQLHPWGWRLSLGLATVPATVMFIGGLLCPETPNSLVEQGRLEEA RQVLERVRGTPNVDAEYEDIVEASVEAQKIKNPFQNLLLKKNRPQFVIGALAIPAFQQLTGNNSILFYAPVIFQTLGFGS GASLYSSLITSVALVLATLISMFYVDKFGRRAFFLEAGVEMLLCMVATAVVLALEFGKGKELSFGVSVFLVVVIFMFVLA YGRSWGPLGWLVPSELFPLEIRSAAQSVVVCVNMIFTALVAQLFLMSLCHLKYGIFLLFAGLILVMSCFVFFLLPETKQV PIEEIYLLFETHWFWKKVVGDSNNPQRTNGQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 12 | 502 | 491 | 5.3E-261 | – | |
| PANTHER | 12 | 502 | 491 | 5.3E-261 | – | |
| Gene3D | 18 | 492 | 475 | 9.4E-114 | – | |
| TIGRFAM | 21 | 485 | 465 | 7.0E-106 | ||
| Phobius | 22 | 42 | 21 | - | – | |
| TMHMM | 24 | 46 | 23 | - | – | |
| ProSiteProfiles | 29 | 478 | 450 | 45.045 | ||
| Pfam | 30 | 486 | 457 | 1.7E-114 | ||
| CDD | 32 | 476 | 445 | 0.0 | – | |
| PRINTS | 37 | 47 | 11 | 2.4E-28 | ||
| Phobius | 43 | 83 | 41 | - | – | |
| SUPERFAMILY | 77 | 484 | 408 | 7.32E-57 | ||
| Phobius | 84 | 102 | 19 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 103 | 113 | 11 | - | – | |
| Phobius | 114 | 134 | 21 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 135 | 139 | 5 | - | – | |
| Phobius | 140 | 161 | 22 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| PRINTS | 140 | 159 | 20 | 2.4E-28 | ||
| ProSitePatterns | 145 | 170 | 26 | - | ||
| Phobius | 162 | 172 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 173 | 195 | 23 | - | – | |
| Phobius | 196 | 200 | 5 | - | – | |
| Phobius | 201 | 224 | 24 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 225 | 285 | 61 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 286 | 312 | 27 | - | – | |
| PRINTS | 297 | 307 | 11 | 2.4E-28 | ||
| Phobius | 313 | 323 | 11 | - | – | |
| TMHMM | 323 | 345 | 23 | - | – | |
| Phobius | 324 | 345 | 22 | - | – | |
| ProSitePatterns | 341 | 358 | 18 | - | ||
| Phobius | 346 | 356 | 11 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| Phobius | 357 | 376 | 20 | - | – | |
| Phobius | 377 | 381 | 5 | - | – | |
| Phobius | 382 | 402 | 21 | - | – | |
| TMHMM | 384 | 406 | 23 | - | – | |
| PRINTS | 391 | 412 | 22 | 2.4E-28 | ||
| Phobius | 403 | 422 | 20 | - | – | |
| PRINTS | 414 | 426 | 13 | 2.4E-28 | ||
| Phobius | 423 | 445 | 23 | - | – | |
| TMHMM | 427 | 449 | 23 | - | – | |
| Phobius | 446 | 450 | 5 | - | – | |
| Phobius | 451 | 474 | 24 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 475 | 512 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0447000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…